RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.26
ATG4D-202ENST00000585437 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
ATG4D-202ENST00000585437 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
ATG4D-202ENST00000585437 ERBINQ96RT1 1412 aa13.45□□□□□ -0.26
ATG4D-202ENST00000585437 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
ATG4D-202ENST00000585437 ABCC3O15438 1527 aa13.44□□□□□ -0.26
ATG4D-202ENST00000585437 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
ATG4D-202ENST00000585437 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
ATG4D-202ENST00000585437 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
ATG4D-202ENST00000585437 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
ATG4D-202ENST00000585437 PZPP20742 1482 aa13.42□□□□□ -0.26
ATG4D-202ENST00000585437 VWDEQ8N2E2 1590 aa13.41□□□□□ -0.26
ATG4D-202ENST00000585437 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
ATG4D-202ENST00000585437 NCOA1Q15788 1441 aa13.41□□□□□ -0.26
ATG4D-202ENST00000585437 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
ATG4D-202ENST00000585437 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
ATG4D-202ENST00000585437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATG4D-202ENST00000585437 KIF3BO15066 747 aa13.39□□□□□ -0.27
ATG4D-202ENST00000585437 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
ATG4D-202ENST00000585437 UNC13BO14795 1591 aa13.39□□□□□ -0.27
ATG4D-202ENST00000585437 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
ATG4D-202ENST00000585437 GGT6Q6P531 493 aa13.38□□□□□ -0.27
ATG4D-202ENST00000585437 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
ATG4D-202ENST00000585437 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
ATG4D-202ENST00000585437 LMTK2Q8IWU2 1503 aa13.37□□□□□ -0.27
ATG4D-202ENST00000585437 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-202ENST00000585437 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
ATG4D-202ENST00000585437 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
ATG4D-202ENST00000585437 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
ATG4D-202ENST00000585437 TET3O43151 1660 aa13.34□□□□□ -0.27
ATG4D-202ENST00000585437 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
ATG4D-202ENST00000585437 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
ATG4D-202ENST00000585437 ARHGAP31Q2M1Z3 1444 aa13.33□□□□□ -0.28
ATG4D-202ENST00000585437 HSPA2P54652 639 aa13.33□□□□□ -0.28
ATG4D-202ENST00000585437 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
ATG4D-202ENST00000585437 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
ATG4D-202ENST00000585437 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
ATG4D-202ENST00000585437 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
ATG4D-202ENST00000585437 KDM5AP29375 1690 aaKnown RBP13.32□□□□□ -0.28
ATG4D-202ENST00000585437 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
ATG4D-202ENST00000585437 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
ATG4D-202ENST00000585437 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
ATG4D-202ENST00000585437 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
ATG4D-202ENST00000585437 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
ATG4D-202ENST00000585437 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
ATG4D-202ENST00000585437 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
ATG4D-202ENST00000585437 TNRQ92752 1358 aa13.29□□□□□ -0.28
ATG4D-202ENST00000585437 SYNMO15061 1565 aa13.28□□□□□ -0.28
ATG4D-202ENST00000585437 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
ATG4D-202ENST00000585437 E9PCH4 1651 aa13.28□□□□□ -0.28
ATG4D-202ENST00000585437 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
ATG4D-202ENST00000585437 PTPRTO14522 1441 aa13.27□□□□□ -0.29
ATG4D-202ENST00000585437 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.29
ATG4D-202ENST00000585437 PIK3C2BO00750 1634 aa13.27□□□□□ -0.29
ATG4D-202ENST00000585437 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
ATG4D-202ENST00000585437 KANK1Q14678 1352 aa13.25□□□□□ -0.29
ATG4D-202ENST00000585437 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
ATG4D-202ENST00000585437 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
ATG4D-202ENST00000585437 NOS1P29475 1434 aa13.22□□□□□ -0.29
ATG4D-202ENST00000585437 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
ATG4D-202ENST00000585437 IQGAP1P46940 1657 aa13.21□□□□□ -0.29
ATG4D-202ENST00000585437 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
ATG4D-202ENST00000585437 SLIT1O75093 1534 aa13.21□□□□□ -0.29
ATG4D-202ENST00000585437 NAIPQ13075 1403 aa13.21□□□□□ -0.3
ATG4D-202ENST00000585437 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
ATG4D-202ENST00000585437 MED14O60244 1454 aa13.2□□□□□ -0.3
ATG4D-202ENST00000585437 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
ATG4D-202ENST00000585437 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
ATG4D-202ENST00000585437 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
ATG4D-202ENST00000585437 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
ATG4D-202ENST00000585437 PKD2Q13563 968 aa13.17□□□□□ -0.3
ATG4D-202ENST00000585437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATG4D-202ENST00000585437 ITGAEP38570 1179 aa13.15□□□□□ -0.3
ATG4D-202ENST00000585437 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.31
ATG4D-202ENST00000585437 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
ATG4D-202ENST00000585437 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
ATG4D-202ENST00000585437 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
ATG4D-202ENST00000585437 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-202ENST00000585437 NUP155O75694 1391 aa13.11□□□□□ -0.31
ATG4D-202ENST00000585437 TRPM2O94759 1503 aa13.11□□□□□ -0.31
ATG4D-202ENST00000585437 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
ATG4D-202ENST00000585437 CLTCL1P53675 1640 aa13.1□□□□□ -0.31
ATG4D-202ENST00000585437 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
ATG4D-202ENST00000585437 KIF1BO60333 1816 aa13.1□□□□□ -0.31
ATG4D-202ENST00000585437 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
ATG4D-202ENST00000585437 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
ATG4D-202ENST00000585437 CPS1P31327 1500 aa13.08□□□□□ -0.31
ATG4D-202ENST00000585437 XIRP1Q702N8 1843 aaKnown RBP13.08□□□□□ -0.32
ATG4D-202ENST00000585437 IDI1Q13907 227 aa13.07□□□□□ -0.32
ATG4D-202ENST00000585437 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
ATG4D-202ENST00000585437 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
ATG4D-202ENST00000585437 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
ATG4D-202ENST00000585437 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
ATG4D-202ENST00000585437 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
ATG4D-202ENST00000585437 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-202ENST00000585437 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
ATG4D-202ENST00000585437 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
ATG4D-202ENST00000585437 LTKP29376 864 aa13.03□□□□□ -0.32
ATG4D-202ENST00000585437 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
ATG4D-202ENST00000585437 IFT172Q9UG01 1749 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms