RNA–Protein interactions for RNA: ENST00000586410.2

TCF3-209, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-209ENST00000586410 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
TCF3-209ENST00000586410 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
TCF3-209ENST00000586410 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
TCF3-209ENST00000586410 RRBP1Q9P2E9 1410 aaKnown RBP20.78■□□□□ 0.92
TCF3-209ENST00000586410 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
TCF3-209ENST00000586410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.77■□□□□ 0.924e-6■□□□□ 8.2
TCF3-209ENST00000586410 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
TCF3-209ENST00000586410 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
TCF3-209ENST00000586410 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
TCF3-209ENST00000586410 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
TCF3-209ENST00000586410 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
TCF3-209ENST00000586410 ESF1Q9H501 851 aaKnown RBP20.75■□□□□ 0.91
TCF3-209ENST00000586410 RRP7BPQ9NSQ0 103 aa20.75■□□□□ 0.91
TCF3-209ENST00000586410 SETD1BQ9UPS6 1966 aaKnown RBP20.75■□□□□ 0.91
TCF3-209ENST00000586410 PRDM15P57071 1507 aaPredicted RBP20.73■□□□□ 0.91
TCF3-209ENST00000586410 ZC3H13Q5T200 1668 aaKnown RBP20.73■□□□□ 0.91
TCF3-209ENST00000586410 ABCC3O15438 1527 aa20.73■□□□□ 0.91
TCF3-209ENST00000586410 NPATQ14207 1427 aa20.71■□□□□ 0.91
TCF3-209ENST00000586410 CEP152O94986 1710 aa20.7■□□□□ 0.9
TCF3-209ENST00000586410 ROCK1Q13464 1354 aa20.68■□□□□ 0.9
TCF3-209ENST00000586410 PZPP20742 1482 aa20.68■□□□□ 0.9
TCF3-209ENST00000586410 MYO3AQ8NEV4 1616 aa20.67■□□□□ 0.9
TCF3-209ENST00000586410 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
TCF3-209ENST00000586410 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
TCF3-209ENST00000586410 CAMSAP1Q5T5Y3 1602 aa20.66■□□□□ 0.9
TCF3-209ENST00000586410 ANKRD50Q9ULJ7 1429 aa20.65■□□□□ 0.9
TCF3-209ENST00000586410 WASHC2CQ9Y4E1 1318 aa20.65■□□□□ 0.9
TCF3-209ENST00000586410 ZNF142P52746 1687 aaPredicted RBP20.64■□□□□ 0.9
TCF3-209ENST00000586410 HSPA2P54652 639 aa20.63■□□□□ 0.89
TCF3-209ENST00000586410 ITGAEP38570 1179 aa20.61■□□□□ 0.89
TCF3-209ENST00000586410 UNC13BO14795 1591 aa20.6■□□□□ 0.89
TCF3-209ENST00000586410 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
TCF3-209ENST00000586410 CEP170BQ9Y4F5 1589 aaPredicted RBP20.59■□□□□ 0.89
TCF3-209ENST00000586410 FBXO31Q5XUX0 539 aaPredicted RBP20.59■□□□□ 0.89
TCF3-209ENST00000586410 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
TCF3-209ENST00000586410 ARHGAP31Q2M1Z3 1444 aa20.57■□□□□ 0.88
TCF3-209ENST00000586410 STRCQ7RTU9 1775 aa20.57■□□□□ 0.88
TCF3-209ENST00000586410 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
TCF3-209ENST00000586410 TNRQ92752 1358 aa20.56■□□□□ 0.88
TCF3-209ENST00000586410 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
TCF3-209ENST00000586410 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
TCF3-209ENST00000586410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
TCF3-209ENST00000586410 KANK1Q14678 1352 aa20.54■□□□□ 0.88
TCF3-209ENST00000586410 CFAP65Q6ZU64 1925 aaKnown RBP20.54■□□□□ 0.88
TCF3-209ENST00000586410 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
TCF3-209ENST00000586410 NAIPQ13075 1403 aa20.52■□□□□ 0.87
TCF3-209ENST00000586410 TET3O43151 1660 aa20.51■□□□□ 0.87
TCF3-209ENST00000586410 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
TCF3-209ENST00000586410 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
TCF3-209ENST00000586410 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
TCF3-209ENST00000586410 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
TCF3-209ENST00000586410 SYNMO15061 1565 aa20.46■□□□□ 0.87
TCF3-209ENST00000586410 E9PCH4 1651 aa20.45■□□□□ 0.86
TCF3-209ENST00000586410 NOS1P29475 1434 aa20.44■□□□□ 0.86
TCF3-209ENST00000586410 RPRD2Q5VT52 1461 aaKnown RBP20.43■□□□□ 0.86
TCF3-209ENST00000586410 UGGT1Q9NYU2 1555 aa20.43■□□□□ 0.86
TCF3-209ENST00000586410 UBR1Q8IWV7 1749 aa20.43■□□□□ 0.86
TCF3-209ENST00000586410 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
TCF3-209ENST00000586410 NUP155O75694 1391 aa20.4■□□□□ 0.86
TCF3-209ENST00000586410 POLR1AO95602 1720 aaPredicted RBP20.4■□□□□ 0.86
TCF3-209ENST00000586410 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
TCF3-209ENST00000586410 PTPRTO14522 1441 aa20.38■□□□□ 0.85
TCF3-209ENST00000586410 KDM5AP29375 1690 aaKnown RBP20.37■□□□□ 0.85
TCF3-209ENST00000586410 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
TCF3-209ENST00000586410 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
TCF3-209ENST00000586410 ARHGAP23Q9P227 1491 aa20.32■□□□□ 0.84
TCF3-209ENST00000586410 PKD2Q13563 968 aa20.32■□□□□ 0.84
TCF3-209ENST00000586410 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
TCF3-209ENST00000586410 SLIT1O75093 1534 aa20.32■□□□□ 0.84
TCF3-209ENST00000586410 SPHKAPQ2M3C7 1700 aa20.31■□□□□ 0.84
TCF3-209ENST00000586410 IDI1Q13907 227 aa20.31■□□□□ 0.84
TCF3-209ENST00000586410 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
TCF3-209ENST00000586410 MYO5BQ9ULV0 1848 aa20.3■□□□□ 0.84
TCF3-209ENST00000586410 MED14O60244 1454 aa20.29■□□□□ 0.84
TCF3-209ENST00000586410 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
TCF3-209ENST00000586410 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
TCF3-209ENST00000586410 LTBP4Q8N2S1 1624 aa20.26■□□□□ 0.83
TCF3-209ENST00000586410 IQGAP1P46940 1657 aa20.26■□□□□ 0.83
TCF3-209ENST00000586410 SCAF11Q99590 1463 aaKnown RBP20.24■□□□□ 0.83
TCF3-209ENST00000586410 TMEM2Q9UHN6 1383 aa20.24■□□□□ 0.83
TCF3-209ENST00000586410 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
TCF3-209ENST00000586410 NPHP4O75161 1426 aaPredicted RBP20.24■□□□□ 0.83
TCF3-209ENST00000586410 SETD5Q9C0A6 1442 aa20.24■□□□□ 0.83
TCF3-209ENST00000586410 TRPM2O94759 1503 aa20.23■□□□□ 0.83
TCF3-209ENST00000586410 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
TCF3-209ENST00000586410 LTKP29376 864 aa20.21■□□□□ 0.83
TCF3-209ENST00000586410 TRIM52Q96A61 297 aa20.21■□□□□ 0.83
TCF3-209ENST00000586410 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
TCF3-209ENST00000586410 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
TCF3-209ENST00000586410 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
TCF3-209ENST00000586410 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
TCF3-209ENST00000586410 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
TCF3-209ENST00000586410 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
TCF3-209ENST00000586410 CERKQ8TCT0 537 aa20.14■□□□□ 0.81
TCF3-209ENST00000586410 STRCP1A6NGW2 1772 aa20.13■□□□□ 0.81
TCF3-209ENST00000586410 RIMS2Q9UQ26 1411 aa20.13■□□□□ 0.81
TCF3-209ENST00000586410 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
TCF3-209ENST00000586410 KIF1BO60333 1816 aa20.11■□□□□ 0.81
TCF3-209ENST00000586410 FOXD1Q16676 465 aa20.11■□□□□ 0.81
TCF3-209ENST00000586410 MPHOSPH9Q99550 1183 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms