RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 PTPRKQ15262 1439 aa10.22□□□□□ -0.77
SDF2-205ENST00000587629 ZNF335Q9H4Z2 1342 aaPredicted RBP10.21□□□□□ -0.78
SDF2-205ENST00000587629 DHX29Q7Z478 1369 aaKnown RBP10.21□□□□□ -0.78
SDF2-205ENST00000587629 NCOA2Q15596 1464 aa10.21□□□□□ -0.78
SDF2-205ENST00000587629 RTEL1-TNFRSF6BF6WH68 1400 aa10.2□□□□□ -0.78
SDF2-205ENST00000587629 LTBP4Q8N2S1 1624 aa10.2□□□□□ -0.78
SDF2-205ENST00000587629 ADGBQ8N7X0 1667 aa10.2□□□□□ -0.78
SDF2-205ENST00000587629 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
SDF2-205ENST00000587629 CAMSAP2Q08AD1 1489 aa10.19□□□□□ -0.78
SDF2-205ENST00000587629 WASHC2CQ9Y4E1 1318 aa10.19□□□□□ -0.78
SDF2-205ENST00000587629 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
SDF2-205ENST00000587629 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
SDF2-205ENST00000587629 TSPY4P0CV99 314 aa10.18□□□□□ -0.78
SDF2-205ENST00000587629 TSPY10P0CW01 314 aa10.18□□□□□ -0.78
SDF2-205ENST00000587629 PKD2Q13563 968 aa10.18□□□□□ -0.78
SDF2-205ENST00000587629 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
SDF2-205ENST00000587629 UBAP1LF5GYI3 381 aa10.17□□□□□ -0.78
SDF2-205ENST00000587629 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
SDF2-205ENST00000587629 RSPH4AQ5TD94 716 aa10.17□□□□□ -0.78
SDF2-205ENST00000587629 TNRQ92752 1358 aa10.16□□□□□ -0.78
SDF2-205ENST00000587629 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
SDF2-205ENST00000587629 A2ML1A8K2U0 1454 aa10.15□□□□□ -0.78
SDF2-205ENST00000587629 PLA2R1Q13018 1463 aa10.15□□□□□ -0.78
SDF2-205ENST00000587629 LRRC9Q6ZRR7 1453 aa10.15□□□□□ -0.78
SDF2-205ENST00000587629 ZNF142P52746 1687 aaPredicted RBP10.15□□□□□ -0.79
SDF2-205ENST00000587629 VPS8Q8N3P4 1428 aa10.15□□□□□ -0.79
SDF2-205ENST00000587629 TCOF1Q13428 1488 aaKnown RBP10.14□□□□□ -0.79
SDF2-205ENST00000587629 KDM5DQ9BY66 1539 aa10.13□□□□□ -0.79
SDF2-205ENST00000587629 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
SDF2-205ENST00000587629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.13□□□□□ -0.79
SDF2-205ENST00000587629 IQSEC2Q5JU85 1478 aa10.12□□□□□ -0.79
SDF2-205ENST00000587629 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
SDF2-205ENST00000587629 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
SDF2-205ENST00000587629 PZPP20742 1482 aa10.11□□□□□ -0.79
SDF2-205ENST00000587629 MIA2Q96PC5 1412 aa10.11□□□□□ -0.79
SDF2-205ENST00000587629 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
SDF2-205ENST00000587629 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
SDF2-205ENST00000587629 MYOM3Q5VTT5 1437 aa10.09□□□□□ -0.79
SDF2-205ENST00000587629 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
SDF2-205ENST00000587629 APLP2Q06481 763 aa10.08□□□□□ -0.8
SDF2-205ENST00000587629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
SDF2-205ENST00000587629 SPATA31D1Q6ZQQ2 1576 aa10.08□□□□□ -0.8
SDF2-205ENST00000587629 NEURL4Q96JN8 1562 aa10.08□□□□□ -0.8
SDF2-205ENST00000587629 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
SDF2-205ENST00000587629 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
SDF2-205ENST00000587629 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
SDF2-205ENST00000587629 SOCS7O14512 581 aa10.07□□□□□ -0.8
SDF2-205ENST00000587629 ABCC3O15438 1527 aa10.07□□□□□ -0.8
SDF2-205ENST00000587629 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
SDF2-205ENST00000587629 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
SDF2-205ENST00000587629 TOM1O60784 492 aa10.06□□□□□ -0.8
SDF2-205ENST00000587629 HSPA1LP34931 641 aa10.06□□□□□ -0.8
SDF2-205ENST00000587629 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
SDF2-205ENST00000587629 POLR1AO95602 1720 aaPredicted RBP10.06□□□□□ -0.8
SDF2-205ENST00000587629 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
SDF2-205ENST00000587629 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
SDF2-205ENST00000587629 RNF17Q9BXT8 1623 aaKnown RBP10.04□□□□□ -0.8
SDF2-205ENST00000587629 KIF15Q9NS87 1388 aa10.04□□□□□ -0.8
SDF2-205ENST00000587629 ABCC5O15440 1437 aa10.04□□□□□ -0.8
SDF2-205ENST00000587629 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
SDF2-205ENST00000587629 CPS1P31327 1500 aa10.03□□□□□ -0.8
SDF2-205ENST00000587629 DUOX2Q9NRD8 1548 aa10.03□□□□□ -0.8
SDF2-205ENST00000587629 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
SDF2-205ENST00000587629 CFAP65Q6ZU64 1925 aaKnown RBP10.03□□□□□ -0.8
SDF2-205ENST00000587629 MROH1Q8NDA8 1641 aa10.03□□□□□ -0.8
SDF2-205ENST00000587629 CEP152O94986 1710 aa10.02□□□□□ -0.8
SDF2-205ENST00000587629 LTKP29376 864 aa10.02□□□□□ -0.81
SDF2-205ENST00000587629 TXNDC2Q86VQ3 553 aa10.02□□□□□ -0.81
SDF2-205ENST00000587629 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.81
SDF2-205ENST00000587629 MED14O60244 1454 aa10.02□□□□□ -0.81
SDF2-205ENST00000587629 PTPN23Q9H3S7 1636 aa10.01□□□□□ -0.81
SDF2-205ENST00000587629 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
SDF2-205ENST00000587629 ZC3H13Q5T200 1668 aaKnown RBP10.01□□□□□ -0.81
SDF2-205ENST00000587629 DEPDC5O75140 1603 aa10□□□□□ -0.81
SDF2-205ENST00000587629 DAPK1P53355 1430 aa10□□□□□ -0.81
SDF2-205ENST00000587629 IQGAP1P46940 1657 aa10□□□□□ -0.81
SDF2-205ENST00000587629 FAM50AQ14320 339 aaKnown RBP10□□□□□ -0.81
SDF2-205ENST00000587629 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
SDF2-205ENST00000587629 KANK1Q14678 1352 aa10□□□□□ -0.81
SDF2-205ENST00000587629 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
SDF2-205ENST00000587629 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
SDF2-205ENST00000587629 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
SDF2-205ENST00000587629 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
SDF2-205ENST00000587629 UBR1Q8IWV7 1749 aa9.98□□□□□ -0.81
SDF2-205ENST00000587629 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
SDF2-205ENST00000587629 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
SDF2-205ENST00000587629 CROCC2H7BZ55 1655 aa9.97□□□□□ -0.81
SDF2-205ENST00000587629 STRCP1A6NGW2 1772 aa9.97□□□□□ -0.81
SDF2-205ENST00000587629 IDI1Q13907 227 aa9.97□□□□□ -0.81
SDF2-205ENST00000587629 ARHGAP31Q2M1Z3 1444 aa9.97□□□□□ -0.81
SDF2-205ENST00000587629 PRDM15P57071 1507 aaPredicted RBP9.97□□□□□ -0.81
SDF2-205ENST00000587629 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
SDF2-205ENST00000587629 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
SDF2-205ENST00000587629 BCANQ96GW7 911 aa9.95□□□□□ -0.82
SDF2-205ENST00000587629 SLC26A8Q96RN1 970 aa9.95□□□□□ -0.82
SDF2-205ENST00000587629 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
SDF2-205ENST00000587629 ARHGAP23Q9P227 1491 aa9.95□□□□□ -0.82
SDF2-205ENST00000587629 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
SDF2-205ENST00000587629 PIK3C2BO00750 1634 aa9.95□□□□□ -0.82
SDF2-205ENST00000587629 SLIT1O75093 1534 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms