RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
AC055811.3-201ENST00000584952 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
AC055811.3-201ENST00000584952 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
AC055811.3-201ENST00000584952 A2ML1A8K2U0 1454 aa21.3■■□□□ 1
AC055811.3-201ENST00000584952 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
AC055811.3-201ENST00000584952 ARHGEF5Q12774 1597 aa21.28■■□□□ 1
AC055811.3-201ENST00000584952 TNRQ92752 1358 aa21.27■■□□□ 1
AC055811.3-201ENST00000584952 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
AC055811.3-201ENST00000584952 KDM5DQ9BY66 1539 aa21.27■■□□□ 1
AC055811.3-201ENST00000584952 FAM135AQ9P2D6 1515 aa21.27■■□□□ 1
AC055811.3-201ENST00000584952 PZPP20742 1482 aa21.26■□□□□ 0.99
AC055811.3-201ENST00000584952 DNMT1P26358 1616 aaKnown RBP21.26■□□□□ 0.99
AC055811.3-201ENST00000584952 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
AC055811.3-201ENST00000584952 MAP3K1Q13233 1512 aa21.22■□□□□ 0.99
AC055811.3-201ENST00000584952 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
AC055811.3-201ENST00000584952 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
AC055811.3-201ENST00000584952 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
AC055811.3-201ENST00000584952 ANKLE2Q86XL3 938 aa21.18■□□□□ 0.98
AC055811.3-201ENST00000584952 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
AC055811.3-201ENST00000584952 MAST1Q9Y2H9 1570 aa21.18■□□□□ 0.98
AC055811.3-201ENST00000584952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.17■□□□□ 0.98
AC055811.3-201ENST00000584952 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
AC055811.3-201ENST00000584952 ILDR2Q71H61 639 aa21.15■□□□□ 0.98
AC055811.3-201ENST00000584952 RNF17Q9BXT8 1623 aaKnown RBP21.14■□□□□ 0.97
AC055811.3-201ENST00000584952 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
AC055811.3-201ENST00000584952 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
AC055811.3-201ENST00000584952 ABCC3O15438 1527 aa21.13■□□□□ 0.97
AC055811.3-201ENST00000584952 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
AC055811.3-201ENST00000584952 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
AC055811.3-201ENST00000584952 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
AC055811.3-201ENST00000584952 APLP2Q06481 763 aa21.09■□□□□ 0.97
AC055811.3-201ENST00000584952 CPS1P31327 1500 aa21.09■□□□□ 0.97
AC055811.3-201ENST00000584952 ZC3H13Q5T200 1668 aaKnown RBP21.09■□□□□ 0.97
AC055811.3-201ENST00000584952 MED14O60244 1454 aa21.08■□□□□ 0.97
AC055811.3-201ENST00000584952 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.97
AC055811.3-201ENST00000584952 SPATA31D1Q6ZQQ2 1576 aa21.08■□□□□ 0.97
AC055811.3-201ENST00000584952 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.96
AC055811.3-201ENST00000584952 MROH1Q8NDA8 1641 aa21.07■□□□□ 0.96
AC055811.3-201ENST00000584952 ERVK-7P63135 1459 aa21.07■□□□□ 0.96
AC055811.3-201ENST00000584952 ABCC5O15440 1437 aa21.05■□□□□ 0.96
AC055811.3-201ENST00000584952 DEPDC5O75140 1603 aa21.05■□□□□ 0.96
AC055811.3-201ENST00000584952 TOM1O60784 492 aa21.05■□□□□ 0.96
AC055811.3-201ENST00000584952 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
AC055811.3-201ENST00000584952 KIF15Q9NS87 1388 aa21.05■□□□□ 0.96
AC055811.3-201ENST00000584952 SOCS7O14512 581 aa21.04■□□□□ 0.96
AC055811.3-201ENST00000584952 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
AC055811.3-201ENST00000584952 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
AC055811.3-201ENST00000584952 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
AC055811.3-201ENST00000584952 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
AC055811.3-201ENST00000584952 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
AC055811.3-201ENST00000584952 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
AC055811.3-201ENST00000584952 CEP152O94986 1710 aa21■□□□□ 0.95
AC055811.3-201ENST00000584952 DAPK1P53355 1430 aa20.99■□□□□ 0.95
AC055811.3-201ENST00000584952 HSPA1LP34931 641 aa20.99■□□□□ 0.95
AC055811.3-201ENST00000584952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.95
AC055811.3-201ENST00000584952 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
AC055811.3-201ENST00000584952 PRDM15P57071 1507 aaPredicted RBP20.98■□□□□ 0.95
AC055811.3-201ENST00000584952 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
AC055811.3-201ENST00000584952 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
AC055811.3-201ENST00000584952 CHIC2Q9UKJ5 165 aa20.95■□□□□ 0.94
AC055811.3-201ENST00000584952 LTKP29376 864 aa20.94■□□□□ 0.94
AC055811.3-201ENST00000584952 TXNDC2Q86VQ3 553 aa20.94■□□□□ 0.94
AC055811.3-201ENST00000584952 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
AC055811.3-201ENST00000584952 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
AC055811.3-201ENST00000584952 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
AC055811.3-201ENST00000584952 KANK1Q14678 1352 aa20.93■□□□□ 0.94
AC055811.3-201ENST00000584952 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
AC055811.3-201ENST00000584952 ARHGAP23Q9P227 1491 aa20.92■□□□□ 0.94
AC055811.3-201ENST00000584952 SLIT1O75093 1534 aa20.91■□□□□ 0.94
AC055811.3-201ENST00000584952 LRRC7Q96NW7 1537 aa20.91■□□□□ 0.94
AC055811.3-201ENST00000584952 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
AC055811.3-201ENST00000584952 ALKQ9UM73 1620 aa20.89■□□□□ 0.94
AC055811.3-201ENST00000584952 STRCP1A6NGW2 1772 aa20.89■□□□□ 0.93
AC055811.3-201ENST00000584952 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
AC055811.3-201ENST00000584952 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
AC055811.3-201ENST00000584952 IDI1Q13907 227 aa20.87■□□□□ 0.93
AC055811.3-201ENST00000584952 LMTK2Q8IWU2 1503 aa20.87■□□□□ 0.93
AC055811.3-201ENST00000584952 SYNMO15061 1565 aa20.85■□□□□ 0.93
AC055811.3-201ENST00000584952 PIK3C2BO00750 1634 aa20.85■□□□□ 0.93
AC055811.3-201ENST00000584952 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
AC055811.3-201ENST00000584952 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
AC055811.3-201ENST00000584952 MED1Q15648 1581 aaPredicted RBP20.81■□□□□ 0.92
AC055811.3-201ENST00000584952 EFCAB6Q5THR3 1501 aa20.81■□□□□ 0.92
AC055811.3-201ENST00000584952 NOS1P29475 1434 aa20.8■□□□□ 0.92
AC055811.3-201ENST00000584952 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
AC055811.3-201ENST00000584952 SLC52A1Q9NWF4 448 aa20.79■□□□□ 0.92
AC055811.3-201ENST00000584952 KDM5AP29375 1690 aaKnown RBP20.79■□□□□ 0.92
AC055811.3-201ENST00000584952 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
AC055811.3-201ENST00000584952 SLC26A8Q96RN1 970 aa20.76■□□□□ 0.91
AC055811.3-201ENST00000584952 KCNA6P17658 529 aa20.75■□□□□ 0.91
AC055811.3-201ENST00000584952 TET3O43151 1660 aa20.73■□□□□ 0.91
AC055811.3-201ENST00000584952 RPRD2Q5VT52 1461 aaKnown RBP20.73■□□□□ 0.91
AC055811.3-201ENST00000584952 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
AC055811.3-201ENST00000584952 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
AC055811.3-201ENST00000584952 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
AC055811.3-201ENST00000584952 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
AC055811.3-201ENST00000584952 PROSER2Q86WR7 435 aaPredicted RBP20.7■□□□□ 0.9
AC055811.3-201ENST00000584952 BCANQ96GW7 911 aa20.7■□□□□ 0.9
AC055811.3-201ENST00000584952 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
AC055811.3-201ENST00000584952 HDGFP51858 240 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms