RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 RRP7BPQ9NSQ0 103 aa21.16■□□□□ 0.98
CDK5RAP3-233ENST00000584186 MYO3AQ8NEV4 1616 aa21.15■□□□□ 0.98
CDK5RAP3-233ENST00000584186 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP3-233ENST00000584186 CAMSAP1Q5T5Y3 1602 aa21.14■□□□□ 0.97
CDK5RAP3-233ENST00000584186 DAPK1P53355 1430 aa21.13■□□□□ 0.97
CDK5RAP3-233ENST00000584186 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
CDK5RAP3-233ENST00000584186 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 KIF15Q9NS87 1388 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 CHIC2Q9UKJ5 165 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 DUOX2Q9NRD8 1548 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 FAM135AQ9P2D6 1515 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 CROCC2H7BZ55 1655 aa21.12■□□□□ 0.97
CDK5RAP3-233ENST00000584186 CEP170BQ9Y4F5 1589 aaPredicted RBP21.11■□□□□ 0.97
CDK5RAP3-233ENST00000584186 CERKQ8TCT0 537 aa21.11■□□□□ 0.97
CDK5RAP3-233ENST00000584186 PZPP20742 1482 aa21.11■□□□□ 0.97
CDK5RAP3-233ENST00000584186 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
CDK5RAP3-233ENST00000584186 TNRQ92752 1358 aa21.1■□□□□ 0.97
CDK5RAP3-233ENST00000584186 NCKAP5LQ9HCH0 1330 aa21.1■□□□□ 0.97
CDK5RAP3-233ENST00000584186 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-233ENST00000584186 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-233ENST00000584186 PTPRTO14522 1441 aa21.09■□□□□ 0.97
CDK5RAP3-233ENST00000584186 ZNF142P52746 1687 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-233ENST00000584186 ABCC3O15438 1527 aa21.07■□□□□ 0.96
CDK5RAP3-233ENST00000584186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.962e-10■■□□□ 11.5
CDK5RAP3-233ENST00000584186 ANKRD30AQ9BXX3 1397 aa21.06■□□□□ 0.96
CDK5RAP3-233ENST00000584186 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
CDK5RAP3-233ENST00000584186 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-233ENST00000584186 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
CDK5RAP3-233ENST00000584186 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
CDK5RAP3-233ENST00000584186 ZC3H13Q5T200 1668 aaKnown RBP21.02■□□□□ 0.96
CDK5RAP3-233ENST00000584186 PLA2R1Q13018 1463 aa21.02■□□□□ 0.96
CDK5RAP3-233ENST00000584186 PKD2Q13563 968 aa21.02■□□□□ 0.96
CDK5RAP3-233ENST00000584186 CEP152O94986 1710 aa21.01■□□□□ 0.95
CDK5RAP3-233ENST00000584186 NLRP1Q9C000 1473 aa20.98■□□□□ 0.95
CDK5RAP3-233ENST00000584186 KANK1Q14678 1352 aa20.97■□□□□ 0.95
CDK5RAP3-233ENST00000584186 PRDM15P57071 1507 aaPredicted RBP20.97■□□□□ 0.95
CDK5RAP3-233ENST00000584186 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
CDK5RAP3-233ENST00000584186 THEMISQ8N1K5 641 aaPredicted RBP20.96■□□□□ 0.95
CDK5RAP3-233ENST00000584186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.95
CDK5RAP3-233ENST00000584186 ADGRL2O95490 1459 aa20.94■□□□□ 0.94
CDK5RAP3-233ENST00000584186 SPATA31D1Q6ZQQ2 1576 aa20.94■□□□□ 0.94
CDK5RAP3-233ENST00000584186 UGGT1Q9NYU2 1555 aa20.94■□□□□ 0.94
CDK5RAP3-233ENST00000584186 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
CDK5RAP3-233ENST00000584186 ANKLE2Q86XL3 938 aa20.93■□□□□ 0.94
CDK5RAP3-233ENST00000584186 CFAP65Q6ZU64 1925 aaKnown RBP20.93■□□□□ 0.94
CDK5RAP3-233ENST00000584186 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
CDK5RAP3-233ENST00000584186 ITGAEP38570 1179 aa20.92■□□□□ 0.94
CDK5RAP3-233ENST00000584186 LTBP4Q8N2S1 1624 aa20.92■□□□□ 0.94
CDK5RAP3-233ENST00000584186 ARHGAP31Q2M1Z3 1444 aa20.89■□□□□ 0.94
CDK5RAP3-233ENST00000584186 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
CDK5RAP3-233ENST00000584186 POLR1AO95602 1720 aaPredicted RBP20.89■□□□□ 0.93
CDK5RAP3-233ENST00000584186 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
CDK5RAP3-233ENST00000584186 VWDEQ8N2E2 1590 aa20.84■□□□□ 0.93
CDK5RAP3-233ENST00000584186 LMTK2Q8IWU2 1503 aa20.83■□□□□ 0.93
CDK5RAP3-233ENST00000584186 STAG3Q9UJ98 1225 aa20.83■□□□□ 0.93
CDK5RAP3-233ENST00000584186 NPHP4O75161 1426 aaPredicted RBP20.83■□□□□ 0.93
CDK5RAP3-233ENST00000584186 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
CDK5RAP3-233ENST00000584186 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
CDK5RAP3-233ENST00000584186 EFCAB6Q5THR3 1501 aa20.8■□□□□ 0.92
CDK5RAP3-233ENST00000584186 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
CDK5RAP3-233ENST00000584186 MED14O60244 1454 aa20.79■□□□□ 0.92
CDK5RAP3-233ENST00000584186 IDI1Q13907 227 aa20.78■□□□□ 0.92
CDK5RAP3-233ENST00000584186 TXNDC2Q86VQ3 553 aa20.78■□□□□ 0.92
CDK5RAP3-233ENST00000584186 PIK3C2BO00750 1634 aa20.77■□□□□ 0.92
CDK5RAP3-233ENST00000584186 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
CDK5RAP3-233ENST00000584186 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
CDK5RAP3-233ENST00000584186 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
CDK5RAP3-233ENST00000584186 LTKP29376 864 aa20.75■□□□□ 0.91
CDK5RAP3-233ENST00000584186 SYNMO15061 1565 aa20.75■□□□□ 0.91
CDK5RAP3-233ENST00000584186 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
CDK5RAP3-233ENST00000584186 NOS1P29475 1434 aa20.74■□□□□ 0.91
CDK5RAP3-233ENST00000584186 UNC13BO14795 1591 aa20.73■□□□□ 0.91
CDK5RAP3-233ENST00000584186 SLIT1O75093 1534 aa20.73■□□□□ 0.91
CDK5RAP3-233ENST00000584186 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
CDK5RAP3-233ENST00000584186 ARHGAP23Q9P227 1491 aa20.72■□□□□ 0.91
CDK5RAP3-233ENST00000584186 TET3O43151 1660 aa20.72■□□□□ 0.91
CDK5RAP3-233ENST00000584186 CPS1P31327 1500 aa20.72■□□□□ 0.91
CDK5RAP3-233ENST00000584186 TMEM2Q9UHN6 1383 aa20.72■□□□□ 0.91
CDK5RAP3-233ENST00000584186 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
CDK5RAP3-233ENST00000584186 NUP155O75694 1391 aa20.71■□□□□ 0.91
CDK5RAP3-233ENST00000584186 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
CDK5RAP3-233ENST00000584186 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
CDK5RAP3-233ENST00000584186 ADGRB3O60242 1522 aa20.67■□□□□ 0.9
CDK5RAP3-233ENST00000584186 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP3-233ENST00000584186 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP3-233ENST00000584186 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
CDK5RAP3-233ENST00000584186 CHGAP10645 457 aaKnown RBP20.65■□□□□ 0.9
CDK5RAP3-233ENST00000584186 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
CDK5RAP3-233ENST00000584186 PIP4K2BP78356 416 aa20.64■□□□□ 0.89
CDK5RAP3-233ENST00000584186 BCANQ96GW7 911 aa20.64■□□□□ 0.89
CDK5RAP3-233ENST00000584186 E9PCH4 1651 aa20.64■□□□□ 0.89
CDK5RAP3-233ENST00000584186 TOM1O60784 492 aa20.63■□□□□ 0.89
CDK5RAP3-233ENST00000584186 STRCP1A6NGW2 1772 aa20.62■□□□□ 0.89
CDK5RAP3-233ENST00000584186 SLC26A8Q96RN1 970 aa20.61■□□□□ 0.89
CDK5RAP3-233ENST00000584186 LRRC7Q96NW7 1537 aa20.59■□□□□ 0.89
CDK5RAP3-233ENST00000584186 PPP1R15AO75807 674 aaPredicted RBP20.59■□□□□ 0.89
CDK5RAP3-233ENST00000584186 NAIPQ13075 1403 aa20.58■□□□□ 0.88
CDK5RAP3-233ENST00000584186 HDGFP51858 240 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms