RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 KDM5DQ9BY66 1539 aa26.51■■□□□ 1.83
TRIM47-203ENST00000586495 CAMSAP1Q5T5Y3 1602 aa26.5■■□□□ 1.83
TRIM47-203ENST00000586495 MYO3AQ8NEV4 1616 aa26.49■■□□□ 1.83
TRIM47-203ENST00000586495 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
TRIM47-203ENST00000586495 CEP170BQ9Y4F5 1589 aaPredicted RBP26.46■■□□□ 1.83
TRIM47-203ENST00000586495 PZPP20742 1482 aa26.45■■□□□ 1.82
TRIM47-203ENST00000586495 PKD2Q13563 968 aa26.44■■□□□ 1.82
TRIM47-203ENST00000586495 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
TRIM47-203ENST00000586495 TNRQ92752 1358 aa26.44■■□□□ 1.82
TRIM47-203ENST00000586495 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
TRIM47-203ENST00000586495 PLA2R1Q13018 1463 aa26.43■■□□□ 1.82
TRIM47-203ENST00000586495 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
TRIM47-203ENST00000586495 NCKAP5LQ9HCH0 1330 aa26.42■■□□□ 1.82
TRIM47-203ENST00000586495 FGD6Q6ZV73 1430 aa26.41■■□□□ 1.82
TRIM47-203ENST00000586495 EIF2AK4Q9P2K8 1649 aaKnown RBP26.41■■□□□ 1.82
TRIM47-203ENST00000586495 ABCC5O15440 1437 aa26.4■■□□□ 1.82
TRIM47-203ENST00000586495 DUOX2Q9NRD8 1548 aa26.4■■□□□ 1.82
TRIM47-203ENST00000586495 RNF17Q9BXT8 1623 aaKnown RBP26.4■■□□□ 1.82
TRIM47-203ENST00000586495 SHANK2Q9UPX8 1470 aa26.4■■□□□ 1.82
TRIM47-203ENST00000586495 TCOF1Q13428 1488 aaKnown RBP26.38■■□□□ 1.81
TRIM47-203ENST00000586495 KIF15Q9NS87 1388 aa26.37■■□□□ 1.81
TRIM47-203ENST00000586495 DAPK1P53355 1430 aa26.37■■□□□ 1.81
TRIM47-203ENST00000586495 RRP7BPQ9NSQ0 103 aa26.36■■□□□ 1.81
TRIM47-203ENST00000586495 DNMT1P26358 1616 aaKnown RBP26.35■■□□□ 1.81
TRIM47-203ENST00000586495 ZC3H13Q5T200 1668 aaKnown RBP26.34■■□□□ 1.81
TRIM47-203ENST00000586495 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
TRIM47-203ENST00000586495 ABCC3O15438 1527 aa26.34■■□□□ 1.81
TRIM47-203ENST00000586495 ERBINQ96RT1 1412 aa26.32■■□□□ 1.8
TRIM47-203ENST00000586495 NLRP1Q9C000 1473 aa26.32■■□□□ 1.8
TRIM47-203ENST00000586495 ANKRD30AQ9BXX3 1397 aa26.31■■□□□ 1.8
TRIM47-203ENST00000586495 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
TRIM47-203ENST00000586495 THEMISQ8N1K5 641 aaPredicted RBP26.3■■□□□ 1.8
TRIM47-203ENST00000586495 CHIC2Q9UKJ5 165 aa26.29■■□□□ 1.8
TRIM47-203ENST00000586495 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
TRIM47-203ENST00000586495 IQSEC2Q5JU85 1478 aa26.25■■□□□ 1.79
TRIM47-203ENST00000586495 ZNF335Q9H4Z2 1342 aaPredicted RBP26.25■■□□□ 1.79
TRIM47-203ENST00000586495 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
TRIM47-203ENST00000586495 ANKLE2Q86XL3 938 aa26.25■■□□□ 1.79
TRIM47-203ENST00000586495 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
TRIM47-203ENST00000586495 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
TRIM47-203ENST00000586495 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
TRIM47-203ENST00000586495 KANK1Q14678 1352 aa26.23■■□□□ 1.79
TRIM47-203ENST00000586495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.23■■□□□ 1.79
TRIM47-203ENST00000586495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.79
TRIM47-203ENST00000586495 PRDM15P57071 1507 aaPredicted RBP26.23■■□□□ 1.79
TRIM47-203ENST00000586495 CEP152O94986 1710 aa26.22■■□□□ 1.79
TRIM47-203ENST00000586495 ARHGAP31Q2M1Z3 1444 aa26.21■■□□□ 1.79
TRIM47-203ENST00000586495 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
TRIM47-203ENST00000586495 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
TRIM47-203ENST00000586495 CFAP65Q6ZU64 1925 aaKnown RBP26.16■■□□□ 1.78
TRIM47-203ENST00000586495 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
TRIM47-203ENST00000586495 NEURL4Q96JN8 1562 aa26.15■■□□□ 1.78
TRIM47-203ENST00000586495 NPHP4O75161 1426 aaPredicted RBP26.12■■□□□ 1.77
TRIM47-203ENST00000586495 MED14O60244 1454 aa26.11■■□□□ 1.77
TRIM47-203ENST00000586495 LMTK2Q8IWU2 1503 aa26.1■■□□□ 1.77
TRIM47-203ENST00000586495 ANKRD50Q9ULJ7 1429 aa26.08■■□□□ 1.77
TRIM47-203ENST00000586495 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
TRIM47-203ENST00000586495 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
TRIM47-203ENST00000586495 CPS1P31327 1500 aa26.05■■□□□ 1.76
TRIM47-203ENST00000586495 STAG3Q9UJ98 1225 aa26.05■■□□□ 1.76
TRIM47-203ENST00000586495 UBR1Q8IWV7 1749 aa26.05■■□□□ 1.76
TRIM47-203ENST00000586495 IQGAP1P46940 1657 aa26.02■■□□□ 1.76
TRIM47-203ENST00000586495 TXNDC2Q86VQ3 553 aa26.01■■□□□ 1.75
TRIM47-203ENST00000586495 EID1Q9Y6B2 187 aa26.01■■□□□ 1.75
TRIM47-203ENST00000586495 SCAF11Q99590 1463 aaKnown RBP26■■□□□ 1.75
TRIM47-203ENST00000586495 ROCK1Q13464 1354 aa25.99■■□□□ 1.75
TRIM47-203ENST00000586495 IDI1Q13907 227 aa25.99■■□□□ 1.75
TRIM47-203ENST00000586495 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
TRIM47-203ENST00000586495 SLIT1O75093 1534 aa25.98■■□□□ 1.75
TRIM47-203ENST00000586495 EFCAB6Q5THR3 1501 aa25.98■■□□□ 1.75
TRIM47-203ENST00000586495 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
TRIM47-203ENST00000586495 LTKP29376 864 aa25.97■■□□□ 1.75
TRIM47-203ENST00000586495 NOS1P29475 1434 aa25.97■■□□□ 1.75
TRIM47-203ENST00000586495 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
TRIM47-203ENST00000586495 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
TRIM47-203ENST00000586495 TOM1O60784 492 aa25.95■■□□□ 1.74
TRIM47-203ENST00000586495 RPRD2Q5VT52 1461 aaKnown RBP25.95■■□□□ 1.74
TRIM47-203ENST00000586495 TMEM2Q9UHN6 1383 aa25.95■■□□□ 1.74
TRIM47-203ENST00000586495 ITGAEP38570 1179 aa25.94■■□□□ 1.74
TRIM47-203ENST00000586495 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
TRIM47-203ENST00000586495 SYNMO15061 1565 aa25.91■■□□□ 1.74
TRIM47-203ENST00000586495 TET3O43151 1660 aa25.89■■□□□ 1.73
TRIM47-203ENST00000586495 UNC13BO14795 1591 aa25.88■■□□□ 1.73
TRIM47-203ENST00000586495 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
TRIM47-203ENST00000586495 PIP4K2BP78356 416 aa25.85■■□□□ 1.73
TRIM47-203ENST00000586495 ADGRB3O60242 1522 aa25.84■■□□□ 1.73
TRIM47-203ENST00000586495 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
TRIM47-203ENST00000586495 LRRC7Q96NW7 1537 aa25.83■■□□□ 1.73
TRIM47-203ENST00000586495 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
TRIM47-203ENST00000586495 NUP155O75694 1391 aa25.82■■□□□ 1.72
TRIM47-203ENST00000586495 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
TRIM47-203ENST00000586495 HDGFP51858 240 aaKnown RBP25.81■■□□□ 1.72
TRIM47-203ENST00000586495 IQGAP3Q86VI3 1631 aa25.79■■□□□ 1.72
TRIM47-203ENST00000586495 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
TRIM47-203ENST00000586495 BCANQ96GW7 911 aa25.77■■□□□ 1.72
TRIM47-203ENST00000586495 SLC26A8Q96RN1 970 aa25.76■■□□□ 1.71
TRIM47-203ENST00000586495 E9PCH4 1651 aa25.75■■□□□ 1.71
TRIM47-203ENST00000586495 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
TRIM47-203ENST00000586495 PPP1R15AO75807 674 aaPredicted RBP25.74■■□□□ 1.71
TRIM47-203ENST00000586495 KCNA6P17658 529 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms