RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 CNTLNQ9NXG0 1405 aa22.25■■□□□ 1.15
RIOK3-210ENST00000584960 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
RIOK3-210ENST00000584960 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
RIOK3-210ENST00000584960 NAIPQ13075 1403 aa22.23■■□□□ 1.15
RIOK3-210ENST00000584960 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
RIOK3-210ENST00000584960 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
RIOK3-210ENST00000584960 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
RIOK3-210ENST00000584960 KANK1Q14678 1352 aa22.2■■□□□ 1.14
RIOK3-210ENST00000584960 RIMS1Q86UR5 1692 aaKnown RBP22.2■■□□□ 1.14
RIOK3-210ENST00000584960 WASHC2CQ9Y4E1 1318 aa22.19■■□□□ 1.14
RIOK3-210ENST00000584960 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
RIOK3-210ENST00000584960 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
RIOK3-210ENST00000584960 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
RIOK3-210ENST00000584960 KDM5DQ9BY66 1539 aa22.17■■□□□ 1.14
RIOK3-210ENST00000584960 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
RIOK3-210ENST00000584960 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
RIOK3-210ENST00000584960 PTPRMP28827 1452 aa22.16■■□□□ 1.14
RIOK3-210ENST00000584960 CLTCQ00610 1675 aaKnown RBP22.16■■□□□ 1.14
RIOK3-210ENST00000584960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.142e-10■□□□□ 10.8
RIOK3-210ENST00000584960 ZMYM3Q14202 1370 aa22.13■■□□□ 1.13
RIOK3-210ENST00000584960 UNC13BO14795 1591 aa22.13■■□□□ 1.13
RIOK3-210ENST00000584960 SETD5Q9C0A6 1442 aa22.12■■□□□ 1.13
RIOK3-210ENST00000584960 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
RIOK3-210ENST00000584960 SETD1BQ9UPS6 1966 aaKnown RBP22.11■■□□□ 1.13
RIOK3-210ENST00000584960 ABCC3O15438 1527 aa22.11■■□□□ 1.13
RIOK3-210ENST00000584960 LMTK2Q8IWU2 1503 aa22.1■■□□□ 1.13
RIOK3-210ENST00000584960 HRCP23327 699 aa22.09■■□□□ 1.13
RIOK3-210ENST00000584960 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
RIOK3-210ENST00000584960 C3P01024 1663 aa22.09■■□□□ 1.13
RIOK3-210ENST00000584960 CEP152O94986 1710 aa22.09■■□□□ 1.13
RIOK3-210ENST00000584960 NUP155O75694 1391 aa22.08■■□□□ 1.12
RIOK3-210ENST00000584960 ARHGAP31Q2M1Z3 1444 aa22.06■■□□□ 1.12
RIOK3-210ENST00000584960 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
RIOK3-210ENST00000584960 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
RIOK3-210ENST00000584960 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
RIOK3-210ENST00000584960 NPATQ14207 1427 aa22.04■■□□□ 1.12
RIOK3-210ENST00000584960 PZPP20742 1482 aa22.03■■□□□ 1.12
RIOK3-210ENST00000584960 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
RIOK3-210ENST00000584960 TET3O43151 1660 aa22.03■■□□□ 1.12
RIOK3-210ENST00000584960 RAB3GAP2Q9H2M9 1393 aa22■■□□□ 1.11
RIOK3-210ENST00000584960 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
RIOK3-210ENST00000584960 RPRD2Q5VT52 1461 aaKnown RBP22■■□□□ 1.11
RIOK3-210ENST00000584960 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
RIOK3-210ENST00000584960 EFCAB6Q5THR3 1501 aa21.99■■□□□ 1.11
RIOK3-210ENST00000584960 FBXO31Q5XUX0 539 aaPredicted RBP21.95■■□□□ 1.1
RIOK3-210ENST00000584960 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
RIOK3-210ENST00000584960 PREX1Q8TCU6 1659 aa21.94■■□□□ 1.1
RIOK3-210ENST00000584960 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
RIOK3-210ENST00000584960 ERVK-7P63135 1459 aa21.92■■□□□ 1.1
RIOK3-210ENST00000584960 TNRQ92752 1358 aa21.92■■□□□ 1.1
RIOK3-210ENST00000584960 E9PCH4 1651 aa21.91■■□□□ 1.1
RIOK3-210ENST00000584960 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
RIOK3-210ENST00000584960 NOS1P29475 1434 aa21.89■■□□□ 1.1
RIOK3-210ENST00000584960 UHRF1BP1Q6BDS2 1440 aa21.89■■□□□ 1.1
RIOK3-210ENST00000584960 PKD2Q13563 968 aa21.88■■□□□ 1.09
RIOK3-210ENST00000584960 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
RIOK3-210ENST00000584960 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
RIOK3-210ENST00000584960 MYO3AQ8NEV4 1616 aa21.84■■□□□ 1.09
RIOK3-210ENST00000584960 PTPRTO14522 1441 aa21.83■■□□□ 1.09
RIOK3-210ENST00000584960 SPHKAPQ2M3C7 1700 aa21.83■■□□□ 1.08
RIOK3-210ENST00000584960 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.08
RIOK3-210ENST00000584960 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
RIOK3-210ENST00000584960 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
RIOK3-210ENST00000584960 LMTK3Q96Q04 1460 aa21.81■■□□□ 1.08
RIOK3-210ENST00000584960 SYNMO15061 1565 aa21.81■■□□□ 1.08
RIOK3-210ENST00000584960 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
RIOK3-210ENST00000584960 IDI1Q13907 227 aa21.79■■□□□ 1.08
RIOK3-210ENST00000584960 THEMISQ8N1K5 641 aaPredicted RBP21.78■■□□□ 1.08
RIOK3-210ENST00000584960 KDM5AP29375 1690 aaKnown RBP21.78■■□□□ 1.08
RIOK3-210ENST00000584960 PIK3C2BO00750 1634 aa21.77■■□□□ 1.07
RIOK3-210ENST00000584960 TRPM2O94759 1503 aa21.76■■□□□ 1.07
RIOK3-210ENST00000584960 UGGT1Q9NYU2 1555 aa21.76■■□□□ 1.07
RIOK3-210ENST00000584960 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
RIOK3-210ENST00000584960 UBR1Q8IWV7 1749 aa21.73■■□□□ 1.07
RIOK3-210ENST00000584960 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
RIOK3-210ENST00000584960 FOXD1Q16676 465 aa21.72■■□□□ 1.07
RIOK3-210ENST00000584960 HSPA2P54652 639 aa21.7■■□□□ 1.06
RIOK3-210ENST00000584960 KIF1BO60333 1816 aa21.7■■□□□ 1.06
RIOK3-210ENST00000584960 ADGRB3O60242 1522 aa21.69■■□□□ 1.06
RIOK3-210ENST00000584960 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
RIOK3-210ENST00000584960 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
RIOK3-210ENST00000584960 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
RIOK3-210ENST00000584960 ANKRD30BQ9BXX2 1392 aa21.67■■□□□ 1.06
RIOK3-210ENST00000584960 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
RIOK3-210ENST00000584960 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
RIOK3-210ENST00000584960 ANKLE2Q86XL3 938 aa21.65■■□□□ 1.06
RIOK3-210ENST00000584960 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.06
RIOK3-210ENST00000584960 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
RIOK3-210ENST00000584960 SLIT1O75093 1534 aa21.64■■□□□ 1.05
RIOK3-210ENST00000584960 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
RIOK3-210ENST00000584960 ARHGAP23Q9P227 1491 aa21.63■■□□□ 1.05
RIOK3-210ENST00000584960 TMEM2Q9UHN6 1383 aa21.62■■□□□ 1.05
RIOK3-210ENST00000584960 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
RIOK3-210ENST00000584960 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.61■■□□□ 1.05
RIOK3-210ENST00000584960 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
RIOK3-210ENST00000584960 STRCQ7RTU9 1775 aa21.6■■□□□ 1.05
RIOK3-210ENST00000584960 POLR1AO95602 1720 aaPredicted RBP21.59■■□□□ 1.05
RIOK3-210ENST00000584960 RPGRIP1LQ68CZ1 1315 aa21.58■■□□□ 1.05
RIOK3-210ENST00000584960 TXNDC2Q86VQ3 553 aa21.58■■□□□ 1.05
RIOK3-210ENST00000584960 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms