RNA–Protein interactions for RNA: ENST00000587479.2

RANBP3-211, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-211ENST00000587479 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
RANBP3-211ENST00000587479 SHANK2Q9UPX8 1470 aa24.53■■□□□ 1.52
RANBP3-211ENST00000587479 WASHC2CQ9Y4E1 1318 aa24.53■■□□□ 1.52
RANBP3-211ENST00000587479 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
RANBP3-211ENST00000587479 TCOF1Q13428 1488 aaKnown RBP24.52■■□□□ 1.52
RANBP3-211ENST00000587479 DNMT1P26358 1616 aaKnown RBP24.52■■□□□ 1.52
RANBP3-211ENST00000587479 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
RANBP3-211ENST00000587479 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
RANBP3-211ENST00000587479 ABCC5O15440 1437 aa24.5■■□□□ 1.51
RANBP3-211ENST00000587479 DAPK1P53355 1430 aa24.49■■□□□ 1.51
RANBP3-211ENST00000587479 CEP170BQ9Y4F5 1589 aaPredicted RBP24.49■■□□□ 1.51
RANBP3-211ENST00000587479 ZC3H13Q5T200 1668 aaKnown RBP24.48■■□□□ 1.51
RANBP3-211ENST00000587479 CAMSAP1Q5T5Y3 1602 aa24.48■■□□□ 1.51
RANBP3-211ENST00000587479 FBXO41Q8TF61 875 aa24.48■■□□□ 1.51
RANBP3-211ENST00000587479 PZPP20742 1482 aa24.47■■□□□ 1.51
RANBP3-211ENST00000587479 NCOA1Q15788 1441 aa24.47■■□□□ 1.51
RANBP3-211ENST00000587479 PTPRTO14522 1441 aa24.46■■□□□ 1.51
RANBP3-211ENST00000587479 KIF15Q9NS87 1388 aa24.45■■□□□ 1.5
RANBP3-211ENST00000587479 TNRQ92752 1358 aa24.43■■□□□ 1.5
RANBP3-211ENST00000587479 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
RANBP3-211ENST00000587479 A2ML1A8K2U0 1454 aa24.42■■□□□ 1.5
RANBP3-211ENST00000587479 ABCC3O15438 1527 aa24.41■■□□□ 1.5
RANBP3-211ENST00000587479 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
RANBP3-211ENST00000587479 MROH1Q8NDA8 1641 aa24.41■■□□□ 1.5
RANBP3-211ENST00000587479 ERBINQ96RT1 1412 aa24.41■■□□□ 1.5
RANBP3-211ENST00000587479 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
RANBP3-211ENST00000587479 CERKQ8TCT0 537 aa24.4■■□□□ 1.5
RANBP3-211ENST00000587479 ANKRD30AQ9BXX3 1397 aa24.4■■□□□ 1.5
RANBP3-211ENST00000587479 CEP152O94986 1710 aa24.39■■□□□ 1.5
RANBP3-211ENST00000587479 FAM50AQ14320 339 aaKnown RBP24.38■■□□□ 1.49
RANBP3-211ENST00000587479 PKD2Q13563 968 aa24.37■■□□□ 1.49
RANBP3-211ENST00000587479 CHIC2Q9UKJ5 165 aa24.37■■□□□ 1.49
RANBP3-211ENST00000587479 PRDM15P57071 1507 aaPredicted RBP24.35■■□□□ 1.49
RANBP3-211ENST00000587479 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
RANBP3-211ENST00000587479 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
RANBP3-211ENST00000587479 DEPDC5O75140 1603 aa24.33■■□□□ 1.49
RANBP3-211ENST00000587479 SPATA31D1Q6ZQQ2 1576 aa24.32■■□□□ 1.48
RANBP3-211ENST00000587479 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
RANBP3-211ENST00000587479 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
RANBP3-211ENST00000587479 KANK1Q14678 1352 aa24.31■■□□□ 1.48
RANBP3-211ENST00000587479 POLR1AO95602 1720 aaPredicted RBP24.3■■□□□ 1.48
RANBP3-211ENST00000587479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.482e-7■□□□□ 10.3
RANBP3-211ENST00000587479 ERVK-7P63135 1459 aa24.29■■□□□ 1.48
RANBP3-211ENST00000587479 THEMISQ8N1K5 641 aaPredicted RBP24.28■■□□□ 1.48
RANBP3-211ENST00000587479 UGGT1Q9NYU2 1555 aa24.28■■□□□ 1.48
RANBP3-211ENST00000587479 ARHGAP31Q2M1Z3 1444 aa24.26■■□□□ 1.47
RANBP3-211ENST00000587479 LTBP4Q8N2S1 1624 aa24.24■■□□□ 1.47
RANBP3-211ENST00000587479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.22■■□□□ 1.47
RANBP3-211ENST00000587479 ANKLE2Q86XL3 938 aa24.21■■□□□ 1.47
RANBP3-211ENST00000587479 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.47
RANBP3-211ENST00000587479 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
RANBP3-211ENST00000587479 ANKRD50Q9ULJ7 1429 aa24.2■■□□□ 1.46
RANBP3-211ENST00000587479 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
RANBP3-211ENST00000587479 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
RANBP3-211ENST00000587479 IQSEC2Q5JU85 1478 aa24.19■■□□□ 1.46
RANBP3-211ENST00000587479 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
RANBP3-211ENST00000587479 UBR1Q8IWV7 1749 aa24.17■■□□□ 1.46
RANBP3-211ENST00000587479 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
RANBP3-211ENST00000587479 EFCAB6Q5THR3 1501 aa24.14■■□□□ 1.45
RANBP3-211ENST00000587479 MED14O60244 1454 aa24.13■■□□□ 1.45
RANBP3-211ENST00000587479 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
RANBP3-211ENST00000587479 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
RANBP3-211ENST00000587479 ITGAEP38570 1179 aa24.1■■□□□ 1.45
RANBP3-211ENST00000587479 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
RANBP3-211ENST00000587479 UNC13BO14795 1591 aa24.09■■□□□ 1.45
RANBP3-211ENST00000587479 TET3O43151 1660 aa24.08■■□□□ 1.45
RANBP3-211ENST00000587479 KDM5AP29375 1690 aaKnown RBP24.08■■□□□ 1.44
RANBP3-211ENST00000587479 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
RANBP3-211ENST00000587479 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
RANBP3-211ENST00000587479 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
RANBP3-211ENST00000587479 SLIT1O75093 1534 aa24.05■■□□□ 1.44
RANBP3-211ENST00000587479 SYNMO15061 1565 aa24.05■■□□□ 1.44
RANBP3-211ENST00000587479 CPS1P31327 1500 aa24.05■■□□□ 1.44
RANBP3-211ENST00000587479 NOS1P29475 1434 aa24.04■■□□□ 1.44
RANBP3-211ENST00000587479 SCAF11Q99590 1463 aaKnown RBP24.04■■□□□ 1.44
RANBP3-211ENST00000587479 ARHGAP23Q9P227 1491 aa24.04■■□□□ 1.44
RANBP3-211ENST00000587479 IDI1Q13907 227 aa24.02■■□□□ 1.44
RANBP3-211ENST00000587479 EID1Q9Y6B2 187 aa24.02■■□□□ 1.44
RANBP3-211ENST00000587479 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
RANBP3-211ENST00000587479 TXNDC2Q86VQ3 553 aa24.01■■□□□ 1.43
RANBP3-211ENST00000587479 IQGAP3Q86VI3 1631 aa24■■□□□ 1.43
RANBP3-211ENST00000587479 SLC52A1Q9NWF4 448 aa24■■□□□ 1.43
RANBP3-211ENST00000587479 TMEM2Q9UHN6 1383 aa23.99■■□□□ 1.43
RANBP3-211ENST00000587479 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
RANBP3-211ENST00000587479 UBAP1LF5GYI3 381 aa23.97■■□□□ 1.43
RANBP3-211ENST00000587479 LTKP29376 864 aa23.97■■□□□ 1.43
RANBP3-211ENST00000587479 E9PCH4 1651 aa23.96■■□□□ 1.43
RANBP3-211ENST00000587479 NUP155O75694 1391 aa23.95■■□□□ 1.42
RANBP3-211ENST00000587479 STRCP1A6NGW2 1772 aa23.91■■□□□ 1.42
RANBP3-211ENST00000587479 MYO5BQ9ULV0 1848 aa23.91■■□□□ 1.42
RANBP3-211ENST00000587479 TOM1O60784 492 aa23.87■■□□□ 1.41
RANBP3-211ENST00000587479 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
RANBP3-211ENST00000587479 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
RANBP3-211ENST00000587479 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
RANBP3-211ENST00000587479 NAIPQ13075 1403 aa23.84■■□□□ 1.41
RANBP3-211ENST00000587479 CHGAP10645 457 aaKnown RBP23.83■■□□□ 1.41
RANBP3-211ENST00000587479 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
RANBP3-211ENST00000587479 BCANQ96GW7 911 aa23.81■■□□□ 1.4
RANBP3-211ENST00000587479 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
RANBP3-211ENST00000587479 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms