RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 KIF3BO15066 747 aa16.67■□□□□ 0.26
CASC3-210ENST00000584997 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
CASC3-210ENST00000584997 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
CASC3-210ENST00000584997 KDM5DQ9BY66 1539 aa16.66■□□□□ 0.26
CASC3-210ENST00000584997 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
CASC3-210ENST00000584997 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
CASC3-210ENST00000584997 TNRQ92752 1358 aa16.64■□□□□ 0.26
CASC3-210ENST00000584997 PZPP20742 1482 aa16.64■□□□□ 0.25
CASC3-210ENST00000584997 RSPH4AQ5TD94 716 aa16.63■□□□□ 0.25
CASC3-210ENST00000584997 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
CASC3-210ENST00000584997 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
CASC3-210ENST00000584997 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
CASC3-210ENST00000584997 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
CASC3-210ENST00000584997 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
CASC3-210ENST00000584997 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
CASC3-210ENST00000584997 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
CASC3-210ENST00000584997 CPS1P31327 1500 aa16.59■□□□□ 0.25
CASC3-210ENST00000584997 NLRP1Q9C000 1473 aa16.58■□□□□ 0.24
CASC3-210ENST00000584997 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
CASC3-210ENST00000584997 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
CASC3-210ENST00000584997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
CASC3-210ENST00000584997 ANKLE2Q86XL3 938 aa16.57■□□□□ 0.24
CASC3-210ENST00000584997 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
CASC3-210ENST00000584997 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
CASC3-210ENST00000584997 TOM1O60784 492 aa16.55■□□□□ 0.24
CASC3-210ENST00000584997 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
CASC3-210ENST00000584997 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
CASC3-210ENST00000584997 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
CASC3-210ENST00000584997 DEPDC5O75140 1603 aa16.53■□□□□ 0.24
CASC3-210ENST00000584997 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
CASC3-210ENST00000584997 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
CASC3-210ENST00000584997 MAST1Q9Y2H9 1570 aa16.52■□□□□ 0.24
CASC3-210ENST00000584997 IQGAP1P46940 1657 aa16.52■□□□□ 0.23
CASC3-210ENST00000584997 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
CASC3-210ENST00000584997 ABCC3O15438 1527 aa16.51■□□□□ 0.23
CASC3-210ENST00000584997 MED14O60244 1454 aa16.51■□□□□ 0.23
CASC3-210ENST00000584997 HSPA1LP34931 641 aa16.51■□□□□ 0.23
CASC3-210ENST00000584997 EIF2AK4Q9P2K8 1649 aaKnown RBP16.51■□□□□ 0.23
CASC3-210ENST00000584997 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
CASC3-210ENST00000584997 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
CASC3-210ENST00000584997 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
CASC3-210ENST00000584997 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
CASC3-210ENST00000584997 CEP152O94986 1710 aa16.48■□□□□ 0.23
CASC3-210ENST00000584997 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
CASC3-210ENST00000584997 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
CASC3-210ENST00000584997 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
CASC3-210ENST00000584997 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
CASC3-210ENST00000584997 SYNMO15061 1565 aa16.43■□□□□ 0.22
CASC3-210ENST00000584997 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
CASC3-210ENST00000584997 KANK4Q5T7N3 995 aaPredicted RBP16.43■□□□□ 0.22
CASC3-210ENST00000584997 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
CASC3-210ENST00000584997 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
CASC3-210ENST00000584997 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
CASC3-210ENST00000584997 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
CASC3-210ENST00000584997 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
CASC3-210ENST00000584997 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
CASC3-210ENST00000584997 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
CASC3-210ENST00000584997 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
CASC3-210ENST00000584997 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
CASC3-210ENST00000584997 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
CASC3-210ENST00000584997 ERBINQ96RT1 1412 aa16.37■□□□□ 0.21
CASC3-210ENST00000584997 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
CASC3-210ENST00000584997 SLIT1O75093 1534 aa16.36■□□□□ 0.21
CASC3-210ENST00000584997 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
CASC3-210ENST00000584997 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
CASC3-210ENST00000584997 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
CASC3-210ENST00000584997 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
CASC3-210ENST00000584997 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
CASC3-210ENST00000584997 LTKP29376 864 aa16.34■□□□□ 0.21
CASC3-210ENST00000584997 APLP2Q06481 763 aa16.34■□□□□ 0.21
CASC3-210ENST00000584997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■■□□ 19
CASC3-210ENST00000584997 KANK1Q14678 1352 aa16.34■□□□□ 0.21
CASC3-210ENST00000584997 ABCC5O15440 1437 aa16.34■□□□□ 0.21
CASC3-210ENST00000584997 PIK3C2BO00750 1634 aa16.34■□□□□ 0.21
CASC3-210ENST00000584997 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CASC3-210ENST00000584997 DAPK1P53355 1430 aa16.32■□□□□ 0.2
CASC3-210ENST00000584997 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
CASC3-210ENST00000584997 TMEM2Q9UHN6 1383 aa16.29■□□□□ 0.2
CASC3-210ENST00000584997 KDM5AP29375 1690 aaKnown RBP16.29■□□□□ 0.2
CASC3-210ENST00000584997 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
CASC3-210ENST00000584997 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
CASC3-210ENST00000584997 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
CASC3-210ENST00000584997 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
CASC3-210ENST00000584997 LMTK2Q8IWU2 1503 aa16.26■□□□□ 0.19
CASC3-210ENST00000584997 IDI1Q13907 227 aa16.24■□□□□ 0.19
CASC3-210ENST00000584997 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
CASC3-210ENST00000584997 ADGRB3O60242 1522 aa16.22■□□□□ 0.19
CASC3-210ENST00000584997 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
CASC3-210ENST00000584997 KCNA6P17658 529 aa16.21■□□□□ 0.19
CASC3-210ENST00000584997 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
CASC3-210ENST00000584997 NOS1P29475 1434 aa16.2■□□□□ 0.18
CASC3-210ENST00000584997 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
CASC3-210ENST00000584997 TET3O43151 1660 aa16.2■□□□□ 0.18
CASC3-210ENST00000584997 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
CASC3-210ENST00000584997 BCANQ96GW7 911 aa16.19■□□□□ 0.18
CASC3-210ENST00000584997 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
CASC3-210ENST00000584997 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
CASC3-210ENST00000584997 SLC52A1Q9NWF4 448 aa16.18■□□□□ 0.18
CASC3-210ENST00000584997 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
CASC3-210ENST00000584997 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms