RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NAIPQ13075 1403 aa19■□□□□ 0.63
VMP1-202ENST00000585847 GCC2Q8IWJ2 1684 aa18.99■□□□□ 0.63
VMP1-202ENST00000585847 HSPA2P54652 639 aa18.99■□□□□ 0.63
VMP1-202ENST00000585847 EIF2AK4Q9P2K8 1649 aaKnown RBP18.99■□□□□ 0.63
VMP1-202ENST00000585847 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
VMP1-202ENST00000585847 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
VMP1-202ENST00000585847 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
VMP1-202ENST00000585847 HFM1A2PYH4 1435 aa18.97■□□□□ 0.63
VMP1-202ENST00000585847 ANKRD50Q9ULJ7 1429 aa18.97■□□□□ 0.63
VMP1-202ENST00000585847 RNF17Q9BXT8 1623 aaKnown RBP18.96■□□□□ 0.63
VMP1-202ENST00000585847 KIF3BO15066 747 aa18.94■□□□□ 0.62
VMP1-202ENST00000585847 DEPDC5O75140 1603 aa18.93■□□□□ 0.62
VMP1-202ENST00000585847 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
VMP1-202ENST00000585847 GGT6Q6P531 493 aa18.89■□□□□ 0.61
VMP1-202ENST00000585847 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.61
VMP1-202ENST00000585847 UNC13BO14795 1591 aa18.89■□□□□ 0.61
VMP1-202ENST00000585847 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
VMP1-202ENST00000585847 PREX1Q8TCU6 1659 aa18.87■□□□□ 0.61
VMP1-202ENST00000585847 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
VMP1-202ENST00000585847 KDM5DQ9BY66 1539 aa18.85■□□□□ 0.61
VMP1-202ENST00000585847 CERKQ8TCT0 537 aa18.85■□□□□ 0.61
VMP1-202ENST00000585847 CEP152O94986 1710 aa18.85■□□□□ 0.61
VMP1-202ENST00000585847 CLTCQ00610 1675 aaKnown RBP18.85■□□□□ 0.61
VMP1-202ENST00000585847 ABCC3O15438 1527 aa18.84■□□□□ 0.61
VMP1-202ENST00000585847 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
VMP1-202ENST00000585847 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
VMP1-202ENST00000585847 FAM135AQ9P2D6 1515 aa18.82■□□□□ 0.6
VMP1-202ENST00000585847 HRCP23327 699 aa18.81■□□□□ 0.6
VMP1-202ENST00000585847 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
VMP1-202ENST00000585847 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
VMP1-202ENST00000585847 LMTK2Q8IWU2 1503 aa18.8■□□□□ 0.6
VMP1-202ENST00000585847 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
VMP1-202ENST00000585847 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
VMP1-202ENST00000585847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.68e-7■□□□□ 10.1
VMP1-202ENST00000585847 C3P01024 1663 aa18.79■□□□□ 0.6
VMP1-202ENST00000585847 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
VMP1-202ENST00000585847 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
VMP1-202ENST00000585847 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
VMP1-202ENST00000585847 CAMSAP1Q5T5Y3 1602 aa18.78■□□□□ 0.6
VMP1-202ENST00000585847 CNTLNQ9NXG0 1405 aa18.77■□□□□ 0.6
VMP1-202ENST00000585847 PZPP20742 1482 aa18.77■□□□□ 0.59
VMP1-202ENST00000585847 NUP155O75694 1391 aa18.76■□□□□ 0.59
VMP1-202ENST00000585847 ZMYM3Q14202 1370 aa18.76■□□□□ 0.59
VMP1-202ENST00000585847 WASHC2CQ9Y4E1 1318 aa18.75■□□□□ 0.59
VMP1-202ENST00000585847 TET3O43151 1660 aa18.75■□□□□ 0.59
VMP1-202ENST00000585847 KANK1Q14678 1352 aa18.73■□□□□ 0.59
VMP1-202ENST00000585847 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
VMP1-202ENST00000585847 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
VMP1-202ENST00000585847 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
VMP1-202ENST00000585847 NPATQ14207 1427 aa18.72■□□□□ 0.59
VMP1-202ENST00000585847 ARHGAP31Q2M1Z3 1444 aa18.72■□□□□ 0.59
VMP1-202ENST00000585847 E9PCH4 1651 aa18.72■□□□□ 0.59
VMP1-202ENST00000585847 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
VMP1-202ENST00000585847 STRCQ7RTU9 1775 aa18.71■□□□□ 0.59
VMP1-202ENST00000585847 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
VMP1-202ENST00000585847 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
VMP1-202ENST00000585847 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
VMP1-202ENST00000585847 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
VMP1-202ENST00000585847 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
VMP1-202ENST00000585847 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
VMP1-202ENST00000585847 NOS1P29475 1434 aa18.65■□□□□ 0.58
VMP1-202ENST00000585847 RPRD2Q5VT52 1461 aaKnown RBP18.64■□□□□ 0.57
VMP1-202ENST00000585847 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
VMP1-202ENST00000585847 PTPRTO14522 1441 aa18.63■□□□□ 0.57
VMP1-202ENST00000585847 SYNMO15061 1565 aa18.63■□□□□ 0.57
VMP1-202ENST00000585847 PKD2Q13563 968 aa18.62■□□□□ 0.57
VMP1-202ENST00000585847 DISP3Q9P2K9 1392 aa18.62■□□□□ 0.57
VMP1-202ENST00000585847 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
VMP1-202ENST00000585847 FOXD1Q16676 465 aa18.6■□□□□ 0.57
VMP1-202ENST00000585847 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
VMP1-202ENST00000585847 TNRQ92752 1358 aa18.58■□□□□ 0.57
VMP1-202ENST00000585847 MYO3AQ8NEV4 1616 aa18.57■□□□□ 0.56
VMP1-202ENST00000585847 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
VMP1-202ENST00000585847 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
VMP1-202ENST00000585847 UGGT1Q9NYU2 1555 aa18.56■□□□□ 0.56
VMP1-202ENST00000585847 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
VMP1-202ENST00000585847 TRPM2O94759 1503 aa18.54■□□□□ 0.56
VMP1-202ENST00000585847 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
VMP1-202ENST00000585847 CLTCL1P53675 1640 aa18.52■□□□□ 0.56
VMP1-202ENST00000585847 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
VMP1-202ENST00000585847 LTBP4Q8N2S1 1624 aa18.52■□□□□ 0.55
VMP1-202ENST00000585847 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
VMP1-202ENST00000585847 IDI1Q13907 227 aa18.51■□□□□ 0.55
VMP1-202ENST00000585847 NLRP1Q9C000 1473 aa18.51■□□□□ 0.55
VMP1-202ENST00000585847 CEP170BQ9Y4F5 1589 aaPredicted RBP18.51■□□□□ 0.55
VMP1-202ENST00000585847 A2ML1A8K2U0 1454 aa18.5■□□□□ 0.55
VMP1-202ENST00000585847 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
VMP1-202ENST00000585847 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
VMP1-202ENST00000585847 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
VMP1-202ENST00000585847 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
VMP1-202ENST00000585847 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
VMP1-202ENST00000585847 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
VMP1-202ENST00000585847 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
VMP1-202ENST00000585847 SOCS7O14512 581 aa18.45■□□□□ 0.54
VMP1-202ENST00000585847 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
VMP1-202ENST00000585847 KIF1BO60333 1816 aa18.43■□□□□ 0.54
VMP1-202ENST00000585847 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
VMP1-202ENST00000585847 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
VMP1-202ENST00000585847 UBAP1LF5GYI3 381 aa18.4■□□□□ 0.54
VMP1-202ENST00000585847 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms