RNA–Protein interactions for RNA: ENST00000585635.5

TPGS2-203, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3

Gene TPGS2, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-203ENST00000585635 TCOF1Q13428 1488 aaKnown RBP40.1■■■■■ 4.01
TPGS2-203ENST00000585635 DAPK1P53355 1430 aa40.09■■■■■ 4.01
TPGS2-203ENST00000585635 RRP7BPQ9NSQ0 103 aa40.09■■■■■ 4.01
TPGS2-203ENST00000585635 CROCC2H7BZ55 1655 aa40.08■■■■■ 4.01
TPGS2-203ENST00000585635 DMRT2Q9Y5R5 561 aa40.07■■■■■ 4.01
TPGS2-203ENST00000585635 CAMSAP1Q5T5Y3 1602 aa40.06■■■■■ 4
TPGS2-203ENST00000585635 SHANK2Q9UPX8 1470 aa40.06■■■■■ 4
TPGS2-203ENST00000585635 CHIC2Q9UKJ5 165 aa40.05■■■■■ 4
TPGS2-203ENST00000585635 KIF15Q9NS87 1388 aa40.05■■■■■ 4
TPGS2-203ENST00000585635 NCOA1Q15788 1441 aa40.05■■■■■ 4
TPGS2-203ENST00000585635 DNMT1P26358 1616 aaKnown RBP40.04■■■■■ 4
TPGS2-203ENST00000585635 RNF17Q9BXT8 1623 aaKnown RBP40.03■■■■■ 4
TPGS2-203ENST00000585635 CEP170BQ9Y4F5 1589 aaPredicted RBP40.03■■■■■ 4
TPGS2-203ENST00000585635 DUOX2Q9NRD8 1548 aa40.03■■■■■ 4
TPGS2-203ENST00000585635 FBXO41Q8TF61 875 aa40.03■■■■■ 4
TPGS2-203ENST00000585635 FAM135AQ9P2D6 1515 aa40.01■■■■■ 4
TPGS2-203ENST00000585635 PZPP20742 1482 aa40.01■■■■■ 4
TPGS2-203ENST00000585635 FAM50AQ14320 339 aaKnown RBP40.01■■■■■ 4
TPGS2-203ENST00000585635 EIF2AK4Q9P2K8 1649 aaKnown RBP40■■■■□ 3.99
TPGS2-203ENST00000585635 ZNF142P52746 1687 aaPredicted RBP39.99■■■■□ 3.99
TPGS2-203ENST00000585635 NCKAP5LQ9HCH0 1330 aa39.99■■■■□ 3.99
TPGS2-203ENST00000585635 TNRQ92752 1358 aa39.98■■■■□ 3.99
TPGS2-203ENST00000585635 ABCC3O15438 1527 aa39.96■■■■□ 3.99
TPGS2-203ENST00000585635 MROH1Q8NDA8 1641 aa39.96■■■■□ 3.99
TPGS2-203ENST00000585635 PPARGC1BQ86YN6 1023 aaKnown RBP39.96■■■■□ 3.99
TPGS2-203ENST00000585635 CERKQ8TCT0 537 aa39.96■■■■□ 3.99
TPGS2-203ENST00000585635 PTPRTO14522 1441 aa39.95■■■■□ 3.99
TPGS2-203ENST00000585635 A2ML1A8K2U0 1454 aa39.92■■■■□ 3.98
TPGS2-203ENST00000585635 ERBINQ96RT1 1412 aa39.89■■■■□ 3.98
TPGS2-203ENST00000585635 ANKRD30AQ9BXX3 1397 aa39.88■■■■□ 3.97
TPGS2-203ENST00000585635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.88■■■■□ 3.974e-8■□□□□ 8.6
TPGS2-203ENST00000585635 ZC3H13Q5T200 1668 aaKnown RBP39.86■■■■□ 3.97
TPGS2-203ENST00000585635 CEP152O94986 1710 aa39.86■■■■□ 3.97
TPGS2-203ENST00000585635 PLA2R1Q13018 1463 aa39.84■■■■□ 3.97
TPGS2-203ENST00000585635 PKD2Q13563 968 aa39.79■■■■□ 3.96
TPGS2-203ENST00000585635 PRDM15P57071 1507 aaPredicted RBP39.79■■■■□ 3.96
TPGS2-203ENST00000585635 ERVK-7P63135 1459 aa39.75■■■■□ 3.95
TPGS2-203ENST00000585635 ADGRL2O95490 1459 aa39.74■■■■□ 3.95
TPGS2-203ENST00000585635 NLRP1Q9C000 1473 aa39.74■■■■□ 3.95
TPGS2-203ENST00000585635 SPATA31D1Q6ZQQ2 1576 aa39.73■■■■□ 3.95
TPGS2-203ENST00000585635 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.72■■■■□ 3.95
TPGS2-203ENST00000585635 DEPDC5O75140 1603 aa39.71■■■■□ 3.95
TPGS2-203ENST00000585635 UGGT1Q9NYU2 1555 aa39.7■■■■□ 3.95
TPGS2-203ENST00000585635 LTBP4Q8N2S1 1624 aa39.69■■■■□ 3.94
TPGS2-203ENST00000585635 KANK1Q14678 1352 aa39.69■■■■□ 3.94
TPGS2-203ENST00000585635 CFAP65Q6ZU64 1925 aaKnown RBP39.69■■■■□ 3.94
TPGS2-203ENST00000585635 ZNF335Q9H4Z2 1342 aaPredicted RBP39.68■■■■□ 3.94
TPGS2-203ENST00000585635 THEMISQ8N1K5 641 aaPredicted RBP39.66■■■■□ 3.94
TPGS2-203ENST00000585635 ITGAEP38570 1179 aa39.63■■■■□ 3.93
TPGS2-203ENST00000585635 ARHGAP31Q2M1Z3 1444 aa39.62■■■■□ 3.93
TPGS2-203ENST00000585635 ANKRD50Q9ULJ7 1429 aa39.61■■■■□ 3.93
TPGS2-203ENST00000585635 NEURL4Q96JN8 1562 aa39.6■■■■□ 3.93
TPGS2-203ENST00000585635 ANKLE2Q86XL3 938 aa39.6■■■■□ 3.93
TPGS2-203ENST00000585635 POLR1AO95602 1720 aaPredicted RBP39.6■■■■□ 3.93
TPGS2-203ENST00000585635 VWDEQ8N2E2 1590 aa39.57■■■■□ 3.92
TPGS2-203ENST00000585635 LMTK2Q8IWU2 1503 aa39.54■■■■□ 3.92
TPGS2-203ENST00000585635 UBR1Q8IWV7 1749 aa39.48■■■■□ 3.91
TPGS2-203ENST00000585635 NPHP4O75161 1426 aaPredicted RBP39.47■■■■□ 3.91
TPGS2-203ENST00000585635 EFCAB6Q5THR3 1501 aa39.45■■■■□ 3.91
TPGS2-203ENST00000585635 ROCK1Q13464 1354 aa39.45■■■■□ 3.91
TPGS2-203ENST00000585635 PIK3C2BO00750 1634 aa39.41■■■■□ 3.9
TPGS2-203ENST00000585635 MED14O60244 1454 aa39.41■■■■□ 3.9
TPGS2-203ENST00000585635 SYNMO15061 1565 aa39.39■■■■□ 3.9
TPGS2-203ENST00000585635 IDI1Q13907 227 aa39.38■■■■□ 3.89
TPGS2-203ENST00000585635 STAG3Q9UJ98 1225 aa39.38■■■■□ 3.89
TPGS2-203ENST00000585635 IQSEC2Q5JU85 1478 aa39.37■■■■□ 3.89
TPGS2-203ENST00000585635 IQGAP1P46940 1657 aa39.36■■■■□ 3.89
TPGS2-203ENST00000585635 LTKP29376 864 aa39.36■■■■□ 3.89
TPGS2-203ENST00000585635 NOS1P29475 1434 aa39.35■■■■□ 3.89
TPGS2-203ENST00000585635 UNC13BO14795 1591 aa39.34■■■■□ 3.89
TPGS2-203ENST00000585635 TXNDC2Q86VQ3 553 aa39.33■■■■□ 3.89
TPGS2-203ENST00000585635 SCAF11Q99590 1463 aaKnown RBP39.32■■■■□ 3.89
TPGS2-203ENST00000585635 ARHGAP23Q9P227 1491 aa39.31■■■■□ 3.88
TPGS2-203ENST00000585635 SLIT1O75093 1534 aa39.3■■■■□ 3.88
TPGS2-203ENST00000585635 RRBP1Q9P2E9 1410 aaKnown RBP39.3■■■■□ 3.88
TPGS2-203ENST00000585635 TET3O43151 1660 aa39.29■■■■□ 3.88
TPGS2-203ENST00000585635 UBAP1LF5GYI3 381 aa39.28■■■■□ 3.88
TPGS2-203ENST00000585635 TMEM2Q9UHN6 1383 aa39.26■■■■□ 3.88
TPGS2-203ENST00000585635 EID1Q9Y6B2 187 aa39.25■■■■□ 3.87
TPGS2-203ENST00000585635 RPRD2Q5VT52 1461 aaKnown RBP39.24■■■■□ 3.87
TPGS2-203ENST00000585635 CPS1P31327 1500 aa39.24■■■■□ 3.87
TPGS2-203ENST00000585635 NUP155O75694 1391 aa39.23■■■■□ 3.87
TPGS2-203ENST00000585635 SLC52A1Q9NWF4 448 aa39.21■■■■□ 3.87
TPGS2-203ENST00000585635 GCC2Q8IWJ2 1684 aa39.21■■■■□ 3.87
TPGS2-203ENST00000585635 ADGRB3O60242 1522 aa39.19■■■■□ 3.86
TPGS2-203ENST00000585635 IQGAP3Q86VI3 1631 aa39.18■■■■□ 3.86
TPGS2-203ENST00000585635 E9PCH4 1651 aa39.17■■■■□ 3.86
TPGS2-203ENST00000585635 KDM5AP29375 1690 aaKnown RBP39.15■■■■□ 3.86
TPGS2-203ENST00000585635 STRCP1A6NGW2 1772 aa39.15■■■■□ 3.86
TPGS2-203ENST00000585635 SENP3Q9H4L4 574 aaPredicted RBP39.14■■■■□ 3.86
TPGS2-203ENST00000585635 CHGAP10645 457 aaKnown RBP39.1■■■■□ 3.85
TPGS2-203ENST00000585635 SCAF1Q9H7N4 1312 aaKnown RBP39.08■■■■□ 3.85
TPGS2-203ENST00000585635 PIP4K2BP78356 416 aa39.06■■■■□ 3.84
TPGS2-203ENST00000585635 NAIPQ13075 1403 aa39.06■■■■□ 3.84
TPGS2-203ENST00000585635 SLC26A8Q96RN1 970 aa39.05■■■■□ 3.84
TPGS2-203ENST00000585635 LRRC7Q96NW7 1537 aa39.04■■■■□ 3.84
TPGS2-203ENST00000585635 MYO5BQ9ULV0 1848 aa39.04■■■■□ 3.84
TPGS2-203ENST00000585635 BCANQ96GW7 911 aa39.02■■■■□ 3.84
TPGS2-203ENST00000585635 TMEM131LA2VDJ0 1609 aa39.01■■■■□ 3.84
TPGS2-203ENST00000585635 TOM1O60784 492 aa38.99■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms