RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
RAB11FIP4-210ENST00000585058 CUX2O14529 1486 aa16.47■□□□□ 0.23
RAB11FIP4-210ENST00000585058 PHF14O94880 888 aa16.47■□□□□ 0.23
RAB11FIP4-210ENST00000585058 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP4-210ENST00000585058 EIF3AQ14152 1382 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP4-210ENST00000585058 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
RAB11FIP4-210ENST00000585058 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
RAB11FIP4-210ENST00000585058 CEP89Q96ST8 783 aa16.45■□□□□ 0.22
RAB11FIP4-210ENST00000585058 G3V3G9 751 aa16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 NUTM2DQ5VT03 806 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 MARCH6O60337 910 aa16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 LTV1Q96GA3 475 aaPredicted RBP16.44■□□□□ 0.22
RAB11FIP4-210ENST00000585058 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
RAB11FIP4-210ENST00000585058 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
RAB11FIP4-210ENST00000585058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.22
RAB11FIP4-210ENST00000585058 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
RAB11FIP4-210ENST00000585058 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
RAB11FIP4-210ENST00000585058 AMPHP49418 695 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 FOXD4L6Q3SYB3 417 aaPredicted RBP16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 FOXD4L3Q6VB84 417 aaPredicted RBP16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 H3BQV1 296 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
RAB11FIP4-210ENST00000585058 TPD52L1Q16890 204 aaPredicted RBP16.4■□□□□ 0.22
RAB11FIP4-210ENST00000585058 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
RAB11FIP4-210ENST00000585058 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
RAB11FIP4-210ENST00000585058 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
RAB11FIP4-210ENST00000585058 CCAR2Q8N163 923 aaKnown RBP16.39■□□□□ 0.21
RAB11FIP4-210ENST00000585058 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
RAB11FIP4-210ENST00000585058 NUTM2FA1L443 756 aa16.38■□□□□ 0.21
RAB11FIP4-210ENST00000585058 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
RAB11FIP4-210ENST00000585058 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
RAB11FIP4-210ENST00000585058 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
RAB11FIP4-210ENST00000585058 L3MBTL2Q969R5 705 aa16.38■□□□□ 0.21
RAB11FIP4-210ENST00000585058 KIF3BO15066 747 aa16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
RAB11FIP4-210ENST00000585058 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
RAB11FIP4-210ENST00000585058 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
RAB11FIP4-210ENST00000585058 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
RAB11FIP4-210ENST00000585058 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
RAB11FIP4-210ENST00000585058 BECN2A8MW95 431 aa16.35■□□□□ 0.21
RAB11FIP4-210ENST00000585058 PLIN1O60240 522 aa16.34■□□□□ 0.21
RAB11FIP4-210ENST00000585058 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
RAB11FIP4-210ENST00000585058 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
RAB11FIP4-210ENST00000585058 WWC1Q8IX03 1113 aa16.33■□□□□ 0.2
RAB11FIP4-210ENST00000585058 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.2
RAB11FIP4-210ENST00000585058 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 TRAK1Q9UPV9 953 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 PDE4AP27815 886 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 HNRNPMP52272 730 aaKnown RBP eCLIP16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 EID1Q9Y6B2 187 aa16.32■□□□□ 0.2
RAB11FIP4-210ENST00000585058 PHLDB1Q86UU1 1377 aa16.31■□□□□ 0.2
RAB11FIP4-210ENST00000585058 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
RAB11FIP4-210ENST00000585058 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
RAB11FIP4-210ENST00000585058 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
RAB11FIP4-210ENST00000585058 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
RAB11FIP4-210ENST00000585058 TPM1P09493 284 aa16.3■□□□□ 0.2
RAB11FIP4-210ENST00000585058 GSE1Q14687 1217 aa16.29■□□□□ 0.2
RAB11FIP4-210ENST00000585058 TPM2P07951 284 aa16.29■□□□□ 0.2
RAB11FIP4-210ENST00000585058 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
RAB11FIP4-210ENST00000585058 PANK3Q9H999 370 aa16.29■□□□□ 0.2
RAB11FIP4-210ENST00000585058 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
RAB11FIP4-210ENST00000585058 WASHC2CQ9Y4E1 1318 aa16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 PATL2C9JE40 543 aaKnown RBP16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
RAB11FIP4-210ENST00000585058 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
RAB11FIP4-210ENST00000585058 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.2
RAB11FIP4-210ENST00000585058 COG6Q9Y2V7 657 aa16.27■□□□□ 0.19
RAB11FIP4-210ENST00000585058 CCDC70Q6NSX1 233 aa16.26■□□□□ 0.19
RAB11FIP4-210ENST00000585058 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 RAD21O60216 631 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 GPS2Q13227 327 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 PCMTD1Q96MG8 357 aaPredicted RBP16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
RAB11FIP4-210ENST00000585058 E9PSI1 815 aa16.24■□□□□ 0.19
RAB11FIP4-210ENST00000585058 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
RAB11FIP4-210ENST00000585058 VSIG10Q8N0Z9 540 aa16.23■□□□□ 0.19
RAB11FIP4-210ENST00000585058 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms