RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
ATG4D-205ENST00000586477 DAPK1P53355 1430 aa24.72■■□□□ 1.55
ATG4D-205ENST00000586477 FBXO41Q8TF61 875 aa24.71■■□□□ 1.55
ATG4D-205ENST00000586477 MROH1Q8NDA8 1641 aa24.71■■□□□ 1.55
ATG4D-205ENST00000586477 EIF2AK4Q9P2K8 1649 aaKnown RBP24.71■■□□□ 1.55
ATG4D-205ENST00000586477 KDM5DQ9BY66 1539 aa24.7■■□□□ 1.54
ATG4D-205ENST00000586477 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.54
ATG4D-205ENST00000586477 MYO3AQ8NEV4 1616 aa24.69■■□□□ 1.54
ATG4D-205ENST00000586477 DUOX2Q9NRD8 1548 aa24.67■■□□□ 1.54
ATG4D-205ENST00000586477 ZNF142P52746 1687 aaPredicted RBP24.66■■□□□ 1.54
ATG4D-205ENST00000586477 KIF15Q9NS87 1388 aa24.64■■□□□ 1.53
ATG4D-205ENST00000586477 ABCC3O15438 1527 aa24.63■■□□□ 1.53
ATG4D-205ENST00000586477 PPARGC1BQ86YN6 1023 aaKnown RBP24.63■■□□□ 1.53
ATG4D-205ENST00000586477 PZPP20742 1482 aa24.63■■□□□ 1.53
ATG4D-205ENST00000586477 FBXO31Q5XUX0 539 aaPredicted RBP24.62■■□□□ 1.53
ATG4D-205ENST00000586477 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
ATG4D-205ENST00000586477 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
ATG4D-205ENST00000586477 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
ATG4D-205ENST00000586477 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
ATG4D-205ENST00000586477 CEP152O94986 1710 aa24.6■■□□□ 1.53
ATG4D-205ENST00000586477 ZC3H13Q5T200 1668 aaKnown RBP24.59■■□□□ 1.53
ATG4D-205ENST00000586477 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
ATG4D-205ENST00000586477 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
ATG4D-205ENST00000586477 CHIC2Q9UKJ5 165 aa24.58■■□□□ 1.53
ATG4D-205ENST00000586477 ERBINQ96RT1 1412 aa24.58■■□□□ 1.53
ATG4D-205ENST00000586477 ADGRL2O95490 1459 aa24.57■■□□□ 1.52
ATG4D-205ENST00000586477 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
ATG4D-205ENST00000586477 PRDM15P57071 1507 aaPredicted RBP24.56■■□□□ 1.52
ATG4D-205ENST00000586477 TNRQ92752 1358 aa24.54■■□□□ 1.52
ATG4D-205ENST00000586477 A2ML1A8K2U0 1454 aa24.54■■□□□ 1.52
ATG4D-205ENST00000586477 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
ATG4D-205ENST00000586477 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
ATG4D-205ENST00000586477 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
ATG4D-205ENST00000586477 PTPRTO14522 1441 aa24.52■■□□□ 1.52
ATG4D-205ENST00000586477 SPATA31D1Q6ZQQ2 1576 aa24.5■■□□□ 1.51
ATG4D-205ENST00000586477 CFAP65Q6ZU64 1925 aaKnown RBP24.5■■□□□ 1.51
ATG4D-205ENST00000586477 PLA2R1Q13018 1463 aa24.5■■□□□ 1.51
ATG4D-205ENST00000586477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.49■■□□□ 1.51
ATG4D-205ENST00000586477 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
ATG4D-205ENST00000586477 VWDEQ8N2E2 1590 aa24.48■■□□□ 1.51
ATG4D-205ENST00000586477 ERVK-7P63135 1459 aa24.47■■□□□ 1.51
ATG4D-205ENST00000586477 NCKAP5LQ9HCH0 1330 aa24.47■■□□□ 1.51
ATG4D-205ENST00000586477 NLRP1Q9C000 1473 aa24.44■■□□□ 1.5
ATG4D-205ENST00000586477 ARHGAP31Q2M1Z3 1444 aa24.44■■□□□ 1.5
ATG4D-205ENST00000586477 LMTK2Q8IWU2 1503 aa24.42■■□□□ 1.5
ATG4D-205ENST00000586477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.5
ATG4D-205ENST00000586477 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
ATG4D-205ENST00000586477 NEURL4Q96JN8 1562 aa24.41■■□□□ 1.5
ATG4D-205ENST00000586477 POLR1AO95602 1720 aaPredicted RBP24.39■■□□□ 1.5
ATG4D-205ENST00000586477 ANKRD50Q9ULJ7 1429 aa24.39■■□□□ 1.5
ATG4D-205ENST00000586477 UGGT1Q9NYU2 1555 aa24.38■■□□□ 1.49
ATG4D-205ENST00000586477 PKD2Q13563 968 aa24.38■■□□□ 1.49
ATG4D-205ENST00000586477 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
ATG4D-205ENST00000586477 KANK1Q14678 1352 aa24.35■■□□□ 1.49
ATG4D-205ENST00000586477 UBR1Q8IWV7 1749 aa24.35■■□□□ 1.49
ATG4D-205ENST00000586477 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
ATG4D-205ENST00000586477 UNC13BO14795 1591 aa24.33■■□□□ 1.48
ATG4D-205ENST00000586477 SYNMO15061 1565 aa24.31■■□□□ 1.48
ATG4D-205ENST00000586477 THEMISQ8N1K5 641 aaPredicted RBP24.3■■□□□ 1.48
ATG4D-205ENST00000586477 ITGAEP38570 1179 aa24.29■■□□□ 1.48
ATG4D-205ENST00000586477 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-205ENST00000586477 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
ATG4D-205ENST00000586477 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
ATG4D-205ENST00000586477 NOS1P29475 1434 aa24.27■■□□□ 1.48
ATG4D-205ENST00000586477 TET3O43151 1660 aa24.27■■□□□ 1.48
ATG4D-205ENST00000586477 MED14O60244 1454 aa24.26■■□□□ 1.47
ATG4D-205ENST00000586477 ANKLE2Q86XL3 938 aa24.24■■□□□ 1.47
ATG4D-205ENST00000586477 ARHGAP23Q9P227 1491 aa24.24■■□□□ 1.47
ATG4D-205ENST00000586477 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
ATG4D-205ENST00000586477 IQGAP3Q86VI3 1631 aa24.22■■□□□ 1.47
ATG4D-205ENST00000586477 SLIT1O75093 1534 aa24.22■■□□□ 1.47
ATG4D-205ENST00000586477 IQGAP1P46940 1657 aa24.21■■□□□ 1.47
ATG4D-205ENST00000586477 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
ATG4D-205ENST00000586477 NPHP4O75161 1426 aaPredicted RBP24.21■■□□□ 1.47
ATG4D-205ENST00000586477 KDM5AP29375 1690 aaKnown RBP24.21■■□□□ 1.47
ATG4D-205ENST00000586477 IDI1Q13907 227 aa24.2■■□□□ 1.46
ATG4D-205ENST00000586477 E9PCH4 1651 aa24.2■■□□□ 1.46
ATG4D-205ENST00000586477 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
ATG4D-205ENST00000586477 LTKP29376 864 aa24.17■■□□□ 1.46
ATG4D-205ENST00000586477 SCAF11Q99590 1463 aaKnown RBP24.15■■□□□ 1.46
ATG4D-205ENST00000586477 STRCP1A6NGW2 1772 aa24.15■■□□□ 1.46
ATG4D-205ENST00000586477 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
ATG4D-205ENST00000586477 ADGRB3O60242 1522 aa24.14■■□□□ 1.45
ATG4D-205ENST00000586477 NAIPQ13075 1403 aa24.13■■□□□ 1.45
ATG4D-205ENST00000586477 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
ATG4D-205ENST00000586477 NUP155O75694 1391 aa24.12■■□□□ 1.45
ATG4D-205ENST00000586477 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
ATG4D-205ENST00000586477 SLC52A1Q9NWF4 448 aa24.09■■□□□ 1.45
ATG4D-205ENST00000586477 CPS1P31327 1500 aa24.09■■□□□ 1.45
ATG4D-205ENST00000586477 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.45
ATG4D-205ENST00000586477 HFM1A2PYH4 1435 aa24.05■■□□□ 1.44
ATG4D-205ENST00000586477 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
ATG4D-205ENST00000586477 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
ATG4D-205ENST00000586477 ACIN1Q9UKV3 1341 aaKnown RBP24.04■■□□□ 1.44
ATG4D-205ENST00000586477 ZFYVE9O95405 1425 aa24.02■■□□□ 1.44
ATG4D-205ENST00000586477 EID1Q9Y6B2 187 aa24.01■■□□□ 1.43
ATG4D-205ENST00000586477 SPHKAPQ2M3C7 1700 aa24■■□□□ 1.43
ATG4D-205ENST00000586477 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
ATG4D-205ENST00000586477 ALKQ9UM73 1620 aa23.99■■□□□ 1.43
ATG4D-205ENST00000586477 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms