RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
PRKCSH-206ENST00000587509 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-206ENST00000587509 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-206ENST00000587509 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
PRKCSH-206ENST00000587509 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-206ENST00000587509 CEBPAP49715 358 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-206ENST00000587509 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
PRKCSH-206ENST00000587509 WASHC2CQ9Y4E1 1318 aa17.99■□□□□ 0.47
PRKCSH-206ENST00000587509 ADGRL2O95490 1459 aa17.98■□□□□ 0.47
PRKCSH-206ENST00000587509 PZPP20742 1482 aa17.96■□□□□ 0.47
PRKCSH-206ENST00000587509 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-206ENST00000587509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKCSH-206ENST00000587509 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
PRKCSH-206ENST00000587509 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
PRKCSH-206ENST00000587509 KANK1Q14678 1352 aa17.94■□□□□ 0.46
PRKCSH-206ENST00000587509 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
PRKCSH-206ENST00000587509 ABCC3O15438 1527 aa17.93■□□□□ 0.46
PRKCSH-206ENST00000587509 NCOA1Q15788 1441 aa17.93■□□□□ 0.46
PRKCSH-206ENST00000587509 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-206ENST00000587509 HSPA2P54652 639 aa17.92■□□□□ 0.46
PRKCSH-206ENST00000587509 DEPDC5O75140 1603 aa17.91■□□□□ 0.46
PRKCSH-206ENST00000587509 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
PRKCSH-206ENST00000587509 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
PRKCSH-206ENST00000587509 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-206ENST00000587509 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
PRKCSH-206ENST00000587509 TNRQ92752 1358 aa17.9■□□□□ 0.46
PRKCSH-206ENST00000587509 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
PRKCSH-206ENST00000587509 CAMSAP1Q5T5Y3 1602 aa17.88■□□□□ 0.45
PRKCSH-206ENST00000587509 ANKRD50Q9ULJ7 1429 aa17.88■□□□□ 0.45
PRKCSH-206ENST00000587509 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
PRKCSH-206ENST00000587509 A2ML1A8K2U0 1454 aa17.87■□□□□ 0.45
PRKCSH-206ENST00000587509 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-206ENST00000587509 CEP152O94986 1710 aa17.86■□□□□ 0.45
PRKCSH-206ENST00000587509 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
PRKCSH-206ENST00000587509 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-206ENST00000587509 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
PRKCSH-206ENST00000587509 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.45
PRKCSH-206ENST00000587509 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
PRKCSH-206ENST00000587509 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
PRKCSH-206ENST00000587509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.449e-11■□□□□ 8.5
PRKCSH-206ENST00000587509 VWDEQ8N2E2 1590 aa17.8■□□□□ 0.44
PRKCSH-206ENST00000587509 PTPRTO14522 1441 aa17.8■□□□□ 0.44
PRKCSH-206ENST00000587509 EFCAB6Q5THR3 1501 aa17.79■□□□□ 0.44
PRKCSH-206ENST00000587509 ITGAEP38570 1179 aa17.79■□□□□ 0.44
PRKCSH-206ENST00000587509 UNC13BO14795 1591 aa17.79■□□□□ 0.44
PRKCSH-206ENST00000587509 PKD2Q13563 968 aa17.78■□□□□ 0.44
PRKCSH-206ENST00000587509 FBXO31Q5XUX0 539 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-206ENST00000587509 STRCQ7RTU9 1775 aa17.78■□□□□ 0.44
PRKCSH-206ENST00000587509 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
PRKCSH-206ENST00000587509 RPRD2Q5VT52 1461 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-206ENST00000587509 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-206ENST00000587509 TET3O43151 1660 aa17.74■□□□□ 0.43
PRKCSH-206ENST00000587509 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-206ENST00000587509 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
PRKCSH-206ENST00000587509 IQGAP3Q86VI3 1631 aa17.71■□□□□ 0.43
PRKCSH-206ENST00000587509 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
PRKCSH-206ENST00000587509 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
PRKCSH-206ENST00000587509 KDM5AP29375 1690 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-206ENST00000587509 NUP155O75694 1391 aa17.67■□□□□ 0.42
PRKCSH-206ENST00000587509 HFM1A2PYH4 1435 aa17.67■□□□□ 0.42
PRKCSH-206ENST00000587509 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
PRKCSH-206ENST00000587509 NOS1P29475 1434 aa17.66■□□□□ 0.42
PRKCSH-206ENST00000587509 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
PRKCSH-206ENST00000587509 SLC52A1Q9NWF4 448 aa17.65■□□□□ 0.42
PRKCSH-206ENST00000587509 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.42
PRKCSH-206ENST00000587509 NAIPQ13075 1403 aa17.64■□□□□ 0.42
PRKCSH-206ENST00000587509 ADGRB3O60242 1522 aa17.64■□□□□ 0.41
PRKCSH-206ENST00000587509 SYNMO15061 1565 aa17.64■□□□□ 0.41
PRKCSH-206ENST00000587509 PIK3C2BO00750 1634 aa17.64■□□□□ 0.41
PRKCSH-206ENST00000587509 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
PRKCSH-206ENST00000587509 MED14O60244 1454 aa17.63■□□□□ 0.41
PRKCSH-206ENST00000587509 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-206ENST00000587509 SLIT1O75093 1534 aa17.62■□□□□ 0.41
PRKCSH-206ENST00000587509 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
PRKCSH-206ENST00000587509 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-206ENST00000587509 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
PRKCSH-206ENST00000587509 CERKQ8TCT0 537 aa17.61■□□□□ 0.41
PRKCSH-206ENST00000587509 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
PRKCSH-206ENST00000587509 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
PRKCSH-206ENST00000587509 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-206ENST00000587509 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
PRKCSH-206ENST00000587509 E9PCH4 1651 aa17.6■□□□□ 0.41
PRKCSH-206ENST00000587509 TMEM2Q9UHN6 1383 aa17.58■□□□□ 0.4
PRKCSH-206ENST00000587509 CPS1P31327 1500 aa17.57■□□□□ 0.4
PRKCSH-206ENST00000587509 IDI1Q13907 227 aa17.56■□□□□ 0.4
PRKCSH-206ENST00000587509 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
PRKCSH-206ENST00000587509 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-206ENST00000587509 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-206ENST00000587509 ZNF335Q9H4Z2 1342 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-206ENST00000587509 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
PRKCSH-206ENST00000587509 SPHKAPQ2M3C7 1700 aa17.54■□□□□ 0.4
PRKCSH-206ENST00000587509 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
PRKCSH-206ENST00000587509 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-206ENST00000587509 TRPM2O94759 1503 aa17.51■□□□□ 0.39
PRKCSH-206ENST00000587509 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
PRKCSH-206ENST00000587509 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
PRKCSH-206ENST00000587509 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRKCSH-206ENST00000587509 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
PRKCSH-206ENST00000587509 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
PRKCSH-206ENST00000587509 LTKP29376 864 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms