RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 PZPP20742 1482 aa12.5□□□□□ -0.41
NPC1-204ENST00000586718 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
NPC1-204ENST00000586718 REREQ9P2R6 1566 aa12.5□□□□□ -0.41
NPC1-204ENST00000586718 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
NPC1-204ENST00000586718 DHX29Q7Z478 1369 aaKnown RBP12.49□□□□□ -0.41
NPC1-204ENST00000586718 NUP155O75694 1391 aa12.48□□□□□ -0.41
NPC1-204ENST00000586718 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
NPC1-204ENST00000586718 KANK1Q14678 1352 aa12.47□□□□□ -0.41
NPC1-204ENST00000586718 TET3O43151 1660 aa12.47□□□□□ -0.41
NPC1-204ENST00000586718 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
NPC1-204ENST00000586718 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
NPC1-204ENST00000586718 MROH1Q8NDA8 1641 aa12.45□□□□□ -0.42
NPC1-204ENST00000586718 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
NPC1-204ENST00000586718 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
NPC1-204ENST00000586718 CEP152O94986 1710 aa12.44□□□□□ -0.42
NPC1-204ENST00000586718 ATP10AO60312 1499 aa12.44□□□□□ -0.42
NPC1-204ENST00000586718 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
NPC1-204ENST00000586718 AGLP35573 1532 aa12.42□□□□□ -0.42
NPC1-204ENST00000586718 EFCAB6Q5THR3 1501 aa12.42□□□□□ -0.42
NPC1-204ENST00000586718 COL17A1Q9UMD9 1497 aaPredicted RBP12.41□□□□□ -0.42
NPC1-204ENST00000586718 KIF3BO15066 747 aa12.41□□□□□ -0.42
NPC1-204ENST00000586718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.429e-8■□□□□ 9.1
NPC1-204ENST00000586718 LMTK2Q8IWU2 1503 aa12.41□□□□□ -0.42
NPC1-204ENST00000586718 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
NPC1-204ENST00000586718 E9PCH4 1651 aa12.4□□□□□ -0.42
NPC1-204ENST00000586718 CAMSAP1Q5T5Y3 1602 aa12.4□□□□□ -0.42
NPC1-204ENST00000586718 ABCC3O15438 1527 aa12.38□□□□□ -0.43
NPC1-204ENST00000586718 PKD2Q13563 968 aa12.38□□□□□ -0.43
NPC1-204ENST00000586718 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
NPC1-204ENST00000586718 TRPM2O94759 1503 aa12.37□□□□□ -0.43
NPC1-204ENST00000586718 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
NPC1-204ENST00000586718 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
NPC1-204ENST00000586718 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
NPC1-204ENST00000586718 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
NPC1-204ENST00000586718 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
NPC1-204ENST00000586718 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
NPC1-204ENST00000586718 CLTCQ00610 1675 aaKnown RBP12.33□□□□□ -0.44
NPC1-204ENST00000586718 FOXD1Q16676 465 aa12.33□□□□□ -0.44
NPC1-204ENST00000586718 GGT6Q6P531 493 aa12.33□□□□□ -0.44
NPC1-204ENST00000586718 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
NPC1-204ENST00000586718 WASHC2CQ9Y4E1 1318 aa12.31□□□□□ -0.44
NPC1-204ENST00000586718 MROH2AA6NES4 1674 aa12.3□□□□□ -0.44
NPC1-204ENST00000586718 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
NPC1-204ENST00000586718 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
NPC1-204ENST00000586718 FER1L4A9Z1Z3 1794 aa12.29□□□□□ -0.44
NPC1-204ENST00000586718 PPP6R1Q9UPN7 881 aa12.29□□□□□ -0.44
NPC1-204ENST00000586718 KIF1BO60333 1816 aa12.29□□□□□ -0.44
NPC1-204ENST00000586718 PTPRTO14522 1441 aa12.28□□□□□ -0.44
NPC1-204ENST00000586718 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
NPC1-204ENST00000586718 CNTLNQ9NXG0 1405 aa12.28□□□□□ -0.44
NPC1-204ENST00000586718 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
NPC1-204ENST00000586718 NPATQ14207 1427 aa12.28□□□□□ -0.44
NPC1-204ENST00000586718 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
NPC1-204ENST00000586718 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
NPC1-204ENST00000586718 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
NPC1-204ENST00000586718 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
NPC1-204ENST00000586718 SYNMO15061 1565 aa12.23□□□□□ -0.45
NPC1-204ENST00000586718 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
NPC1-204ENST00000586718 MLECQ14165 292 aa12.23□□□□□ -0.45
NPC1-204ENST00000586718 CFAP65Q6ZU64 1925 aaKnown RBP12.23□□□□□ -0.45
NPC1-204ENST00000586718 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
NPC1-204ENST00000586718 ADGRB3O60242 1522 aa12.22□□□□□ -0.45
NPC1-204ENST00000586718 NOS1P29475 1434 aa12.22□□□□□ -0.45
NPC1-204ENST00000586718 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
NPC1-204ENST00000586718 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
NPC1-204ENST00000586718 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
NPC1-204ENST00000586718 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
NPC1-204ENST00000586718 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
NPC1-204ENST00000586718 C3P01024 1663 aa12.19□□□□□ -0.46
NPC1-204ENST00000586718 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
NPC1-204ENST00000586718 RIMS1Q86UR5 1692 aaKnown RBP12.18□□□□□ -0.46
NPC1-204ENST00000586718 UHRF1BP1Q6BDS2 1440 aa12.17□□□□□ -0.46
NPC1-204ENST00000586718 MYOM2P54296 1465 aa12.16□□□□□ -0.46
NPC1-204ENST00000586718 RALGAPBQ86X10 1494 aa12.16□□□□□ -0.46
NPC1-204ENST00000586718 PPLO60437 1756 aa12.16□□□□□ -0.46
NPC1-204ENST00000586718 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
NPC1-204ENST00000586718 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
NPC1-204ENST00000586718 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.46
NPC1-204ENST00000586718 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
NPC1-204ENST00000586718 MYO5BQ9ULV0 1848 aa12.14□□□□□ -0.47
NPC1-204ENST00000586718 TMEM131LA2VDJ0 1609 aa12.14□□□□□ -0.47
NPC1-204ENST00000586718 LAMC1P11047 1609 aa12.14□□□□□ -0.47
NPC1-204ENST00000586718 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
NPC1-204ENST00000586718 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
NPC1-204ENST00000586718 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
NPC1-204ENST00000586718 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
NPC1-204ENST00000586718 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
NPC1-204ENST00000586718 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
NPC1-204ENST00000586718 TNRQ92752 1358 aa12.13□□□□□ -0.47
NPC1-204ENST00000586718 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
NPC1-204ENST00000586718 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
NPC1-204ENST00000586718 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
NPC1-204ENST00000586718 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
NPC1-204ENST00000586718 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
NPC1-204ENST00000586718 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
NPC1-204ENST00000586718 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
NPC1-204ENST00000586718 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
NPC1-204ENST00000586718 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
NPC1-204ENST00000586718 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
NPC1-204ENST00000586718 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms