RNA–Protein interactions for RNA: ENST00000586958.1

SPRED3-203, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 2

Gene SPRED3, Length 478 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-203ENST00000586958 CLIP1P30622 1438 aa21.33■■□□□ 1.01
SPRED3-203ENST00000586958 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
SPRED3-203ENST00000586958 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
SPRED3-203ENST00000586958 RXRBP28702 533 aa21.31■■□□□ 1
SPRED3-203ENST00000586958 JCADQ9P266 1359 aa21.3■■□□□ 1
SPRED3-203ENST00000586958 PREX2Q70Z35 1606 aa21.29■■□□□ 1
SPRED3-203ENST00000586958 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
SPRED3-203ENST00000586958 MIA2Q96PC5 1412 aa21.27■■□□□ 1
SPRED3-203ENST00000586958 XIRP1Q702N8 1843 aaKnown RBP21.27■□□□□ 0.99
SPRED3-203ENST00000586958 LRP6O75581 1613 aa21.26■□□□□ 0.99
SPRED3-203ENST00000586958 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
SPRED3-203ENST00000586958 HNRNPMP52272 730 aaKnown RBP eCLIP21.26■□□□□ 0.99
SPRED3-203ENST00000586958 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
SPRED3-203ENST00000586958 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
SPRED3-203ENST00000586958 PZPP20742 1482 aa21.26■□□□□ 0.99
SPRED3-203ENST00000586958 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
SPRED3-203ENST00000586958 MEX3CQ5U5Q3 659 aaKnown RBP21.25■□□□□ 0.99
SPRED3-203ENST00000586958 ZRANB1Q9UGI0 708 aa21.24■□□□□ 0.99
SPRED3-203ENST00000586958 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
SPRED3-203ENST00000586958 SETBP1Q9Y6X0 1596 aa21.23■□□□□ 0.99
SPRED3-203ENST00000586958 SYCP2Q9BX26 1530 aa21.22■□□□□ 0.99
SPRED3-203ENST00000586958 ZC3H13Q5T200 1668 aaKnown RBP21.21■□□□□ 0.99
SPRED3-203ENST00000586958 KDM5DQ9BY66 1539 aa21.2■□□□□ 0.98
SPRED3-203ENST00000586958 TMEM94Q12767 1356 aa21.2■□□□□ 0.98
SPRED3-203ENST00000586958 INO80Q9ULG1 1556 aaPredicted RBP21.19■□□□□ 0.98
SPRED3-203ENST00000586958 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
SPRED3-203ENST00000586958 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
SPRED3-203ENST00000586958 PHLPP1O60346 1717 aa21.15■□□□□ 0.98
SPRED3-203ENST00000586958 RBM33Q96EV2 1170 aaKnown RBP21.15■□□□□ 0.98
SPRED3-203ENST00000586958 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
SPRED3-203ENST00000586958 FOXD1Q16676 465 aa21.13■□□□□ 0.97
SPRED3-203ENST00000586958 NUTM2BA6NNL0 878 aaPredicted RBP21.12■□□□□ 0.97
SPRED3-203ENST00000586958 NUTM2EB1AL46 878 aaPredicted RBP21.12■□□□□ 0.97
SPRED3-203ENST00000586958 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
SPRED3-203ENST00000586958 NUTM2AQ8IVF1 878 aaPredicted RBP21.12■□□□□ 0.97
SPRED3-203ENST00000586958 RGS12O14924 1447 aa21.12■□□□□ 0.97
SPRED3-203ENST00000586958 WASHC2CQ9Y4E1 1318 aa21.11■□□□□ 0.97
SPRED3-203ENST00000586958 LTKP29376 864 aa21.11■□□□□ 0.97
SPRED3-203ENST00000586958 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
SPRED3-203ENST00000586958 CDC42BPAQ5VT25 1732 aa21.1■□□□□ 0.97
SPRED3-203ENST00000586958 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
SPRED3-203ENST00000586958 KIF3BO15066 747 aa21.09■□□□□ 0.97
SPRED3-203ENST00000586958 SLAIN2Q9P270 581 aa21.09■□□□□ 0.97
SPRED3-203ENST00000586958 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.97
SPRED3-203ENST00000586958 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
SPRED3-203ENST00000586958 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
SPRED3-203ENST00000586958 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
SPRED3-203ENST00000586958 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
SPRED3-203ENST00000586958 ADGBQ8N7X0 1667 aa21.07■□□□□ 0.96
SPRED3-203ENST00000586958 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
SPRED3-203ENST00000586958 AFF2P51816 1311 aa21.04■□□□□ 0.96
SPRED3-203ENST00000586958 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
SPRED3-203ENST00000586958 KCNA6P17658 529 aa21.02■□□□□ 0.96
SPRED3-203ENST00000586958 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
SPRED3-203ENST00000586958 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
SPRED3-203ENST00000586958 RBM6P78332 1123 aaKnown RBP21.01■□□□□ 0.95
SPRED3-203ENST00000586958 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
SPRED3-203ENST00000586958 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
SPRED3-203ENST00000586958 MSH6P52701 1360 aa20.99■□□□□ 0.95
SPRED3-203ENST00000586958 QTRT2Q9H974 415 aaKnown RBP20.98■□□□□ 0.95
SPRED3-203ENST00000586958 ARHGAP23Q9P227 1491 aa20.98■□□□□ 0.95
SPRED3-203ENST00000586958 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
SPRED3-203ENST00000586958 CFDP1Q9UEE9 299 aaPredicted RBP20.97■□□□□ 0.95
SPRED3-203ENST00000586958 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
SPRED3-203ENST00000586958 PRDM15P57071 1507 aaPredicted RBP20.96■□□□□ 0.95
SPRED3-203ENST00000586958 SLIT1O75093 1534 aa20.94■□□□□ 0.94
SPRED3-203ENST00000586958 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
SPRED3-203ENST00000586958 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
SPRED3-203ENST00000586958 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
SPRED3-203ENST00000586958 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
SPRED3-203ENST00000586958 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
SPRED3-203ENST00000586958 IFFO2Q5TF58 517 aa20.92■□□□□ 0.94
SPRED3-203ENST00000586958 RTEL1-TNFRSF6BF6WH68 1400 aa20.92■□□□□ 0.94
SPRED3-203ENST00000586958 SLC26A8Q96RN1 970 aa20.9■□□□□ 0.94
SPRED3-203ENST00000586958 ZNF644Q9H582 1327 aaPredicted RBP20.89■□□□□ 0.93
SPRED3-203ENST00000586958 C8orf37Q96NL8 207 aa20.88■□□□□ 0.93
SPRED3-203ENST00000586958 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
SPRED3-203ENST00000586958 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
SPRED3-203ENST00000586958 MBD5Q9P267 1494 aa20.87■□□□□ 0.93
SPRED3-203ENST00000586958 AHDC1Q5TGY3 1603 aaPredicted RBP20.86■□□□□ 0.93
SPRED3-203ENST00000586958 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
SPRED3-203ENST00000586958 ABCC3O15438 1527 aa20.85■□□□□ 0.93
SPRED3-203ENST00000586958 CCDC125Q86Z20 511 aa20.85■□□□□ 0.93
SPRED3-203ENST00000586958 LRP5O75197 1615 aa20.84■□□□□ 0.93
SPRED3-203ENST00000586958 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
SPRED3-203ENST00000586958 DIP2AQ14689 1571 aa20.82■□□□□ 0.92
SPRED3-203ENST00000586958 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
SPRED3-203ENST00000586958 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
SPRED3-203ENST00000586958 EEA1Q15075 1411 aa20.8■□□□□ 0.92
SPRED3-203ENST00000586958 TET3O43151 1660 aa20.79■□□□□ 0.92
SPRED3-203ENST00000586958 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
SPRED3-203ENST00000586958 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
SPRED3-203ENST00000586958 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
SPRED3-203ENST00000586958 YY1P25490 414 aa20.77■□□□□ 0.92
SPRED3-203ENST00000586958 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
SPRED3-203ENST00000586958 EP400Q96L91 3159 aa20.75■□□□□ 0.91
SPRED3-203ENST00000586958 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
SPRED3-203ENST00000586958 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
SPRED3-203ENST00000586958 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
SPRED3-203ENST00000586958 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms