RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TNRQ92752 1358 aa20.81■□□□□ 0.92
CDK5RAP3-234ENST00000584525 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
CDK5RAP3-234ENST00000584525 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
CDK5RAP3-234ENST00000584525 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
CDK5RAP3-234ENST00000584525 NCOA2Q15596 1464 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
CDK5RAP3-234ENST00000584525 PIP4K2BP78356 416 aa20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 CAMSAP2Q08AD1 1489 aa20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 DNMT1P26358 1616 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-234ENST00000584525 PZPP20742 1482 aa20.74■□□□□ 0.91
CDK5RAP3-234ENST00000584525 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
CDK5RAP3-234ENST00000584525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK5RAP3-234ENST00000584525 TOM1O60784 492 aa20.72■□□□□ 0.91
CDK5RAP3-234ENST00000584525 MIA2Q96PC5 1412 aa20.71■□□□□ 0.91
CDK5RAP3-234ENST00000584525 HSPA1LP34931 641 aa20.7■□□□□ 0.9
CDK5RAP3-234ENST00000584525 SHANK2Q9UPX8 1470 aa20.69■□□□□ 0.9
CDK5RAP3-234ENST00000584525 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
CDK5RAP3-234ENST00000584525 CPS1P31327 1500 aa20.66■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NEURL4Q96JN8 1562 aa20.64■□□□□ 0.9
CDK5RAP3-234ENST00000584525 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.89
CDK5RAP3-234ENST00000584525 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
CDK5RAP3-234ENST00000584525 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
CDK5RAP3-234ENST00000584525 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
CDK5RAP3-234ENST00000584525 MED14O60244 1454 aa20.59■□□□□ 0.89
CDK5RAP3-234ENST00000584525 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
CDK5RAP3-234ENST00000584525 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
CDK5RAP3-234ENST00000584525 VWDEQ8N2E2 1590 aa20.57■□□□□ 0.88
CDK5RAP3-234ENST00000584525 ABCC3O15438 1527 aa20.57■□□□□ 0.88
CDK5RAP3-234ENST00000584525 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
CDK5RAP3-234ENST00000584525 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-234ENST00000584525 ERVK-7P63135 1459 aa20.54■□□□□ 0.88
CDK5RAP3-234ENST00000584525 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-234ENST00000584525 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
CDK5RAP3-234ENST00000584525 MYOM3Q5VTT5 1437 aa20.52■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 TXNDC2Q86VQ3 553 aa20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
CDK5RAP3-234ENST00000584525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.878e-9■■□□□ 13
CDK5RAP3-234ENST00000584525 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
CDK5RAP3-234ENST00000584525 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 LTKP29376 864 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
CDK5RAP3-234ENST00000584525 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 APLP2Q06481 763 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
CDK5RAP3-234ENST00000584525 ZC3H13Q5T200 1668 aaKnown RBP20.46■□□□□ 0.87
CDK5RAP3-234ENST00000584525 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
CDK5RAP3-234ENST00000584525 EIF2AK4Q9P2K8 1649 aaKnown RBP20.45■□□□□ 0.87
CDK5RAP3-234ENST00000584525 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
CDK5RAP3-234ENST00000584525 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ABCC5O15440 1437 aa20.43■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
CDK5RAP3-234ENST00000584525 KANK1Q14678 1352 aa20.4■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
CDK5RAP3-234ENST00000584525 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
CDK5RAP3-234ENST00000584525 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
CDK5RAP3-234ENST00000584525 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SLIT1O75093 1534 aa20.37■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SYNMO15061 1565 aa20.37■□□□□ 0.85
CDK5RAP3-234ENST00000584525 CEP152O94986 1710 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 IDI1Q13907 227 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 PRDM15P57071 1507 aaPredicted RBP20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 DAPK1P53355 1430 aa20.36■□□□□ 0.85
CDK5RAP3-234ENST00000584525 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
CDK5RAP3-234ENST00000584525 SLC26A8Q96RN1 970 aa20.32■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 KCNA6P17658 529 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 BCANQ96GW7 911 aa20.31■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
CDK5RAP3-234ENST00000584525 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
CDK5RAP3-234ENST00000584525 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
CDK5RAP3-234ENST00000584525 CFAP65Q6ZU64 1925 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-234ENST00000584525 FAM135BQ49AJ0 1406 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 PIK3C2BO00750 1634 aa20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 RGS17Q9UGC6 210 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-234ENST00000584525 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
CDK5RAP3-234ENST00000584525 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
CDK5RAP3-234ENST00000584525 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-234ENST00000584525 CROCC2H7BZ55 1655 aa20.23■□□□□ 0.83
CDK5RAP3-234ENST00000584525 NOS1P29475 1434 aa20.23■□□□□ 0.83
CDK5RAP3-234ENST00000584525 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-234ENST00000584525 TET3O43151 1660 aa20.19■□□□□ 0.82
CDK5RAP3-234ENST00000584525 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-234ENST00000584525 MSH6P52701 1360 aa20.18■□□□□ 0.82
CDK5RAP3-234ENST00000584525 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
CDK5RAP3-234ENST00000584525 ANKRD50Q9ULJ7 1429 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms