RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 UNC13BO14795 1591 aa15.35■□□□□ 0.05
CLPTM1-207ENST00000587537 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
CLPTM1-207ENST00000587537 YEATS2Q9ULM3 1422 aa15.34■□□□□ 0.05
CLPTM1-207ENST00000587537 RNF17Q9BXT8 1623 aaKnown RBP15.34■□□□□ 0.05
CLPTM1-207ENST00000587537 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.05
CLPTM1-207ENST00000587537 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
CLPTM1-207ENST00000587537 FOXD1Q16676 465 aa15.32■□□□□ 0.04
CLPTM1-207ENST00000587537 KANK1Q14678 1352 aa15.31■□□□□ 0.04
CLPTM1-207ENST00000587537 PRDM15P57071 1507 aaPredicted RBP15.31■□□□□ 0.04
CLPTM1-207ENST00000587537 ZC3H13Q5T200 1668 aaKnown RBP15.28■□□□□ 0.04
CLPTM1-207ENST00000587537 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
CLPTM1-207ENST00000587537 KIF3BO15066 747 aa15.28■□□□□ 0.04
CLPTM1-207ENST00000587537 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.04
CLPTM1-207ENST00000587537 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
CLPTM1-207ENST00000587537 LMTK2Q8IWU2 1503 aa15.26■□□□□ 0.03
CLPTM1-207ENST00000587537 NUP155O75694 1391 aa15.25■□□□□ 0.03
CLPTM1-207ENST00000587537 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
CLPTM1-207ENST00000587537 MROH1Q8NDA8 1641 aa15.24■□□□□ 0.03
CLPTM1-207ENST00000587537 TET3O43151 1660 aa15.22■□□□□ 0.03
CLPTM1-207ENST00000587537 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
CLPTM1-207ENST00000587537 PZPP20742 1482 aa15.2■□□□□ 0.02
CLPTM1-207ENST00000587537 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
CLPTM1-207ENST00000587537 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
CLPTM1-207ENST00000587537 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
CLPTM1-207ENST00000587537 MPHOSPH9Q99550 1183 aa15.19■□□□□ 0.02
CLPTM1-207ENST00000587537 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 ABCC3O15438 1527 aa15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 GGT6Q6P531 493 aa15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
CLPTM1-207ENST00000587537 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
CLPTM1-207ENST00000587537 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
CLPTM1-207ENST00000587537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.024e-7■■□□□ 12.8
CLPTM1-207ENST00000587537 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
CLPTM1-207ENST00000587537 CEP152O94986 1710 aa15.15■□□□□ 0.02
CLPTM1-207ENST00000587537 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
CLPTM1-207ENST00000587537 PKD2Q13563 968 aa15.13■□□□□ 0.01
CLPTM1-207ENST00000587537 E9PCH4 1651 aa15.12■□□□□ 0.01
CLPTM1-207ENST00000587537 FER1L4A9Z1Z3 1794 aa15.12■□□□□ 0.01
CLPTM1-207ENST00000587537 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
CLPTM1-207ENST00000587537 ADAMTSL3P82987 1691 aa15.1■□□□□ 0.01
CLPTM1-207ENST00000587537 SPHKAPQ2M3C7 1700 aa15.1■□□□□ 0.01
CLPTM1-207ENST00000587537 PTPRTO14522 1441 aa15.09■□□□□ 0.01
CLPTM1-207ENST00000587537 ANKRD30BQ9BXX2 1392 aa15.09■□□□□ 0.01
CLPTM1-207ENST00000587537 NPATQ14207 1427 aa15.09■□□□□ 0.01
CLPTM1-207ENST00000587537 TRPM2O94759 1503 aa15.08■□□□□ 0.01
CLPTM1-207ENST00000587537 MLECQ14165 292 aa15.07■□□□□ 0
CLPTM1-207ENST00000587537 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
CLPTM1-207ENST00000587537 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
CLPTM1-207ENST00000587537 ZMYM3Q14202 1370 aa15.05■□□□□ -0
CLPTM1-207ENST00000587537 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
CLPTM1-207ENST00000587537 NOS1P29475 1434 aa15.05■□□□□ -0
CLPTM1-207ENST00000587537 NEURL4Q96JN8 1562 aa15.05■□□□□ -0
CLPTM1-207ENST00000587537 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
CLPTM1-207ENST00000587537 MADDQ8WXG6 1647 aa15.04■□□□□ -0
CLPTM1-207ENST00000587537 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
CLPTM1-207ENST00000587537 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
CLPTM1-207ENST00000587537 ERVK-7P63135 1459 aa15.02■□□□□ -0
CLPTM1-207ENST00000587537 C3P01024 1663 aa15.02□□□□□ -0.01
CLPTM1-207ENST00000587537 RIMS1Q86UR5 1692 aaKnown RBP15.01□□□□□ -0.01
CLPTM1-207ENST00000587537 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CLPTM1-207ENST00000587537 PIK3C2BO00750 1634 aa15□□□□□ -0.01
CLPTM1-207ENST00000587537 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
CLPTM1-207ENST00000587537 KIF1BO60333 1816 aa14.99□□□□□ -0.01
CLPTM1-207ENST00000587537 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
CLPTM1-207ENST00000587537 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
CLPTM1-207ENST00000587537 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
CLPTM1-207ENST00000587537 SYNMO15061 1565 aa14.98□□□□□ -0.01
CLPTM1-207ENST00000587537 CFAP65Q6ZU64 1925 aaKnown RBP14.98□□□□□ -0.01
CLPTM1-207ENST00000587537 TNRQ92752 1358 aa14.97□□□□□ -0.01
CLPTM1-207ENST00000587537 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
CLPTM1-207ENST00000587537 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
CLPTM1-207ENST00000587537 PTPRMP28827 1452 aa14.95□□□□□ -0.02
CLPTM1-207ENST00000587537 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
CLPTM1-207ENST00000587537 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
CLPTM1-207ENST00000587537 SPATA31E1Q6ZUB1 1445 aa14.92□□□□□ -0.02
CLPTM1-207ENST00000587537 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
CLPTM1-207ENST00000587537 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
CLPTM1-207ENST00000587537 SIN3AQ96ST3 1273 aa14.9□□□□□ -0.02
CLPTM1-207ENST00000587537 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-207ENST00000587537 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
CLPTM1-207ENST00000587537 MYO3AQ8NEV4 1616 aa14.89□□□□□ -0.03
CLPTM1-207ENST00000587537 IDI1Q13907 227 aa14.89□□□□□ -0.03
CLPTM1-207ENST00000587537 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CLPTM1-207ENST00000587537 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
CLPTM1-207ENST00000587537 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
CLPTM1-207ENST00000587537 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
CLPTM1-207ENST00000587537 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
CLPTM1-207ENST00000587537 UBR1Q8IWV7 1749 aa14.86□□□□□ -0.03
CLPTM1-207ENST00000587537 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
CLPTM1-207ENST00000587537 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
CLPTM1-207ENST00000587537 MYOM2P54296 1465 aa14.85□□□□□ -0.03
CLPTM1-207ENST00000587537 CEBPAP49715 358 aaPredicted RBP14.85□□□□□ -0.03
CLPTM1-207ENST00000587537 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
CLPTM1-207ENST00000587537 ZFYVE9O95405 1425 aa14.84□□□□□ -0.03
CLPTM1-207ENST00000587537 KDM4FA0A1W2PPD8 638 aa14.84□□□□□ -0.03
CLPTM1-207ENST00000587537 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
CLPTM1-207ENST00000587537 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms