RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
LINC00473-205ENST00000584911 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
LINC00473-205ENST00000584911 AGLP35573 1532 aa16.38■□□□□ 0.21
LINC00473-205ENST00000584911 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
LINC00473-205ENST00000584911 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
LINC00473-205ENST00000584911 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
LINC00473-205ENST00000584911 HNRNPMP52272 730 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00473-205ENST00000584911 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
LINC00473-205ENST00000584911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00473-205ENST00000584911 NBR1Q14596 966 aa16.33■□□□□ 0.2
LINC00473-205ENST00000584911 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.2
LINC00473-205ENST00000584911 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
LINC00473-205ENST00000584911 INO80Q9ULG1 1556 aaPredicted RBP16.32■□□□□ 0.2
LINC00473-205ENST00000584911 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
LINC00473-205ENST00000584911 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
LINC00473-205ENST00000584911 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
LINC00473-205ENST00000584911 MBD5Q9P267 1494 aa16.3■□□□□ 0.2
LINC00473-205ENST00000584911 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
LINC00473-205ENST00000584911 NCOA2Q15596 1464 aa16.3■□□□□ 0.2
LINC00473-205ENST00000584911 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
LINC00473-205ENST00000584911 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
LINC00473-205ENST00000584911 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
LINC00473-205ENST00000584911 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
LINC00473-205ENST00000584911 HSPA2P54652 639 aa16.27■□□□□ 0.19
LINC00473-205ENST00000584911 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
LINC00473-205ENST00000584911 C3P01024 1663 aa16.26■□□□□ 0.19
LINC00473-205ENST00000584911 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
LINC00473-205ENST00000584911 IPO9Q96P70 1041 aaKnown RBP16.26■□□□□ 0.19
LINC00473-205ENST00000584911 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
LINC00473-205ENST00000584911 A2MP01023 1474 aa16.25■□□□□ 0.19
LINC00473-205ENST00000584911 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
LINC00473-205ENST00000584911 SETD1BQ9UPS6 1966 aaKnown RBP16.24■□□□□ 0.19
LINC00473-205ENST00000584911 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
LINC00473-205ENST00000584911 ADGBQ8N7X0 1667 aa16.24■□□□□ 0.19
LINC00473-205ENST00000584911 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
LINC00473-205ENST00000584911 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
LINC00473-205ENST00000584911 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
LINC00473-205ENST00000584911 MROH2AA6NES4 1674 aa16.21■□□□□ 0.19
LINC00473-205ENST00000584911 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
LINC00473-205ENST00000584911 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
LINC00473-205ENST00000584911 ADRA2BP18089 450 aa16.2■□□□□ 0.18
LINC00473-205ENST00000584911 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
LINC00473-205ENST00000584911 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
LINC00473-205ENST00000584911 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
LINC00473-205ENST00000584911 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
LINC00473-205ENST00000584911 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
LINC00473-205ENST00000584911 ARHGEF5Q12774 1597 aa16.18■□□□□ 0.18
LINC00473-205ENST00000584911 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
LINC00473-205ENST00000584911 PTPN23Q9H3S7 1636 aa16.18■□□□□ 0.18
LINC00473-205ENST00000584911 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
LINC00473-205ENST00000584911 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
LINC00473-205ENST00000584911 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
LINC00473-205ENST00000584911 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
LINC00473-205ENST00000584911 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
LINC00473-205ENST00000584911 CLTCQ00610 1675 aaKnown RBP16.16■□□□□ 0.18
LINC00473-205ENST00000584911 NPATQ14207 1427 aa16.16■□□□□ 0.18
LINC00473-205ENST00000584911 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
LINC00473-205ENST00000584911 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
LINC00473-205ENST00000584911 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
LINC00473-205ENST00000584911 GGT6Q6P531 493 aa16.14■□□□□ 0.17
LINC00473-205ENST00000584911 MIA2Q96PC5 1412 aa16.14■□□□□ 0.17
LINC00473-205ENST00000584911 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
LINC00473-205ENST00000584911 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
LINC00473-205ENST00000584911 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
LINC00473-205ENST00000584911 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
LINC00473-205ENST00000584911 NCOA1Q15788 1441 aa16.12■□□□□ 0.17
LINC00473-205ENST00000584911 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
LINC00473-205ENST00000584911 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
LINC00473-205ENST00000584911 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
LINC00473-205ENST00000584911 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
LINC00473-205ENST00000584911 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
LINC00473-205ENST00000584911 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
LINC00473-205ENST00000584911 NAIPQ13075 1403 aa16.1■□□□□ 0.17
LINC00473-205ENST00000584911 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
LINC00473-205ENST00000584911 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00473-205ENST00000584911 WASHC2CQ9Y4E1 1318 aa16.09■□□□□ 0.17
LINC00473-205ENST00000584911 KIF3BO15066 747 aa16.09■□□□□ 0.17
LINC00473-205ENST00000584911 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
LINC00473-205ENST00000584911 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.17
LINC00473-205ENST00000584911 USP35Q9P2H5 1018 aa16.08■□□□□ 0.16
LINC00473-205ENST00000584911 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
LINC00473-205ENST00000584911 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
LINC00473-205ENST00000584911 UBE2Q2Q8WVN8 375 aa16.06■□□□□ 0.16
LINC00473-205ENST00000584911 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
LINC00473-205ENST00000584911 PTPRTO14522 1441 aa16.06■□□□□ 0.16
LINC00473-205ENST00000584911 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
LINC00473-205ENST00000584911 KDM5DQ9BY66 1539 aa16.05■□□□□ 0.16
LINC00473-205ENST00000584911 RTN4Q9NQC3 1192 aaKnown RBP16.04■□□□□ 0.16
LINC00473-205ENST00000584911 CAMSAP1Q5T5Y3 1602 aa16.04■□□□□ 0.16
LINC00473-205ENST00000584911 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
LINC00473-205ENST00000584911 RNF17Q9BXT8 1623 aaKnown RBP16.03■□□□□ 0.16
LINC00473-205ENST00000584911 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
LINC00473-205ENST00000584911 CEP170BQ9Y4F5 1589 aaPredicted RBP16.03■□□□□ 0.16
LINC00473-205ENST00000584911 EIF2AK4Q9P2K8 1649 aaKnown RBP16.02■□□□□ 0.16
LINC00473-205ENST00000584911 PZPP20742 1482 aa16.02■□□□□ 0.15
LINC00473-205ENST00000584911 TCOF1Q13428 1488 aaKnown RBP16.01■□□□□ 0.15
LINC00473-205ENST00000584911 CROCC2H7BZ55 1655 aa16.01■□□□□ 0.15
LINC00473-205ENST00000584911 ABCC5O15440 1437 aa16.01■□□□□ 0.15
LINC00473-205ENST00000584911 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
LINC00473-205ENST00000584911 PLA2R1Q13018 1463 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms