RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
CSNK1D-224ENST00000584672 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
CSNK1D-224ENST00000584672 TNRQ92752 1358 aa23.15■■□□□ 1.3
CSNK1D-224ENST00000584672 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
CSNK1D-224ENST00000584672 VWDEQ8N2E2 1590 aa23.13■■□□□ 1.29
CSNK1D-224ENST00000584672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.13■■□□□ 1.294e-6■■■■□ 23.1
CSNK1D-224ENST00000584672 ALKQ9UM73 1620 aa23.12■■□□□ 1.29
CSNK1D-224ENST00000584672 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
CSNK1D-224ENST00000584672 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
CSNK1D-224ENST00000584672 KIF3BO15066 747 aa23.07■■□□□ 1.28
CSNK1D-224ENST00000584672 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
CSNK1D-224ENST00000584672 PZPP20742 1482 aa23.06■■□□□ 1.28
CSNK1D-224ENST00000584672 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
CSNK1D-224ENST00000584672 DHX29Q7Z478 1369 aaKnown RBP23.05■■□□□ 1.28
CSNK1D-224ENST00000584672 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
CSNK1D-224ENST00000584672 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
CSNK1D-224ENST00000584672 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
CSNK1D-224ENST00000584672 STRCP1A6NGW2 1772 aa23.04■■□□□ 1.28
CSNK1D-224ENST00000584672 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
CSNK1D-224ENST00000584672 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
CSNK1D-224ENST00000584672 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
CSNK1D-224ENST00000584672 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
CSNK1D-224ENST00000584672 WASHC2CQ9Y4E1 1318 aa23.01■■□□□ 1.27
CSNK1D-224ENST00000584672 DEPDC5O75140 1603 aa23■■□□□ 1.27
CSNK1D-224ENST00000584672 FAM135AQ9P2D6 1515 aa23■■□□□ 1.27
CSNK1D-224ENST00000584672 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
CSNK1D-224ENST00000584672 MED14O60244 1454 aa22.98■■□□□ 1.27
CSNK1D-224ENST00000584672 LRRC7Q96NW7 1537 aa22.98■■□□□ 1.27
CSNK1D-224ENST00000584672 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
CSNK1D-224ENST00000584672 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
CSNK1D-224ENST00000584672 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
CSNK1D-224ENST00000584672 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
CSNK1D-224ENST00000584672 SYNMO15061 1565 aa22.94■■□□□ 1.26
CSNK1D-224ENST00000584672 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
CSNK1D-224ENST00000584672 RGS17Q9UGC6 210 aaPredicted RBP22.91■■□□□ 1.26
CSNK1D-224ENST00000584672 ZC3H13Q5T200 1668 aaKnown RBP22.88■■□□□ 1.25
CSNK1D-224ENST00000584672 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
CSNK1D-224ENST00000584672 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-224ENST00000584672 ABCC3O15438 1527 aa22.85■■□□□ 1.25
CSNK1D-224ENST00000584672 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-224ENST00000584672 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
CSNK1D-224ENST00000584672 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
CSNK1D-224ENST00000584672 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
CSNK1D-224ENST00000584672 CEP152O94986 1710 aa22.82■■□□□ 1.24
CSNK1D-224ENST00000584672 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-224ENST00000584672 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
CSNK1D-224ENST00000584672 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
CSNK1D-224ENST00000584672 TSPY4P0CV99 314 aa22.77■■□□□ 1.24
CSNK1D-224ENST00000584672 TSPY10P0CW01 314 aa22.77■■□□□ 1.24
CSNK1D-224ENST00000584672 LTKP29376 864 aa22.76■■□□□ 1.23
CSNK1D-224ENST00000584672 SETD1AO15047 1707 aaKnown RBP22.76■■□□□ 1.23
CSNK1D-224ENST00000584672 MROH1Q8NDA8 1641 aa22.75■■□□□ 1.23
CSNK1D-224ENST00000584672 RSPH4AQ5TD94 716 aa22.75■■□□□ 1.23
CSNK1D-224ENST00000584672 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
CSNK1D-224ENST00000584672 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
CSNK1D-224ENST00000584672 ARHGAP23Q9P227 1491 aa22.71■■□□□ 1.23
CSNK1D-224ENST00000584672 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
CSNK1D-224ENST00000584672 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
CSNK1D-224ENST00000584672 SLIT1O75093 1534 aa22.69■■□□□ 1.22
CSNK1D-224ENST00000584672 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-224ENST00000584672 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
CSNK1D-224ENST00000584672 PIK3C2BO00750 1634 aa22.67■■□□□ 1.22
CSNK1D-224ENST00000584672 TMEM94Q12767 1356 aa22.66■■□□□ 1.22
CSNK1D-224ENST00000584672 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
CSNK1D-224ENST00000584672 MAP3K1Q13233 1512 aa22.62■■□□□ 1.21
CSNK1D-224ENST00000584672 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
CSNK1D-224ENST00000584672 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
CSNK1D-224ENST00000584672 PROSER2Q86WR7 435 aaPredicted RBP22.59■■□□□ 1.21
CSNK1D-224ENST00000584672 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
CSNK1D-224ENST00000584672 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
CSNK1D-224ENST00000584672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.58■■□□□ 1.21
CSNK1D-224ENST00000584672 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-224ENST00000584672 PHLPP1O60346 1717 aa22.57■■□□□ 1.2
CSNK1D-224ENST00000584672 KCNA6P17658 529 aa22.55■■□□□ 1.2
CSNK1D-224ENST00000584672 EFCAB6Q5THR3 1501 aa22.55■■□□□ 1.2
CSNK1D-224ENST00000584672 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
CSNK1D-224ENST00000584672 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
CSNK1D-224ENST00000584672 KIF15Q9NS87 1388 aa22.52■■□□□ 1.2
CSNK1D-224ENST00000584672 TET3O43151 1660 aa22.51■■□□□ 1.19
CSNK1D-224ENST00000584672 BCANQ96GW7 911 aa22.5■■□□□ 1.19
CSNK1D-224ENST00000584672 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
CSNK1D-224ENST00000584672 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
CSNK1D-224ENST00000584672 MSH6P52701 1360 aa22.5■■□□□ 1.19
CSNK1D-224ENST00000584672 JCADQ9P266 1359 aa22.49■■□□□ 1.19
CSNK1D-224ENST00000584672 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
CSNK1D-224ENST00000584672 NKTRP30414 1462 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-224ENST00000584672 IDI1Q13907 227 aa22.48■■□□□ 1.19
CSNK1D-224ENST00000584672 CROCC2H7BZ55 1655 aa22.48■■□□□ 1.19
CSNK1D-224ENST00000584672 KDM5AP29375 1690 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-224ENST00000584672 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-224ENST00000584672 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
CSNK1D-224ENST00000584672 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
CSNK1D-224ENST00000584672 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
CSNK1D-224ENST00000584672 LRP6O75581 1613 aa22.46■■□□□ 1.19
CSNK1D-224ENST00000584672 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
CSNK1D-224ENST00000584672 KANK1Q14678 1352 aa22.45■■□□□ 1.18
CSNK1D-224ENST00000584672 ADGRB3O60242 1522 aa22.44■■□□□ 1.18
CSNK1D-224ENST00000584672 MEX3CQ5U5Q3 659 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-224ENST00000584672 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.186e-11■■■■■ 68.6
CSNK1D-224ENST00000584672 ABCC5O15440 1437 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms