RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
TPM4-206ENST00000587201 CROCC2H7BZ55 1655 aa27.42■■□□□ 1.98
TPM4-206ENST00000587201 DNMT1P26358 1616 aaKnown RBP27.41■■□□□ 1.98
TPM4-206ENST00000587201 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
TPM4-206ENST00000587201 KIF15Q9NS87 1388 aa27.39■■□□□ 1.98
TPM4-206ENST00000587201 EIF2AK4Q9P2K8 1649 aaKnown RBP27.39■■□□□ 1.98
TPM4-206ENST00000587201 RRP7BPQ9NSQ0 103 aa27.39■■□□□ 1.98
TPM4-206ENST00000587201 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
TPM4-206ENST00000587201 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
TPM4-206ENST00000587201 STRCQ7RTU9 1775 aa27.37■■□□□ 1.97
TPM4-206ENST00000587201 CHIC2Q9UKJ5 165 aa27.37■■□□□ 1.97
TPM4-206ENST00000587201 RNF17Q9BXT8 1623 aaKnown RBP27.37■■□□□ 1.97
TPM4-206ENST00000587201 MYO3AQ8NEV4 1616 aa27.36■■□□□ 1.97
TPM4-206ENST00000587201 FBXO31Q5XUX0 539 aaPredicted RBP27.35■■□□□ 1.97
TPM4-206ENST00000587201 PZPP20742 1482 aa27.34■■□□□ 1.97
TPM4-206ENST00000587201 ANKRD30AQ9BXX3 1397 aa27.33■■□□□ 1.97
TPM4-206ENST00000587201 CAMSAP1Q5T5Y3 1602 aa27.32■■□□□ 1.96
TPM4-206ENST00000587201 NCOA1Q15788 1441 aa27.32■■□□□ 1.96
TPM4-206ENST00000587201 ERBINQ96RT1 1412 aa27.32■■□□□ 1.96
TPM4-206ENST00000587201 CEP170BQ9Y4F5 1589 aaPredicted RBP27.31■■□□□ 1.96
TPM4-206ENST00000587201 ZNF142P52746 1687 aaPredicted RBP27.31■■□□□ 1.96
TPM4-206ENST00000587201 TNRQ92752 1358 aa27.31■■□□□ 1.96
TPM4-206ENST00000587201 ABCC3O15438 1527 aa27.3■■□□□ 1.96
TPM4-206ENST00000587201 MROH1Q8NDA8 1641 aa27.29■■□□□ 1.96
TPM4-206ENST00000587201 ZC3H13Q5T200 1668 aaKnown RBP27.28■■□□□ 1.96
TPM4-206ENST00000587201 PPARGC1BQ86YN6 1023 aaKnown RBP27.28■■□□□ 1.96
TPM4-206ENST00000587201 PTPRTO14522 1441 aa27.27■■□□□ 1.96
TPM4-206ENST00000587201 A2ML1A8K2U0 1454 aa27.26■■□□□ 1.95
TPM4-206ENST00000587201 FBXO41Q8TF61 875 aa27.25■■□□□ 1.95
TPM4-206ENST00000587201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.24■■□□□ 1.953e-6■■□□□ 13.8
TPM4-206ENST00000587201 NCKAP5LQ9HCH0 1330 aa27.23■■□□□ 1.95
TPM4-206ENST00000587201 CEP152O94986 1710 aa27.22■■□□□ 1.95
TPM4-206ENST00000587201 ADGRL2O95490 1459 aa27.22■■□□□ 1.95
TPM4-206ENST00000587201 PLA2R1Q13018 1463 aa27.22■■□□□ 1.95
TPM4-206ENST00000587201 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
TPM4-206ENST00000587201 CERKQ8TCT0 537 aa27.21■■□□□ 1.95
TPM4-206ENST00000587201 PKD2Q13563 968 aa27.2■■□□□ 1.94
TPM4-206ENST00000587201 KANK1Q14678 1352 aa27.19■■□□□ 1.94
TPM4-206ENST00000587201 NLRP1Q9C000 1473 aa27.17■■□□□ 1.94
TPM4-206ENST00000587201 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
TPM4-206ENST00000587201 ERVK-7P63135 1459 aa27.16■■□□□ 1.94
TPM4-206ENST00000587201 SPATA31D1Q6ZQQ2 1576 aa27.16■■□□□ 1.94
TPM4-206ENST00000587201 THEMISQ8N1K5 641 aaPredicted RBP27.12■■□□□ 1.93
TPM4-206ENST00000587201 ARHGAP31Q2M1Z3 1444 aa27.12■■□□□ 1.93
TPM4-206ENST00000587201 ANKRD50Q9ULJ7 1429 aa27.12■■□□□ 1.93
TPM4-206ENST00000587201 UGGT1Q9NYU2 1555 aa27.12■■□□□ 1.93
TPM4-206ENST00000587201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.1■■□□□ 1.938e-48■■■■□ 23.3
TPM4-206ENST00000587201 ITGAEP38570 1179 aa27.1■■□□□ 1.93
TPM4-206ENST00000587201 CFAP65Q6ZU64 1925 aaKnown RBP27.09■■□□□ 1.93
TPM4-206ENST00000587201 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
TPM4-206ENST00000587201 VWDEQ8N2E2 1590 aa27.06■■□□□ 1.92
TPM4-206ENST00000587201 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
TPM4-206ENST00000587201 ROCK1Q13464 1354 aa27.05■■□□□ 1.92
TPM4-206ENST00000587201 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
TPM4-206ENST00000587201 POLR1AO95602 1720 aaPredicted RBP27.02■■□□□ 1.92
TPM4-206ENST00000587201 ZNF335Q9H4Z2 1342 aaPredicted RBP27.02■■□□□ 1.92
TPM4-206ENST00000587201 NEURL4Q96JN8 1562 aa27■■□□□ 1.91
TPM4-206ENST00000587201 EFCAB6Q5THR3 1501 aa26.97■■□□□ 1.91
TPM4-206ENST00000587201 RRBP1Q9P2E9 1410 aaKnown RBP26.96■■□□□ 1.91
TPM4-206ENST00000587201 UBR1Q8IWV7 1749 aa26.96■■□□□ 1.91
TPM4-206ENST00000587201 NPHP4O75161 1426 aaPredicted RBP26.94■■□□□ 1.9
TPM4-206ENST00000587201 STAG3Q9UJ98 1225 aa26.94■■□□□ 1.9
TPM4-206ENST00000587201 MED14O60244 1454 aa26.93■■□□□ 1.9
TPM4-206ENST00000587201 UNC13BO14795 1591 aa26.92■■□□□ 1.9
TPM4-206ENST00000587201 NOS1P29475 1434 aa26.91■■□□□ 1.9
TPM4-206ENST00000587201 IDI1Q13907 227 aa26.91■■□□□ 1.9
TPM4-206ENST00000587201 PIK3C2BO00750 1634 aa26.9■■□□□ 1.9
TPM4-206ENST00000587201 IQSEC2Q5JU85 1478 aa26.9■■□□□ 1.9
TPM4-206ENST00000587201 SYNMO15061 1565 aa26.89■■□□□ 1.9
TPM4-206ENST00000587201 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
TPM4-206ENST00000587201 TET3O43151 1660 aa26.89■■□□□ 1.89
TPM4-206ENST00000587201 TXNDC2Q86VQ3 553 aa26.87■■□□□ 1.89
TPM4-206ENST00000587201 IQGAP1P46940 1657 aa26.86■■□□□ 1.89
TPM4-206ENST00000587201 SCAF11Q99590 1463 aaKnown RBP26.86■■□□□ 1.89
TPM4-206ENST00000587201 ARHGAP23Q9P227 1491 aa26.86■■□□□ 1.89
TPM4-206ENST00000587201 SLIT1O75093 1534 aa26.85■■□□□ 1.89
TPM4-206ENST00000587201 NUP155O75694 1391 aa26.85■■□□□ 1.89
TPM4-206ENST00000587201 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
TPM4-206ENST00000587201 EID1Q9Y6B2 187 aa26.85■■□□□ 1.89
TPM4-206ENST00000587201 LTKP29376 864 aa26.84■■□□□ 1.89
TPM4-206ENST00000587201 GCC2Q8IWJ2 1684 aa26.84■■□□□ 1.89
TPM4-206ENST00000587201 TMEM2Q9UHN6 1383 aa26.83■■□□□ 1.88
TPM4-206ENST00000587201 IQGAP3Q86VI3 1631 aa26.82■■□□□ 1.88
TPM4-206ENST00000587201 KDM5AP29375 1690 aaKnown RBP26.8■■□□□ 1.88
TPM4-206ENST00000587201 CPS1P31327 1500 aa26.8■■□□□ 1.88
TPM4-206ENST00000587201 ADGRB3O60242 1522 aa26.79■■□□□ 1.88
TPM4-206ENST00000587201 E9PCH4 1651 aa26.77■■□□□ 1.88
TPM4-206ENST00000587201 UBAP1LF5GYI3 381 aa26.75■■□□□ 1.87
TPM4-206ENST00000587201 NAIPQ13075 1403 aa26.74■■□□□ 1.87
TPM4-206ENST00000587201 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
TPM4-206ENST00000587201 HFM1A2PYH4 1435 aa26.67■■□□□ 1.86
TPM4-206ENST00000587201 TMEM131LA2VDJ0 1609 aa26.66■■□□□ 1.86
TPM4-206ENST00000587201 STRCP1A6NGW2 1772 aa26.66■■□□□ 1.86
TPM4-206ENST00000587201 HDGFP51858 240 aaKnown RBP26.65■■□□□ 1.86
TPM4-206ENST00000587201 BCANQ96GW7 911 aa26.65■■□□□ 1.86
TPM4-206ENST00000587201 TRIM52Q96A61 297 aa26.64■■□□□ 1.86
TPM4-206ENST00000587201 MYO5BQ9ULV0 1848 aa26.64■■□□□ 1.85
TPM4-206ENST00000587201 RIMS2Q9UQ26 1411 aa26.64■■□□□ 1.85
TPM4-206ENST00000587201 TOM1O60784 492 aa26.63■■□□□ 1.85
TPM4-206ENST00000587201 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms