RNA–Protein interactions for RNA: ENST00000585760.5

GCDH-204, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-204ENST00000585760 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
GCDH-204ENST00000585760 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
GCDH-204ENST00000585760 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
GCDH-204ENST00000585760 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
GCDH-204ENST00000585760 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
GCDH-204ENST00000585760 GGT6Q6P531 493 aa22.52■■□□□ 1.2
GCDH-204ENST00000585760 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
GCDH-204ENST00000585760 CLTCQ00610 1675 aaKnown RBP22.51■■□□□ 1.19
GCDH-204ENST00000585760 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
GCDH-204ENST00000585760 MYO3AQ8NEV4 1616 aa22.5■■□□□ 1.19
GCDH-204ENST00000585760 ZNF142P52746 1687 aaPredicted RBP22.5■■□□□ 1.19
GCDH-204ENST00000585760 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
GCDH-204ENST00000585760 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
GCDH-204ENST00000585760 KIF3BO15066 747 aa22.46■■□□□ 1.19
GCDH-204ENST00000585760 MAST1Q9Y2H9 1570 aa22.45■■□□□ 1.18
GCDH-204ENST00000585760 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
GCDH-204ENST00000585760 A2ML1A8K2U0 1454 aa22.42■■□□□ 1.18
GCDH-204ENST00000585760 ABCC5O15440 1437 aa22.41■■□□□ 1.18
GCDH-204ENST00000585760 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
GCDH-204ENST00000585760 TOM1O60784 492 aa22.38■■□□□ 1.17
GCDH-204ENST00000585760 HSPA1LP34931 641 aa22.38■■□□□ 1.17
GCDH-204ENST00000585760 PIP4K2BP78356 416 aa22.38■■□□□ 1.17
GCDH-204ENST00000585760 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
GCDH-204ENST00000585760 DAPK1P53355 1430 aa22.37■■□□□ 1.17
GCDH-204ENST00000585760 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
GCDH-204ENST00000585760 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
GCDH-204ENST00000585760 CPS1P31327 1500 aa22.35■■□□□ 1.17
GCDH-204ENST00000585760 WASHC2CQ9Y4E1 1318 aa22.34■■□□□ 1.17
GCDH-204ENST00000585760 TNRQ92752 1358 aa22.34■■□□□ 1.17
GCDH-204ENST00000585760 RRP7BPQ9NSQ0 103 aa22.33■■□□□ 1.17
GCDH-204ENST00000585760 DUOX2Q9NRD8 1548 aa22.32■■□□□ 1.16
GCDH-204ENST00000585760 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
GCDH-204ENST00000585760 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
GCDH-204ENST00000585760 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
GCDH-204ENST00000585760 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
GCDH-204ENST00000585760 CROCC2H7BZ55 1655 aa22.3■■□□□ 1.16
GCDH-204ENST00000585760 MED1Q15648 1581 aaPredicted RBP22.3■■□□□ 1.16
GCDH-204ENST00000585760 ANKLE2Q86XL3 938 aa22.3■■□□□ 1.16
GCDH-204ENST00000585760 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
GCDH-204ENST00000585760 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
GCDH-204ENST00000585760 KDM5DQ9BY66 1539 aa22.29■■□□□ 1.16
GCDH-204ENST00000585760 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
GCDH-204ENST00000585760 PZPP20742 1482 aa22.28■■□□□ 1.16
GCDH-204ENST00000585760 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
GCDH-204ENST00000585760 POLR1AO95602 1720 aaPredicted RBP22.27■■□□□ 1.16
GCDH-204ENST00000585760 THEMISQ8N1K5 641 aaPredicted RBP22.27■■□□□ 1.16
GCDH-204ENST00000585760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.26■■□□□ 1.15
GCDH-204ENST00000585760 RNF17Q9BXT8 1623 aaKnown RBP22.26■■□□□ 1.15
GCDH-204ENST00000585760 ERBINQ96RT1 1412 aa22.25■■□□□ 1.15
GCDH-204ENST00000585760 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
GCDH-204ENST00000585760 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
GCDH-204ENST00000585760 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
GCDH-204ENST00000585760 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
GCDH-204ENST00000585760 NPHP4O75161 1426 aaPredicted RBP22.21■■□□□ 1.15
GCDH-204ENST00000585760 MED14O60244 1454 aa22.2■■□□□ 1.14
GCDH-204ENST00000585760 ABCC3O15438 1527 aa22.2■■□□□ 1.14
GCDH-204ENST00000585760 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
GCDH-204ENST00000585760 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
GCDH-204ENST00000585760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
GCDH-204ENST00000585760 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
GCDH-204ENST00000585760 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
GCDH-204ENST00000585760 KANK1Q14678 1352 aa22.14■■□□□ 1.14
GCDH-204ENST00000585760 ALKQ9UM73 1620 aa22.14■■□□□ 1.14
GCDH-204ENST00000585760 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
GCDH-204ENST00000585760 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
GCDH-204ENST00000585760 ITGAEP38570 1179 aa22.11■■□□□ 1.13
GCDH-204ENST00000585760 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
GCDH-204ENST00000585760 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
GCDH-204ENST00000585760 IQGAP1P46940 1657 aa22.1■■□□□ 1.13
GCDH-204ENST00000585760 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
GCDH-204ENST00000585760 CEP152O94986 1710 aa22.09■■□□□ 1.13
GCDH-204ENST00000585760 ARHGAP31Q2M1Z3 1444 aa22.09■■□□□ 1.13
GCDH-204ENST00000585760 ERVK-7P63135 1459 aa22.07■■□□□ 1.12
GCDH-204ENST00000585760 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
GCDH-204ENST00000585760 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
GCDH-204ENST00000585760 SYNMO15061 1565 aa22.04■■□□□ 1.12
GCDH-204ENST00000585760 STRCP1A6NGW2 1772 aa22.02■■□□□ 1.12
GCDH-204ENST00000585760 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
GCDH-204ENST00000585760 SCAF11Q99590 1463 aaKnown RBP21.98■■□□□ 1.11
GCDH-204ENST00000585760 LTKP29376 864 aa21.96■■□□□ 1.11
GCDH-204ENST00000585760 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
GCDH-204ENST00000585760 RGS17Q9UGC6 210 aaPredicted RBP21.96■■□□□ 1.11
GCDH-204ENST00000585760 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
GCDH-204ENST00000585760 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
GCDH-204ENST00000585760 UNC13BO14795 1591 aa21.93■■□□□ 1.1
GCDH-204ENST00000585760 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
GCDH-204ENST00000585760 EID1Q9Y6B2 187 aa21.93■■□□□ 1.1
GCDH-204ENST00000585760 NOS1P29475 1434 aa21.92■■□□□ 1.1
GCDH-204ENST00000585760 IDI1Q13907 227 aa21.92■■□□□ 1.1
GCDH-204ENST00000585760 SLIT1O75093 1534 aa21.91■■□□□ 1.1
GCDH-204ENST00000585760 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
GCDH-204ENST00000585760 NUP155O75694 1391 aa21.91■■□□□ 1.1
GCDH-204ENST00000585760 SLC52A1Q9NWF4 448 aa21.9■■□□□ 1.1
GCDH-204ENST00000585760 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
GCDH-204ENST00000585760 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.1
GCDH-204ENST00000585760 TET3O43151 1660 aa21.88■■□□□ 1.09
GCDH-204ENST00000585760 NAIPQ13075 1403 aa21.86■■□□□ 1.09
GCDH-204ENST00000585760 PIK3C2BO00750 1634 aa21.85■■□□□ 1.09
GCDH-204ENST00000585760 IQGAP3Q86VI3 1631 aa21.85■■□□□ 1.09
GCDH-204ENST00000585760 TMEM2Q9UHN6 1383 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms