RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
CDK5RAP3-232ENST00000584168 SAMD9LQ8IVG5 1584 aa15.97■□□□□ 0.15
CDK5RAP3-232ENST00000584168 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
CDK5RAP3-232ENST00000584168 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
CDK5RAP3-232ENST00000584168 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
CDK5RAP3-232ENST00000584168 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-232ENST00000584168 FANCAO15360 1455 aa15.94■□□□□ 0.14
CDK5RAP3-232ENST00000584168 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 SYCP2Q9BX26 1530 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 ARHGEF5Q12774 1597 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
CDK5RAP3-232ENST00000584168 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-232ENST00000584168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■□□□ 13.4
CDK5RAP3-232ENST00000584168 ABCC1P33527 1531 aa15.92■□□□□ 0.14
CDK5RAP3-232ENST00000584168 GSE1Q14687 1217 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
CDK5RAP3-232ENST00000584168 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NAP1L2Q9ULW6 460 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
CDK5RAP3-232ENST00000584168 NEO1Q92859 1461 aa15.89■□□□□ 0.13
CDK5RAP3-232ENST00000584168 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-232ENST00000584168 CCDC141Q6ZP82 1450 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 MPHOSPH9Q99550 1183 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PRDM4Q9UKN5 801 aa15.88■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGRL1O94910 1474 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 TEX14Q8IWB6 1497 aa15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
CDK5RAP3-232ENST00000584168 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGBQ8N7X0 1667 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
CDK5RAP3-232ENST00000584168 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
CDK5RAP3-232ENST00000584168 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.13
CDK5RAP3-232ENST00000584168 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.13
CDK5RAP3-232ENST00000584168 ADGRL2O95490 1459 aa15.83■□□□□ 0.12
CDK5RAP3-232ENST00000584168 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ZNF326Q5BKZ1 582 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 RGS3P49796 1198 aa15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-232ENST00000584168 NUP155O75694 1391 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 ZNF518AQ6AHZ1 1483 aa15.8■□□□□ 0.12
CDK5RAP3-232ENST00000584168 POGZQ7Z3K3 1410 aa15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 PKD2Q13563 968 aa15.79■□□□□ 0.12
CDK5RAP3-232ENST00000584168 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-232ENST00000584168 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
CDK5RAP3-232ENST00000584168 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-232ENST00000584168 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-232ENST00000584168 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
CDK5RAP3-232ENST00000584168 KDM5CP41229 1560 aa15.76■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 RICTORQ6R327 1708 aa15.75■□□□□ 0.11
CDK5RAP3-232ENST00000584168 IPO4Q8TEX9 1081 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
CDK5RAP3-232ENST00000584168 KIF3BO15066 747 aa15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 BRD2P25440 801 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 DHX37Q8IY37 1157 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-232ENST00000584168 B4GALNT3Q6L9W6 998 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 HECW2Q9P2P5 1572 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 ANP32CO43423 234 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 FRMPD1Q5SYB0 1578 aa15.72■□□□□ 0.11
CDK5RAP3-232ENST00000584168 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
CDK5RAP3-232ENST00000584168 PZPP20742 1482 aa15.71■□□□□ 0.1
CDK5RAP3-232ENST00000584168 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.1
CDK5RAP3-232ENST00000584168 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 GGT6Q6P531 493 aa15.7■□□□□ 0.1
CDK5RAP3-232ENST00000584168 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms