RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NPATQ14207 1427 aa20.96■□□□□ 0.95
TRAF4-215ENST00000584944 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
TRAF4-215ENST00000584944 SHANK2Q9UPX8 1470 aa20.95■□□□□ 0.94
TRAF4-215ENST00000584944 RRP7BPQ9NSQ0 103 aa20.93■□□□□ 0.94
TRAF4-215ENST00000584944 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
TRAF4-215ENST00000584944 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
TRAF4-215ENST00000584944 CLTCQ00610 1675 aaKnown RBP20.91■□□□□ 0.94
TRAF4-215ENST00000584944 GGT6Q6P531 493 aa20.91■□□□□ 0.94
TRAF4-215ENST00000584944 MAST1Q9Y2H9 1570 aa20.91■□□□□ 0.94
TRAF4-215ENST00000584944 ADGBQ8N7X0 1667 aa20.9■□□□□ 0.94
TRAF4-215ENST00000584944 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
TRAF4-215ENST00000584944 KIF15Q9NS87 1388 aa20.89■□□□□ 0.93
TRAF4-215ENST00000584944 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
TRAF4-215ENST00000584944 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
TRAF4-215ENST00000584944 CAMSAP1Q5T5Y3 1602 aa20.87■□□□□ 0.93
TRAF4-215ENST00000584944 KIF3BO15066 747 aa20.85■□□□□ 0.93
TRAF4-215ENST00000584944 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
TRAF4-215ENST00000584944 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
TRAF4-215ENST00000584944 ROCK1Q13464 1354 aa20.83■□□□□ 0.92
TRAF4-215ENST00000584944 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
TRAF4-215ENST00000584944 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
TRAF4-215ENST00000584944 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
TRAF4-215ENST00000584944 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
TRAF4-215ENST00000584944 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
TRAF4-215ENST00000584944 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
TRAF4-215ENST00000584944 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
TRAF4-215ENST00000584944 PKD2Q13563 968 aa20.78■□□□□ 0.92
TRAF4-215ENST00000584944 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
TRAF4-215ENST00000584944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.919e-7■■■□□ 14.9
TRAF4-215ENST00000584944 ANKRD50Q9ULJ7 1429 aa20.76■□□□□ 0.91
TRAF4-215ENST00000584944 KANK1Q14678 1352 aa20.74■□□□□ 0.91
TRAF4-215ENST00000584944 A2ML1A8K2U0 1454 aa20.74■□□□□ 0.91
TRAF4-215ENST00000584944 FBXO31Q5XUX0 539 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-215ENST00000584944 ZNF335Q9H4Z2 1342 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-215ENST00000584944 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
TRAF4-215ENST00000584944 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
TRAF4-215ENST00000584944 EIF2AK4Q9P2K8 1649 aaKnown RBP20.72■□□□□ 0.91
TRAF4-215ENST00000584944 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
TRAF4-215ENST00000584944 PZPP20742 1482 aa20.7■□□□□ 0.9
TRAF4-215ENST00000584944 TNRQ92752 1358 aa20.7■□□□□ 0.9
TRAF4-215ENST00000584944 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
TRAF4-215ENST00000584944 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
TRAF4-215ENST00000584944 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
TRAF4-215ENST00000584944 NAIPQ13075 1403 aa20.64■□□□□ 0.89
TRAF4-215ENST00000584944 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.89
TRAF4-215ENST00000584944 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
TRAF4-215ENST00000584944 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
TRAF4-215ENST00000584944 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
TRAF4-215ENST00000584944 NUP155O75694 1391 aa20.6■□□□□ 0.89
TRAF4-215ENST00000584944 NEURL4Q96JN8 1562 aa20.6■□□□□ 0.89
TRAF4-215ENST00000584944 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
TRAF4-215ENST00000584944 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-215ENST00000584944 POLR1AO95602 1720 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-215ENST00000584944 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
TRAF4-215ENST00000584944 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
TRAF4-215ENST00000584944 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-215ENST00000584944 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
TRAF4-215ENST00000584944 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
TRAF4-215ENST00000584944 ABCC3O15438 1527 aa20.58■□□□□ 0.88
TRAF4-215ENST00000584944 ZC3H13Q5T200 1668 aaKnown RBP20.57■□□□□ 0.88
TRAF4-215ENST00000584944 UGGT1Q9NYU2 1555 aa20.56■□□□□ 0.88
TRAF4-215ENST00000584944 DEPDC5O75140 1603 aa20.56■□□□□ 0.88
TRAF4-215ENST00000584944 MROH1Q8NDA8 1641 aa20.55■□□□□ 0.88
TRAF4-215ENST00000584944 SPATA31D1Q6ZQQ2 1576 aa20.54■□□□□ 0.88
TRAF4-215ENST00000584944 MED14O60244 1454 aa20.53■□□□□ 0.88
TRAF4-215ENST00000584944 UNC13BO14795 1591 aa20.53■□□□□ 0.88
TRAF4-215ENST00000584944 CPS1P31327 1500 aa20.52■□□□□ 0.87
TRAF4-215ENST00000584944 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
TRAF4-215ENST00000584944 RAB3GAP2Q9H2M9 1393 aa20.51■□□□□ 0.87
TRAF4-215ENST00000584944 CEP152O94986 1710 aa20.5■□□□□ 0.87
TRAF4-215ENST00000584944 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
TRAF4-215ENST00000584944 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
TRAF4-215ENST00000584944 VWDEQ8N2E2 1590 aa20.5■□□□□ 0.87
TRAF4-215ENST00000584944 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
TRAF4-215ENST00000584944 LMTK2Q8IWU2 1503 aa20.47■□□□□ 0.87
TRAF4-215ENST00000584944 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.87
TRAF4-215ENST00000584944 TOM1O60784 492 aa20.45■□□□□ 0.86
TRAF4-215ENST00000584944 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
TRAF4-215ENST00000584944 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
TRAF4-215ENST00000584944 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
TRAF4-215ENST00000584944 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
TRAF4-215ENST00000584944 SOCS7O14512 581 aa20.44■□□□□ 0.86
TRAF4-215ENST00000584944 TET3O43151 1660 aa20.44■□□□□ 0.86
TRAF4-215ENST00000584944 HRCP23327 699 aa20.43■□□□□ 0.86
TRAF4-215ENST00000584944 UBR1Q8IWV7 1749 aa20.42■□□□□ 0.86
TRAF4-215ENST00000584944 RPRD2Q5VT52 1461 aaKnown RBP20.42■□□□□ 0.86
TRAF4-215ENST00000584944 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
TRAF4-215ENST00000584944 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
TRAF4-215ENST00000584944 HSPA1LP34931 641 aa20.4■□□□□ 0.86
TRAF4-215ENST00000584944 MPHOSPH9Q99550 1183 aa20.4■□□□□ 0.86
TRAF4-215ENST00000584944 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
TRAF4-215ENST00000584944 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.85
TRAF4-215ENST00000584944 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
TRAF4-215ENST00000584944 LTKP29376 864 aa20.37■□□□□ 0.85
TRAF4-215ENST00000584944 ALKQ9UM73 1620 aa20.37■□□□□ 0.85
TRAF4-215ENST00000584944 SLIT1O75093 1534 aa20.37■□□□□ 0.85
TRAF4-215ENST00000584944 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
TRAF4-215ENST00000584944 TXNDC2Q86VQ3 553 aa20.35■□□□□ 0.85
TRAF4-215ENST00000584944 SLC52A1Q9NWF4 448 aa20.35■□□□□ 0.85
TRAF4-215ENST00000584944 LRRC7Q96NW7 1537 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms