RNA–Protein interactions for RNA: ENST00000587336.1

SMAD7-205, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-205ENST00000587336 CAMSAP2Q08AD1 1489 aa17.39■□□□□ 0.37
SMAD7-205ENST00000587336 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
SMAD7-205ENST00000587336 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
SMAD7-205ENST00000587336 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
SMAD7-205ENST00000587336 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
SMAD7-205ENST00000587336 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
SMAD7-205ENST00000587336 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
SMAD7-205ENST00000587336 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
SMAD7-205ENST00000587336 KIF3BO15066 747 aa17.35■□□□□ 0.37
SMAD7-205ENST00000587336 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
SMAD7-205ENST00000587336 APLP2Q06481 763 aa17.34■□□□□ 0.37
SMAD7-205ENST00000587336 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
SMAD7-205ENST00000587336 HRCP23327 699 aa17.32■□□□□ 0.36
SMAD7-205ENST00000587336 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
SMAD7-205ENST00000587336 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
SMAD7-205ENST00000587336 CPS1P31327 1500 aa17.31■□□□□ 0.36
SMAD7-205ENST00000587336 FBXO31Q5XUX0 539 aaPredicted RBP17.3■□□□□ 0.36
SMAD7-205ENST00000587336 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
SMAD7-205ENST00000587336 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
SMAD7-205ENST00000587336 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
SMAD7-205ENST00000587336 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
SMAD7-205ENST00000587336 KDM5DQ9BY66 1539 aa17.28■□□□□ 0.36
SMAD7-205ENST00000587336 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
SMAD7-205ENST00000587336 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
SMAD7-205ENST00000587336 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
SMAD7-205ENST00000587336 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
SMAD7-205ENST00000587336 KANK4Q5T7N3 995 aaPredicted RBP17.27■□□□□ 0.36
SMAD7-205ENST00000587336 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
SMAD7-205ENST00000587336 TNRQ92752 1358 aa17.26■□□□□ 0.35
SMAD7-205ENST00000587336 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SMAD7-205ENST00000587336 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
SMAD7-205ENST00000587336 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
SMAD7-205ENST00000587336 PZPP20742 1482 aa17.24■□□□□ 0.35
SMAD7-205ENST00000587336 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
SMAD7-205ENST00000587336 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
SMAD7-205ENST00000587336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMAD7-205ENST00000587336 MAP3K1Q13233 1512 aa17.19■□□□□ 0.34
SMAD7-205ENST00000587336 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
SMAD7-205ENST00000587336 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
SMAD7-205ENST00000587336 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
SMAD7-205ENST00000587336 CEP152O94986 1710 aa17.18■□□□□ 0.34
SMAD7-205ENST00000587336 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
SMAD7-205ENST00000587336 POTEAQ6S8J7 498 aa17.17■□□□□ 0.34
SMAD7-205ENST00000587336 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
SMAD7-205ENST00000587336 ABCC3O15438 1527 aa17.16■□□□□ 0.34
SMAD7-205ENST00000587336 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
SMAD7-205ENST00000587336 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
SMAD7-205ENST00000587336 ZC3H13Q5T200 1668 aaKnown RBP17.15■□□□□ 0.34
SMAD7-205ENST00000587336 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
SMAD7-205ENST00000587336 NLRP1Q9C000 1473 aa17.14■□□□□ 0.33
SMAD7-205ENST00000587336 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
SMAD7-205ENST00000587336 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
SMAD7-205ENST00000587336 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
SMAD7-205ENST00000587336 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
SMAD7-205ENST00000587336 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
SMAD7-205ENST00000587336 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
SMAD7-205ENST00000587336 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
SMAD7-205ENST00000587336 ERVK-7P63135 1459 aa17.11■□□□□ 0.33
SMAD7-205ENST00000587336 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
SMAD7-205ENST00000587336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMAD7-205ENST00000587336 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
SMAD7-205ENST00000587336 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
SMAD7-205ENST00000587336 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
SMAD7-205ENST00000587336 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
SMAD7-205ENST00000587336 ABCC5O15440 1437 aa17.08■□□□□ 0.32
SMAD7-205ENST00000587336 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
SMAD7-205ENST00000587336 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
SMAD7-205ENST00000587336 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
SMAD7-205ENST00000587336 UBR1Q8IWV7 1749 aa17.06■□□□□ 0.32
SMAD7-205ENST00000587336 DAPK1P53355 1430 aa17.05■□□□□ 0.32
SMAD7-205ENST00000587336 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
SMAD7-205ENST00000587336 STRCP1A6NGW2 1772 aa17.04■□□□□ 0.32
SMAD7-205ENST00000587336 MED14O60244 1454 aa17.04■□□□□ 0.32
SMAD7-205ENST00000587336 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
SMAD7-205ENST00000587336 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
SMAD7-205ENST00000587336 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
SMAD7-205ENST00000587336 SYNMO15061 1565 aa17.01■□□□□ 0.31
SMAD7-205ENST00000587336 KANK1Q14678 1352 aa17■□□□□ 0.31
SMAD7-205ENST00000587336 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMAD7-205ENST00000587336 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
SMAD7-205ENST00000587336 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
SMAD7-205ENST00000587336 LTKP29376 864 aa16.98■□□□□ 0.31
SMAD7-205ENST00000587336 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
SMAD7-205ENST00000587336 TXNDC2Q86VQ3 553 aa16.98■□□□□ 0.31
SMAD7-205ENST00000587336 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
SMAD7-205ENST00000587336 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
SMAD7-205ENST00000587336 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
SMAD7-205ENST00000587336 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.31
SMAD7-205ENST00000587336 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
SMAD7-205ENST00000587336 SLIT1O75093 1534 aa16.94■□□□□ 0.3
SMAD7-205ENST00000587336 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
SMAD7-205ENST00000587336 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
SMAD7-205ENST00000587336 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
SMAD7-205ENST00000587336 IDI1Q13907 227 aa16.91■□□□□ 0.3
SMAD7-205ENST00000587336 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
SMAD7-205ENST00000587336 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
SMAD7-205ENST00000587336 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
SMAD7-205ENST00000587336 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
SMAD7-205ENST00000587336 ADGRL2O95490 1459 aa16.88■□□□□ 0.29
SMAD7-205ENST00000587336 TRIM52Q96A61 297 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms