RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 PTPRKQ15262 1439 aa29.96■■■□□ 2.39
SPHK1-204ENST00000587167 MAST1Q9Y2H9 1570 aa29.94■■■□□ 2.38
SPHK1-204ENST00000587167 DAPK1P53355 1430 aa29.94■■■□□ 2.38
SPHK1-204ENST00000587167 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
SPHK1-204ENST00000587167 TSPY4P0CV99 314 aa29.93■■■□□ 2.38
SPHK1-204ENST00000587167 TSPY10P0CW01 314 aa29.93■■■□□ 2.38
SPHK1-204ENST00000587167 ABCC5O15440 1437 aa29.93■■■□□ 2.38
SPHK1-204ENST00000587167 ZNF142P52746 1687 aaPredicted RBP29.92■■■□□ 2.38
SPHK1-204ENST00000587167 CAMSAP1Q5T5Y3 1602 aa29.92■■■□□ 2.38
SPHK1-204ENST00000587167 MYO3AQ8NEV4 1616 aa29.92■■■□□ 2.38
SPHK1-204ENST00000587167 SHANK2Q9UPX8 1470 aa29.88■■■□□ 2.37
SPHK1-204ENST00000587167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.88■■■□□ 2.37
SPHK1-204ENST00000587167 CEP170BQ9Y4F5 1589 aaPredicted RBP29.86■■■□□ 2.37
SPHK1-204ENST00000587167 LTBP4Q8N2S1 1624 aa29.85■■■□□ 2.37
SPHK1-204ENST00000587167 FAM135AQ9P2D6 1515 aa29.82■■■□□ 2.36
SPHK1-204ENST00000587167 KIF3BO15066 747 aa29.82■■■□□ 2.36
SPHK1-204ENST00000587167 PLA2R1Q13018 1463 aa29.81■■■□□ 2.36
SPHK1-204ENST00000587167 CHIC2Q9UKJ5 165 aa29.79■■■□□ 2.36
SPHK1-204ENST00000587167 KDM5DQ9BY66 1539 aa29.78■■■□□ 2.36
SPHK1-204ENST00000587167 ITGAEP38570 1179 aa29.78■■■□□ 2.36
SPHK1-204ENST00000587167 NCKAP5LQ9HCH0 1330 aa29.77■■■□□ 2.36
SPHK1-204ENST00000587167 A2ML1A8K2U0 1454 aa29.75■■■□□ 2.35
SPHK1-204ENST00000587167 PZPP20742 1482 aa29.74■■■□□ 2.35
SPHK1-204ENST00000587167 ADGRL2O95490 1459 aa29.74■■■□□ 2.35
SPHK1-204ENST00000587167 PKD2Q13563 968 aa29.73■■■□□ 2.35
SPHK1-204ENST00000587167 IQSEC2Q5JU85 1478 aa29.72■■■□□ 2.35
SPHK1-204ENST00000587167 FBXO31Q5XUX0 539 aaPredicted RBP29.71■■■□□ 2.35
SPHK1-204ENST00000587167 ANKRD30AQ9BXX3 1397 aa29.71■■■□□ 2.35
SPHK1-204ENST00000587167 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
SPHK1-204ENST00000587167 DUOX2Q9NRD8 1548 aa29.7■■■□□ 2.34
SPHK1-204ENST00000587167 WASHC2CQ9Y4E1 1318 aa29.7■■■□□ 2.34
SPHK1-204ENST00000587167 RRP7BPQ9NSQ0 103 aa29.69■■■□□ 2.34
SPHK1-204ENST00000587167 TNRQ92752 1358 aa29.68■■■□□ 2.34
SPHK1-204ENST00000587167 KIF15Q9NS87 1388 aa29.68■■■□□ 2.34
SPHK1-204ENST00000587167 EIF2AK4Q9P2K8 1649 aaKnown RBP29.66■■■□□ 2.34
SPHK1-204ENST00000587167 ZNF335Q9H4Z2 1342 aaPredicted RBP29.63■■■□□ 2.33
SPHK1-204ENST00000587167 ROCK1Q13464 1354 aa29.63■■■□□ 2.33
SPHK1-204ENST00000587167 ZC3H13Q5T200 1668 aaKnown RBP29.62■■■□□ 2.33
SPHK1-204ENST00000587167 POLR1AO95602 1720 aaPredicted RBP29.62■■■□□ 2.33
SPHK1-204ENST00000587167 MROH1Q8NDA8 1641 aa29.61■■■□□ 2.33
SPHK1-204ENST00000587167 ABCC3O15438 1527 aa29.61■■■□□ 2.33
SPHK1-204ENST00000587167 NEURL4Q96JN8 1562 aa29.58■■■□□ 2.33
SPHK1-204ENST00000587167 ERBINQ96RT1 1412 aa29.58■■■□□ 2.33
SPHK1-204ENST00000587167 NLRP1Q9C000 1473 aa29.58■■■□□ 2.33
SPHK1-204ENST00000587167 GCC2Q8IWJ2 1684 aa29.56■■■□□ 2.32
SPHK1-204ENST00000587167 SPATA31D1Q6ZQQ2 1576 aa29.55■■■□□ 2.32
SPHK1-204ENST00000587167 CEP152O94986 1710 aa29.52■■■□□ 2.32
SPHK1-204ENST00000587167 ANKRD50Q9ULJ7 1429 aa29.52■■■□□ 2.32
SPHK1-204ENST00000587167 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
SPHK1-204ENST00000587167 DEPDC5O75140 1603 aa29.49■■■□□ 2.31
SPHK1-204ENST00000587167 THEMISQ8N1K5 641 aaPredicted RBP29.49■■■□□ 2.31
SPHK1-204ENST00000587167 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
SPHK1-204ENST00000587167 ANKLE2Q86XL3 938 aa29.46■■■□□ 2.31
SPHK1-204ENST00000587167 MED14O60244 1454 aa29.46■■■□□ 2.31
SPHK1-204ENST00000587167 NAIPQ13075 1403 aa29.45■■■□□ 2.31
SPHK1-204ENST00000587167 PRDM15P57071 1507 aaPredicted RBP29.45■■■□□ 2.31
SPHK1-204ENST00000587167 CFAP65Q6ZU64 1925 aaKnown RBP29.45■■■□□ 2.31
SPHK1-204ENST00000587167 HFM1A2PYH4 1435 aa29.43■■■□□ 2.3
SPHK1-204ENST00000587167 CPS1P31327 1500 aa29.4■■■□□ 2.3
SPHK1-204ENST00000587167 UNC13BO14795 1591 aa29.4■■■□□ 2.3
SPHK1-204ENST00000587167 VWDEQ8N2E2 1590 aa29.4■■■□□ 2.3
SPHK1-204ENST00000587167 ARHGAP31Q2M1Z3 1444 aa29.4■■■□□ 2.3
SPHK1-204ENST00000587167 NPHP4O75161 1426 aaPredicted RBP29.39■■■□□ 2.3
SPHK1-204ENST00000587167 UBAP1LF5GYI3 381 aa29.39■■■□□ 2.3
SPHK1-204ENST00000587167 UBR1Q8IWV7 1749 aa29.38■■■□□ 2.29
SPHK1-204ENST00000587167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.38■■■□□ 2.291e-7■■■■□ 23.9
SPHK1-204ENST00000587167 IQGAP1P46940 1657 aa29.37■■■□□ 2.29
SPHK1-204ENST00000587167 KANK1Q14678 1352 aa29.34■■■□□ 2.29
SPHK1-204ENST00000587167 DISP3Q9P2K9 1392 aa29.33■■■□□ 2.29
SPHK1-204ENST00000587167 TRIM26Q12899 539 aaPredicted RBP29.29■■■□□ 2.28
SPHK1-204ENST00000587167 IQGAP3Q86VI3 1631 aa29.29■■■□□ 2.28
SPHK1-204ENST00000587167 LMTK2Q8IWU2 1503 aa29.29■■■□□ 2.28
SPHK1-204ENST00000587167 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
SPHK1-204ENST00000587167 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
SPHK1-204ENST00000587167 SETD5Q9C0A6 1442 aa29.28■■■□□ 2.28
SPHK1-204ENST00000587167 SLIT1O75093 1534 aa29.26■■■□□ 2.27
SPHK1-204ENST00000587167 TET3O43151 1660 aa29.25■■■□□ 2.27
SPHK1-204ENST00000587167 PIK3C2BO00750 1634 aa29.23■■■□□ 2.27
SPHK1-204ENST00000587167 SCAF11Q99590 1463 aaKnown RBP29.23■■■□□ 2.27
SPHK1-204ENST00000587167 NUP155O75694 1391 aa29.23■■■□□ 2.27
SPHK1-204ENST00000587167 ILDR2Q71H61 639 aa29.22■■■□□ 2.27
SPHK1-204ENST00000587167 TOM1O60784 492 aa29.2■■■□□ 2.26
SPHK1-204ENST00000587167 LTKP29376 864 aa29.2■■■□□ 2.26
SPHK1-204ENST00000587167 KDM5AP29375 1690 aaKnown RBP29.2■■■□□ 2.26
SPHK1-204ENST00000587167 ALKQ9UM73 1620 aa29.2■■■□□ 2.26
SPHK1-204ENST00000587167 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.26
SPHK1-204ENST00000587167 RAB3GAP2Q9H2M9 1393 aa29.18■■■□□ 2.26
SPHK1-204ENST00000587167 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
SPHK1-204ENST00000587167 LRRC7Q96NW7 1537 aa29.17■■■□□ 2.26
SPHK1-204ENST00000587167 E9PCH4 1651 aa29.17■■■□□ 2.26
SPHK1-204ENST00000587167 SYNMO15061 1565 aa29.17■■■□□ 2.26
SPHK1-204ENST00000587167 TXNDC2Q86VQ3 553 aa29.16■■■□□ 2.26
SPHK1-204ENST00000587167 NOS1P29475 1434 aa29.15■■■□□ 2.26
SPHK1-204ENST00000587167 TMEM2Q9UHN6 1383 aa29.13■■■□□ 2.25
SPHK1-204ENST00000587167 PIP4K2BP78356 416 aa29.13■■■□□ 2.25
SPHK1-204ENST00000587167 IDI1Q13907 227 aa29.13■■■□□ 2.25
SPHK1-204ENST00000587167 HSPA1LP34931 641 aa29.11■■■□□ 2.25
SPHK1-204ENST00000587167 EID1Q9Y6B2 187 aa29.1■■■□□ 2.25
SPHK1-204ENST00000587167 SCAF1Q9H7N4 1312 aaKnown RBP29.09■■■□□ 2.25
SPHK1-204ENST00000587167 ACIN1Q9UKV3 1341 aaKnown RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms