RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
LAMA3-205ENST00000586709 LMTK3Q96Q04 1460 aa15.64■□□□□ 0.09
LAMA3-205ENST00000586709 MAST1Q9Y2H9 1570 aa15.63■□□□□ 0.09
LAMA3-205ENST00000586709 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
LAMA3-205ENST00000586709 PTPN23Q9H3S7 1636 aa15.63■□□□□ 0.09
LAMA3-205ENST00000586709 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
LAMA3-205ENST00000586709 CROCC2H7BZ55 1655 aa15.62■□□□□ 0.09
LAMA3-205ENST00000586709 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
LAMA3-205ENST00000586709 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
LAMA3-205ENST00000586709 DHX29Q7Z478 1369 aaKnown RBP15.58■□□□□ 0.08
LAMA3-205ENST00000586709 ABCB7O75027 752 aa15.57■□□□□ 0.08
LAMA3-205ENST00000586709 TSPY4P0CV99 314 aa15.57■□□□□ 0.08
LAMA3-205ENST00000586709 TSPY10P0CW01 314 aa15.57■□□□□ 0.08
LAMA3-205ENST00000586709 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
LAMA3-205ENST00000586709 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
LAMA3-205ENST00000586709 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
LAMA3-205ENST00000586709 TCOF1Q13428 1488 aaKnown RBP15.55■□□□□ 0.08
LAMA3-205ENST00000586709 EIF2AK4Q9P2K8 1649 aaKnown RBP15.54■□□□□ 0.08
LAMA3-205ENST00000586709 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
LAMA3-205ENST00000586709 GGT6Q6P531 493 aa15.53■□□□□ 0.08
LAMA3-205ENST00000586709 RNF17Q9BXT8 1623 aaKnown RBP15.53■□□□□ 0.08
LAMA3-205ENST00000586709 FAM135AQ9P2D6 1515 aa15.53■□□□□ 0.08
LAMA3-205ENST00000586709 UHRF1BP1Q6BDS2 1440 aa15.52■□□□□ 0.08
LAMA3-205ENST00000586709 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
LAMA3-205ENST00000586709 ABCC5O15440 1437 aa15.51■□□□□ 0.07
LAMA3-205ENST00000586709 NPATQ14207 1427 aa15.51■□□□□ 0.07
LAMA3-205ENST00000586709 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
LAMA3-205ENST00000586709 DUOX2Q9NRD8 1548 aa15.5■□□□□ 0.07
LAMA3-205ENST00000586709 KIF3BO15066 747 aa15.5■□□□□ 0.07
LAMA3-205ENST00000586709 HSPA2P54652 639 aa15.5■□□□□ 0.07
LAMA3-205ENST00000586709 DAPK1P53355 1430 aa15.5■□□□□ 0.07
LAMA3-205ENST00000586709 ZNF142P52746 1687 aaPredicted RBP15.49■□□□□ 0.07
LAMA3-205ENST00000586709 ZC3H13Q5T200 1668 aaKnown RBP15.49■□□□□ 0.07
LAMA3-205ENST00000586709 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
LAMA3-205ENST00000586709 MYO3AQ8NEV4 1616 aa15.49■□□□□ 0.07
LAMA3-205ENST00000586709 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
LAMA3-205ENST00000586709 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
LAMA3-205ENST00000586709 CEP152O94986 1710 aa15.47■□□□□ 0.07
LAMA3-205ENST00000586709 MROH1Q8NDA8 1641 aa15.46■□□□□ 0.07
LAMA3-205ENST00000586709 PTPRKQ15262 1439 aa15.46■□□□□ 0.07
LAMA3-205ENST00000586709 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
LAMA3-205ENST00000586709 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
LAMA3-205ENST00000586709 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
LAMA3-205ENST00000586709 PZPP20742 1482 aa15.43■□□□□ 0.06
LAMA3-205ENST00000586709 CEP170BQ9Y4F5 1589 aaPredicted RBP15.43■□□□□ 0.06
LAMA3-205ENST00000586709 ABCC3O15438 1527 aa15.43■□□□□ 0.06
LAMA3-205ENST00000586709 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
LAMA3-205ENST00000586709 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
LAMA3-205ENST00000586709 PRDM15P57071 1507 aaPredicted RBP15.42■□□□□ 0.06
LAMA3-205ENST00000586709 WASHC2CQ9Y4E1 1318 aa15.42■□□□□ 0.06
LAMA3-205ENST00000586709 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
LAMA3-205ENST00000586709 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
LAMA3-205ENST00000586709 FAM50AQ14320 339 aaKnown RBP15.4■□□□□ 0.06
LAMA3-205ENST00000586709 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
LAMA3-205ENST00000586709 NCOA1Q15788 1441 aa15.39■□□□□ 0.05
LAMA3-205ENST00000586709 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
LAMA3-205ENST00000586709 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
LAMA3-205ENST00000586709 TNRQ92752 1358 aa15.36■□□□□ 0.05
LAMA3-205ENST00000586709 A2ML1A8K2U0 1454 aa15.36■□□□□ 0.05
LAMA3-205ENST00000586709 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
LAMA3-205ENST00000586709 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
LAMA3-205ENST00000586709 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
LAMA3-205ENST00000586709 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
LAMA3-205ENST00000586709 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
LAMA3-205ENST00000586709 PLA2R1Q13018 1463 aa15.33■□□□□ 0.05
LAMA3-205ENST00000586709 VWDEQ8N2E2 1590 aa15.33■□□□□ 0.05
LAMA3-205ENST00000586709 PTPRTO14522 1441 aa15.33■□□□□ 0.04
LAMA3-205ENST00000586709 ERVK-7P63135 1459 aa15.33■□□□□ 0.04
LAMA3-205ENST00000586709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
LAMA3-205ENST00000586709 NLRP1Q9C000 1473 aa15.32■□□□□ 0.04
LAMA3-205ENST00000586709 KANK1Q14678 1352 aa15.31■□□□□ 0.04
LAMA3-205ENST00000586709 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
LAMA3-205ENST00000586709 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
LAMA3-205ENST00000586709 ANKRD50Q9ULJ7 1429 aa15.3■□□□□ 0.04
LAMA3-205ENST00000586709 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
LAMA3-205ENST00000586709 UBR1Q8IWV7 1749 aa15.29■□□□□ 0.04
LAMA3-205ENST00000586709 UNC13BO14795 1591 aa15.28■□□□□ 0.04
LAMA3-205ENST00000586709 ROCK1Q13464 1354 aa15.28■□□□□ 0.04
LAMA3-205ENST00000586709 ILDR1Q86SU0 546 aaPredicted RBP15.28■□□□□ 0.04
LAMA3-205ENST00000586709 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
LAMA3-205ENST00000586709 EFCAB6Q5THR3 1501 aa15.27■□□□□ 0.04
LAMA3-205ENST00000586709 TET3O43151 1660 aa15.27■□□□□ 0.03
LAMA3-205ENST00000586709 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
LAMA3-205ENST00000586709 NCKAP5LQ9HCH0 1330 aa15.26■□□□□ 0.03
LAMA3-205ENST00000586709 PKD2Q13563 968 aa15.26■□□□□ 0.03
LAMA3-205ENST00000586709 NEURL4Q96JN8 1562 aa15.25■□□□□ 0.03
LAMA3-205ENST00000586709 PIK3C2BO00750 1634 aa15.24■□□□□ 0.03
LAMA3-205ENST00000586709 KDM5AP29375 1690 aaKnown RBP15.23■□□□□ 0.03
LAMA3-205ENST00000586709 ITGAEP38570 1179 aa15.23■□□□□ 0.03
LAMA3-205ENST00000586709 IQGAP3Q86VI3 1631 aa15.23■□□□□ 0.03
LAMA3-205ENST00000586709 LTBP4Q8N2S1 1624 aa15.22■□□□□ 0.03
LAMA3-205ENST00000586709 THEMISQ8N1K5 641 aaPredicted RBP15.22■□□□□ 0.03
LAMA3-205ENST00000586709 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
LAMA3-205ENST00000586709 SYNMO15061 1565 aa15.22■□□□□ 0.03
LAMA3-205ENST00000586709 CERKQ8TCT0 537 aa15.21■□□□□ 0.03
LAMA3-205ENST00000586709 IQGAP1P46940 1657 aa15.21■□□□□ 0.03
LAMA3-205ENST00000586709 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
LAMA3-205ENST00000586709 E9PCH4 1651 aa15.2■□□□□ 0.02
LAMA3-205ENST00000586709 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
LAMA3-205ENST00000586709 NOS1P29475 1434 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms