RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 ARHGEF5Q12774 1597 aa26.45■■□□□ 1.82
CCDC57-219ENST00000584717 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
CCDC57-219ENST00000584717 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
CCDC57-219ENST00000584717 TNRQ92752 1358 aa26.43■■□□□ 1.82
CCDC57-219ENST00000584717 PZPP20742 1482 aa26.42■■□□□ 1.82
CCDC57-219ENST00000584717 FAM135AQ9P2D6 1515 aa26.41■■□□□ 1.82
CCDC57-219ENST00000584717 WASHC2CQ9Y4E1 1318 aa26.4■■□□□ 1.82
CCDC57-219ENST00000584717 VPS8Q8N3P4 1428 aa26.4■■□□□ 1.82
CCDC57-219ENST00000584717 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
CCDC57-219ENST00000584717 SPATA31D1Q6ZQQ2 1576 aa26.4■■□□□ 1.82
CCDC57-219ENST00000584717 ILDR2Q71H61 639 aa26.39■■□□□ 1.82
CCDC57-219ENST00000584717 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.81
CCDC57-219ENST00000584717 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
CCDC57-219ENST00000584717 UBAP1LF5GYI3 381 aa26.37■■□□□ 1.81
CCDC57-219ENST00000584717 TSPY4P0CV99 314 aa26.37■■□□□ 1.81
CCDC57-219ENST00000584717 TSPY10P0CW01 314 aa26.37■■□□□ 1.81
CCDC57-219ENST00000584717 NEURL4Q96JN8 1562 aa26.36■■□□□ 1.81
CCDC57-219ENST00000584717 MAST1Q9Y2H9 1570 aa26.32■■□□□ 1.8
CCDC57-219ENST00000584717 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
CCDC57-219ENST00000584717 MIA2Q96PC5 1412 aa26.31■■□□□ 1.8
CCDC57-219ENST00000584717 KANK4Q5T7N3 995 aaPredicted RBP26.3■■□□□ 1.8
CCDC57-219ENST00000584717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
CCDC57-219ENST00000584717 NLRP1Q9C000 1473 aa26.29■■□□□ 1.8
CCDC57-219ENST00000584717 UGGT1Q9NYU2 1555 aa26.28■■□□□ 1.8
CCDC57-219ENST00000584717 ABCC3O15438 1527 aa26.27■■□□□ 1.8
CCDC57-219ENST00000584717 ZC3H13Q5T200 1668 aaKnown RBP26.26■■□□□ 1.79
CCDC57-219ENST00000584717 MAP3K1Q13233 1512 aa26.25■■□□□ 1.79
CCDC57-219ENST00000584717 MYOM3Q5VTT5 1437 aa26.25■■□□□ 1.79
CCDC57-219ENST00000584717 ANKLE2Q86XL3 938 aa26.25■■□□□ 1.79
CCDC57-219ENST00000584717 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
CCDC57-219ENST00000584717 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
CCDC57-219ENST00000584717 THEMISQ8N1K5 641 aaPredicted RBP26.24■■□□□ 1.79
CCDC57-219ENST00000584717 CPS1P31327 1500 aa26.24■■□□□ 1.79
CCDC57-219ENST00000584717 MROH1Q8NDA8 1641 aa26.23■■□□□ 1.79
CCDC57-219ENST00000584717 SOCS7O14512 581 aa26.21■■□□□ 1.79
CCDC57-219ENST00000584717 DEPDC5O75140 1603 aa26.21■■□□□ 1.79
CCDC57-219ENST00000584717 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.79
CCDC57-219ENST00000584717 CEP152O94986 1710 aa26.2■■□□□ 1.79
CCDC57-219ENST00000584717 NPHP4O75161 1426 aaPredicted RBP26.2■■□□□ 1.78
CCDC57-219ENST00000584717 SCAF1Q9H7N4 1312 aaKnown RBP26.19■■□□□ 1.78
CCDC57-219ENST00000584717 ERVK-7P63135 1459 aa26.19■■□□□ 1.78
CCDC57-219ENST00000584717 MED14O60244 1454 aa26.18■■□□□ 1.78
CCDC57-219ENST00000584717 DUOX2Q9NRD8 1548 aa26.17■■□□□ 1.78
CCDC57-219ENST00000584717 IQGAP1P46940 1657 aa26.16■■□□□ 1.78
CCDC57-219ENST00000584717 PIP4K2BP78356 416 aa26.16■■□□□ 1.78
CCDC57-219ENST00000584717 CFAP65Q6ZU64 1925 aaKnown RBP26.15■■□□□ 1.78
CCDC57-219ENST00000584717 CROCC2H7BZ55 1655 aa26.14■■□□□ 1.78
CCDC57-219ENST00000584717 TOM1O60784 492 aa26.12■■□□□ 1.77
CCDC57-219ENST00000584717 KIF15Q9NS87 1388 aa26.11■■□□□ 1.77
CCDC57-219ENST00000584717 HSPA1LP34931 641 aa26.11■■□□□ 1.77
CCDC57-219ENST00000584717 PTPN23Q9H3S7 1636 aa26.1■■□□□ 1.77
CCDC57-219ENST00000584717 UBR1Q8IWV7 1749 aa26.1■■□□□ 1.77
CCDC57-219ENST00000584717 ABCC5O15440 1437 aa26.09■■□□□ 1.77
CCDC57-219ENST00000584717 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
CCDC57-219ENST00000584717 STRCP1A6NGW2 1772 aa26.07■■□□□ 1.76
CCDC57-219ENST00000584717 RRP7BPQ9NSQ0 103 aa26.07■■□□□ 1.76
CCDC57-219ENST00000584717 ERBINQ96RT1 1412 aa26.06■■□□□ 1.76
CCDC57-219ENST00000584717 ALKQ9UM73 1620 aa26.05■■□□□ 1.76
CCDC57-219ENST00000584717 APLP2Q06481 763 aa26.04■■□□□ 1.76
CCDC57-219ENST00000584717 DAPK1P53355 1430 aa26.04■■□□□ 1.76
CCDC57-219ENST00000584717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.76
CCDC57-219ENST00000584717 ARHGAP31Q2M1Z3 1444 aa26.02■■□□□ 1.76
CCDC57-219ENST00000584717 SCAF11Q99590 1463 aaKnown RBP26.02■■□□□ 1.76
CCDC57-219ENST00000584717 SYNMO15061 1565 aa26.01■■□□□ 1.75
CCDC57-219ENST00000584717 MED1Q15648 1581 aaPredicted RBP26.01■■□□□ 1.75
CCDC57-219ENST00000584717 FGD6Q6ZV73 1430 aa26.01■■□□□ 1.75
CCDC57-219ENST00000584717 LRRC7Q96NW7 1537 aa26.01■■□□□ 1.75
CCDC57-219ENST00000584717 SLIT1O75093 1534 aa25.98■■□□□ 1.75
CCDC57-219ENST00000584717 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
CCDC57-219ENST00000584717 PIK3C2BO00750 1634 aa25.97■■□□□ 1.75
CCDC57-219ENST00000584717 LTKP29376 864 aa25.97■■□□□ 1.75
CCDC57-219ENST00000584717 CHIC2Q9UKJ5 165 aa25.97■■□□□ 1.75
CCDC57-219ENST00000584717 TXNDC2Q86VQ3 553 aa25.96■■□□□ 1.75
CCDC57-219ENST00000584717 KANK1Q14678 1352 aa25.95■■□□□ 1.75
CCDC57-219ENST00000584717 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
CCDC57-219ENST00000584717 ANKRD30AQ9BXX3 1397 aa25.93■■□□□ 1.74
CCDC57-219ENST00000584717 EID1Q9Y6B2 187 aa25.91■■□□□ 1.74
CCDC57-219ENST00000584717 LMTK2Q8IWU2 1503 aa25.89■■□□□ 1.74
CCDC57-219ENST00000584717 STAG3Q9UJ98 1225 aa25.89■■□□□ 1.74
CCDC57-219ENST00000584717 TMEM2Q9UHN6 1383 aa25.88■■□□□ 1.73
CCDC57-219ENST00000584717 EFCAB6Q5THR3 1501 aa25.87■■□□□ 1.73
CCDC57-219ENST00000584717 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
CCDC57-219ENST00000584717 KDM5AP29375 1690 aaKnown RBP25.84■■□□□ 1.73
CCDC57-219ENST00000584717 IDI1Q13907 227 aa25.84■■□□□ 1.73
CCDC57-219ENST00000584717 ADGRL2O95490 1459 aa25.82■■□□□ 1.72
CCDC57-219ENST00000584717 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
CCDC57-219ENST00000584717 FAM50AQ14320 339 aaKnown RBP25.8■■□□□ 1.72
CCDC57-219ENST00000584717 NOS1P29475 1434 aa25.8■■□□□ 1.72
CCDC57-219ENST00000584717 ADGRB3O60242 1522 aa25.79■■□□□ 1.72
CCDC57-219ENST00000584717 SLC26A8Q96RN1 970 aa25.76■■□□□ 1.71
CCDC57-219ENST00000584717 TET3O43151 1660 aa25.75■■□□□ 1.71
CCDC57-219ENST00000584717 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
CCDC57-219ENST00000584717 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
CCDC57-219ENST00000584717 KCNA6P17658 529 aa25.71■■□□□ 1.71
CCDC57-219ENST00000584717 RBM33Q96EV2 1170 aaKnown RBP25.7■■□□□ 1.7
CCDC57-219ENST00000584717 SLC52A1Q9NWF4 448 aa25.7■■□□□ 1.7
CCDC57-219ENST00000584717 RPRD2Q5VT52 1461 aaKnown RBP25.7■■□□□ 1.7
CCDC57-219ENST00000584717 MYO5BQ9ULV0 1848 aa25.68■■□□□ 1.7
CCDC57-219ENST00000584717 PROSER2Q86WR7 435 aaPredicted RBP25.68■■□□□ 1.7
CCDC57-219ENST00000584717 BCANQ96GW7 911 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms