RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 SOCS7O14512 581 aa26.21■■□□□ 1.79
NPC1-205ENST00000587163 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
NPC1-205ENST00000587163 CCDC141Q6ZP82 1450 aa26.2■■□□□ 1.78
NPC1-205ENST00000587163 CAMSAP2Q08AD1 1489 aa26.19■■□□□ 1.78
NPC1-205ENST00000587163 TNRQ92752 1358 aa26.17■■□□□ 1.78
NPC1-205ENST00000587163 RSPH4AQ5TD94 716 aa26.16■■□□□ 1.78
NPC1-205ENST00000587163 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.78
NPC1-205ENST00000587163 PZPP20742 1482 aa26.14■■□□□ 1.78
NPC1-205ENST00000587163 KDM5DQ9BY66 1539 aa26.14■■□□□ 1.77
NPC1-205ENST00000587163 NEURL4Q96JN8 1562 aa26.11■■□□□ 1.77
NPC1-205ENST00000587163 POLR1AO95602 1720 aaPredicted RBP26.09■■□□□ 1.77
NPC1-205ENST00000587163 FAM135AQ9P2D6 1515 aa26.09■■□□□ 1.77
NPC1-205ENST00000587163 ARHGEF5Q12774 1597 aa26.08■■□□□ 1.77
NPC1-205ENST00000587163 TSPY4P0CV99 314 aa26.08■■□□□ 1.77
NPC1-205ENST00000587163 TSPY10P0CW01 314 aa26.08■■□□□ 1.77
NPC1-205ENST00000587163 MIA2Q96PC5 1412 aa26.07■■□□□ 1.76
NPC1-205ENST00000587163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.07■■□□□ 1.76
NPC1-205ENST00000587163 ANKLE2Q86XL3 938 aa26.04■■□□□ 1.76
NPC1-205ENST00000587163 THEMISQ8N1K5 641 aaPredicted RBP26.04■■□□□ 1.76
NPC1-205ENST00000587163 SHANK2Q9UPX8 1470 aa26.04■■□□□ 1.76
NPC1-205ENST00000587163 LRRC9Q6ZRR7 1453 aa26.02■■□□□ 1.76
NPC1-205ENST00000587163 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
NPC1-205ENST00000587163 UGGT1Q9NYU2 1555 aa26■■□□□ 1.75
NPC1-205ENST00000587163 CPS1P31327 1500 aa26■■□□□ 1.75
NPC1-205ENST00000587163 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
NPC1-205ENST00000587163 PIP4K2BP78356 416 aa25.99■■□□□ 1.75
NPC1-205ENST00000587163 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
NPC1-205ENST00000587163 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
NPC1-205ENST00000587163 HSPA1LP34931 641 aa25.98■■□□□ 1.75
NPC1-205ENST00000587163 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
NPC1-205ENST00000587163 VWDEQ8N2E2 1590 aa25.98■■□□□ 1.75
NPC1-205ENST00000587163 RNF17Q9BXT8 1623 aaKnown RBP25.97■■□□□ 1.75
NPC1-205ENST00000587163 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
NPC1-205ENST00000587163 MAST1Q9Y2H9 1570 aa25.96■■□□□ 1.75
NPC1-205ENST00000587163 TOM1O60784 492 aa25.96■■□□□ 1.75
NPC1-205ENST00000587163 ABCC3O15438 1527 aa25.96■■□□□ 1.75
NPC1-205ENST00000587163 MED14O60244 1454 aa25.96■■□□□ 1.75
NPC1-205ENST00000587163 DEPDC5O75140 1603 aa25.95■■□□□ 1.74
NPC1-205ENST00000587163 MROH1Q8NDA8 1641 aa25.91■■□□□ 1.74
NPC1-205ENST00000587163 ERVK-7P63135 1459 aa25.9■■□□□ 1.74
NPC1-205ENST00000587163 ZC3H13Q5T200 1668 aaKnown RBP25.9■■□□□ 1.74
NPC1-205ENST00000587163 EIF2AK4Q9P2K8 1649 aaKnown RBP25.89■■□□□ 1.74
NPC1-205ENST00000587163 MYOM3Q5VTT5 1437 aa25.88■■□□□ 1.73
NPC1-205ENST00000587163 ALKQ9UM73 1620 aa25.88■■□□□ 1.73
NPC1-205ENST00000587163 IQGAP1P46940 1657 aa25.88■■□□□ 1.73
NPC1-205ENST00000587163 MAP3K1Q13233 1512 aa25.87■■□□□ 1.73
NPC1-205ENST00000587163 CFAP65Q6ZU64 1925 aaKnown RBP25.86■■□□□ 1.73
NPC1-205ENST00000587163 CEP152O94986 1710 aa25.85■■□□□ 1.73
NPC1-205ENST00000587163 STRCP1A6NGW2 1772 aa25.85■■□□□ 1.73
NPC1-205ENST00000587163 MED1Q15648 1581 aaPredicted RBP25.84■■□□□ 1.73
NPC1-205ENST00000587163 DUOX2Q9NRD8 1548 aa25.82■■□□□ 1.72
NPC1-205ENST00000587163 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
NPC1-205ENST00000587163 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
NPC1-205ENST00000587163 LTKP29376 864 aa25.78■■□□□ 1.72
NPC1-205ENST00000587163 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
NPC1-205ENST00000587163 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
NPC1-205ENST00000587163 ABCC5O15440 1437 aa25.77■■□□□ 1.72
NPC1-205ENST00000587163 SCAF11Q99590 1463 aaKnown RBP25.75■■□□□ 1.71
NPC1-205ENST00000587163 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
NPC1-205ENST00000587163 TXNDC2Q86VQ3 553 aa25.74■■□□□ 1.71
NPC1-205ENST00000587163 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
NPC1-205ENST00000587163 PRDM15P57071 1507 aaPredicted RBP25.73■■□□□ 1.71
NPC1-205ENST00000587163 ARHGAP23Q9P227 1491 aa25.73■■□□□ 1.71
NPC1-205ENST00000587163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.711e-6■□□□□ 8.7
NPC1-205ENST00000587163 CROCC2H7BZ55 1655 aa25.72■■□□□ 1.71
NPC1-205ENST00000587163 SYNMO15061 1565 aa25.72■■□□□ 1.71
NPC1-205ENST00000587163 SLIT1O75093 1534 aa25.72■■□□□ 1.71
NPC1-205ENST00000587163 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
NPC1-205ENST00000587163 PTPN23Q9H3S7 1636 aa25.71■■□□□ 1.71
NPC1-205ENST00000587163 DAPK1P53355 1430 aa25.68■■□□□ 1.7
NPC1-205ENST00000587163 PIK3C2BO00750 1634 aa25.66■■□□□ 1.7
NPC1-205ENST00000587163 EID1Q9Y6B2 187 aa25.66■■□□□ 1.7
NPC1-205ENST00000587163 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
NPC1-205ENST00000587163 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
NPC1-205ENST00000587163 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
NPC1-205ENST00000587163 APLP2Q06481 763 aa25.63■■□□□ 1.69
NPC1-205ENST00000587163 TMEM2Q9UHN6 1383 aa25.63■■□□□ 1.69
NPC1-205ENST00000587163 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
NPC1-205ENST00000587163 KANK1Q14678 1352 aa25.62■■□□□ 1.69
NPC1-205ENST00000587163 IDI1Q13907 227 aa25.62■■□□□ 1.69
NPC1-205ENST00000587163 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
NPC1-205ENST00000587163 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
NPC1-205ENST00000587163 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.68
NPC1-205ENST00000587163 EFCAB6Q5THR3 1501 aa25.56■■□□□ 1.68
NPC1-205ENST00000587163 KDM5AP29375 1690 aaKnown RBP25.55■■□□□ 1.68
NPC1-205ENST00000587163 SLC26A8Q96RN1 970 aa25.54■■□□□ 1.68
NPC1-205ENST00000587163 TET3O43151 1660 aa25.52■■□□□ 1.68
NPC1-205ENST00000587163 KCNA6P17658 529 aa25.52■■□□□ 1.68
NPC1-205ENST00000587163 TMEM94Q12767 1356 aa25.52■■□□□ 1.68
NPC1-205ENST00000587163 NOS1P29475 1434 aa25.52■■□□□ 1.68
NPC1-205ENST00000587163 RBM33Q96EV2 1170 aaKnown RBP25.51■■□□□ 1.67
NPC1-205ENST00000587163 RGS17Q9UGC6 210 aaPredicted RBP25.51■■□□□ 1.67
NPC1-205ENST00000587163 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
NPC1-205ENST00000587163 PROSER2Q86WR7 435 aaPredicted RBP25.48■■□□□ 1.67
NPC1-205ENST00000587163 ADGRL2O95490 1459 aa25.47■■□□□ 1.67
NPC1-205ENST00000587163 ADGRB3O60242 1522 aa25.46■■□□□ 1.67
NPC1-205ENST00000587163 SLC52A1Q9NWF4 448 aa25.45■■□□□ 1.66
NPC1-205ENST00000587163 FAM50AQ14320 339 aaKnown RBP25.43■■□□□ 1.66
NPC1-205ENST00000587163 BCANQ96GW7 911 aa25.41■■□□□ 1.66
NPC1-205ENST00000587163 ANKRD50Q9ULJ7 1429 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms