RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
CTC1-213ENST00000584842 ERBINQ96RT1 1412 aa12.26□□□□□ -0.45
CTC1-213ENST00000584842 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
CTC1-213ENST00000584842 UHRF1BP1Q6BDS2 1440 aa12.25□□□□□ -0.45
CTC1-213ENST00000584842 ADGRL2O95490 1459 aa12.24□□□□□ -0.45
CTC1-213ENST00000584842 NPATQ14207 1427 aa12.24□□□□□ -0.45
CTC1-213ENST00000584842 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
CTC1-213ENST00000584842 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
CTC1-213ENST00000584842 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
CTC1-213ENST00000584842 CEP152O94986 1710 aa12.23□□□□□ -0.45
CTC1-213ENST00000584842 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
CTC1-213ENST00000584842 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
CTC1-213ENST00000584842 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
CTC1-213ENST00000584842 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
CTC1-213ENST00000584842 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
CTC1-213ENST00000584842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTC1-213ENST00000584842 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
CTC1-213ENST00000584842 ZNF142P52746 1687 aaPredicted RBP12.21□□□□□ -0.45
CTC1-213ENST00000584842 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.46
CTC1-213ENST00000584842 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
CTC1-213ENST00000584842 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
CTC1-213ENST00000584842 ABCC3O15438 1527 aa12.2□□□□□ -0.46
CTC1-213ENST00000584842 KANK1Q14678 1352 aa12.19□□□□□ -0.46
CTC1-213ENST00000584842 PZPP20742 1482 aa12.19□□□□□ -0.46
CTC1-213ENST00000584842 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
CTC1-213ENST00000584842 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
CTC1-213ENST00000584842 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
CTC1-213ENST00000584842 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
CTC1-213ENST00000584842 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
CTC1-213ENST00000584842 CFAP65Q6ZU64 1925 aaKnown RBP12.15□□□□□ -0.46
CTC1-213ENST00000584842 ITGAEP38570 1179 aa12.15□□□□□ -0.46
CTC1-213ENST00000584842 HSPA2P54652 639 aa12.15□□□□□ -0.46
CTC1-213ENST00000584842 TNRQ92752 1358 aa12.14□□□□□ -0.47
CTC1-213ENST00000584842 UNC13BO14795 1591 aa12.13□□□□□ -0.47
CTC1-213ENST00000584842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■■□ 21
CTC1-213ENST00000584842 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
CTC1-213ENST00000584842 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
CTC1-213ENST00000584842 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
CTC1-213ENST00000584842 LMTK2Q8IWU2 1503 aa12.12□□□□□ -0.47
CTC1-213ENST00000584842 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
CTC1-213ENST00000584842 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
CTC1-213ENST00000584842 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
CTC1-213ENST00000584842 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
CTC1-213ENST00000584842 TET3O43151 1660 aa12.11□□□□□ -0.47
CTC1-213ENST00000584842 ERVK-7P63135 1459 aa12.11□□□□□ -0.47
CTC1-213ENST00000584842 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
CTC1-213ENST00000584842 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
CTC1-213ENST00000584842 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
CTC1-213ENST00000584842 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
CTC1-213ENST00000584842 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
CTC1-213ENST00000584842 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
CTC1-213ENST00000584842 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
CTC1-213ENST00000584842 RPRD2Q5VT52 1461 aaKnown RBP12.07□□□□□ -0.48
CTC1-213ENST00000584842 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
CTC1-213ENST00000584842 PTPRTO14522 1441 aa12.05□□□□□ -0.48
CTC1-213ENST00000584842 KDM5AP29375 1690 aaKnown RBP12.05□□□□□ -0.48
CTC1-213ENST00000584842 PKD2Q13563 968 aa12.04□□□□□ -0.48
CTC1-213ENST00000584842 E9PCH4 1651 aa12.03□□□□□ -0.48
CTC1-213ENST00000584842 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
CTC1-213ENST00000584842 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
CTC1-213ENST00000584842 PIK3C2BO00750 1634 aa12.03□□□□□ -0.48
CTC1-213ENST00000584842 NUP155O75694 1391 aa12.03□□□□□ -0.48
CTC1-213ENST00000584842 NAIPQ13075 1403 aa12.03□□□□□ -0.48
CTC1-213ENST00000584842 SYNMO15061 1565 aa12.02□□□□□ -0.49
CTC1-213ENST00000584842 ADGRB3O60242 1522 aa12.01□□□□□ -0.49
CTC1-213ENST00000584842 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
CTC1-213ENST00000584842 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
CTC1-213ENST00000584842 NOS1P29475 1434 aa12□□□□□ -0.49
CTC1-213ENST00000584842 IQGAP1P46940 1657 aa12□□□□□ -0.49
CTC1-213ENST00000584842 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
CTC1-213ENST00000584842 NCKAP5LQ9HCH0 1330 aa11.99□□□□□ -0.49
CTC1-213ENST00000584842 NEURL4Q96JN8 1562 aa11.99□□□□□ -0.49
CTC1-213ENST00000584842 MYO5BQ9ULV0 1848 aa11.97□□□□□ -0.49
CTC1-213ENST00000584842 SLC52A1Q9NWF4 448 aa11.97□□□□□ -0.49
CTC1-213ENST00000584842 SLIT1O75093 1534 aa11.96□□□□□ -0.49
CTC1-213ENST00000584842 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
CTC1-213ENST00000584842 MED14O60244 1454 aa11.95□□□□□ -0.5
CTC1-213ENST00000584842 NPHP4O75161 1426 aaPredicted RBP11.95□□□□□ -0.5
CTC1-213ENST00000584842 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
CTC1-213ENST00000584842 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
CTC1-213ENST00000584842 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
CTC1-213ENST00000584842 ARHGAP23Q9P227 1491 aa11.95□□□□□ -0.5
CTC1-213ENST00000584842 TMEM131LA2VDJ0 1609 aa11.93□□□□□ -0.5
CTC1-213ENST00000584842 TMEM2Q9UHN6 1383 aa11.93□□□□□ -0.5
CTC1-213ENST00000584842 IDI1Q13907 227 aa11.93□□□□□ -0.5
CTC1-213ENST00000584842 KIF1BO60333 1816 aa11.93□□□□□ -0.5
CTC1-213ENST00000584842 TRPM2O94759 1503 aa11.92□□□□□ -0.5
CTC1-213ENST00000584842 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
CTC1-213ENST00000584842 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
CTC1-213ENST00000584842 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
CTC1-213ENST00000584842 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
CTC1-213ENST00000584842 CPS1P31327 1500 aa11.91□□□□□ -0.5
CTC1-213ENST00000584842 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
CTC1-213ENST00000584842 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
CTC1-213ENST00000584842 SETD5Q9C0A6 1442 aa11.9□□□□□ -0.5
CTC1-213ENST00000584842 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
CTC1-213ENST00000584842 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
CTC1-213ENST00000584842 FBXO41Q8TF61 875 aa11.89□□□□□ -0.51
CTC1-213ENST00000584842 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
CTC1-213ENST00000584842 PPP1R15AO75807 674 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms