RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
ERBB2-217ENST00000584099 STRCQ7RTU9 1775 aa20.32■□□□□ 0.84
ERBB2-217ENST00000584099 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
ERBB2-217ENST00000584099 PZPP20742 1482 aa20.3■□□□□ 0.84
ERBB2-217ENST00000584099 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
ERBB2-217ENST00000584099 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
ERBB2-217ENST00000584099 CEP170BQ9Y4F5 1589 aaPredicted RBP20.27■□□□□ 0.84
ERBB2-217ENST00000584099 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
ERBB2-217ENST00000584099 CAMSAP1Q5T5Y3 1602 aa20.27■□□□□ 0.83
ERBB2-217ENST00000584099 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
ERBB2-217ENST00000584099 TNRQ92752 1358 aa20.25■□□□□ 0.83
ERBB2-217ENST00000584099 MYO3AQ8NEV4 1616 aa20.25■□□□□ 0.83
ERBB2-217ENST00000584099 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
ERBB2-217ENST00000584099 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
ERBB2-217ENST00000584099 DUOX2Q9NRD8 1548 aa20.23■□□□□ 0.83
ERBB2-217ENST00000584099 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
ERBB2-217ENST00000584099 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
ERBB2-217ENST00000584099 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
ERBB2-217ENST00000584099 ABCC5O15440 1437 aa20.22■□□□□ 0.83
ERBB2-217ENST00000584099 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
ERBB2-217ENST00000584099 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-217ENST00000584099 KIF15Q9NS87 1388 aa20.2■□□□□ 0.82
ERBB2-217ENST00000584099 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-217ENST00000584099 ABCC3O15438 1527 aa20.18■□□□□ 0.82
ERBB2-217ENST00000584099 LTBP4Q8N2S1 1624 aa20.18■□□□□ 0.82
ERBB2-217ENST00000584099 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
ERBB2-217ENST00000584099 DAPK1P53355 1430 aa20.18■□□□□ 0.82
ERBB2-217ENST00000584099 PTPN23Q9H3S7 1636 aa20.17■□□□□ 0.82
ERBB2-217ENST00000584099 ZC3H13Q5T200 1668 aaKnown RBP20.17■□□□□ 0.82
ERBB2-217ENST00000584099 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
ERBB2-217ENST00000584099 DNMT1P26358 1616 aaKnown RBP20.16■□□□□ 0.82
ERBB2-217ENST00000584099 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
ERBB2-217ENST00000584099 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
ERBB2-217ENST00000584099 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
ERBB2-217ENST00000584099 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
ERBB2-217ENST00000584099 MROH1Q8NDA8 1641 aa20.12■□□□□ 0.81
ERBB2-217ENST00000584099 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
ERBB2-217ENST00000584099 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
ERBB2-217ENST00000584099 KANK1Q14678 1352 aa20.09■□□□□ 0.81
ERBB2-217ENST00000584099 UGGT1Q9NYU2 1555 aa20.09■□□□□ 0.81
ERBB2-217ENST00000584099 CROCC2H7BZ55 1655 aa20.09■□□□□ 0.81
ERBB2-217ENST00000584099 MED14O60244 1454 aa20.08■□□□□ 0.81
ERBB2-217ENST00000584099 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
ERBB2-217ENST00000584099 ZNF335Q9H4Z2 1342 aaPredicted RBP20.07■□□□□ 0.8
ERBB2-217ENST00000584099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
ERBB2-217ENST00000584099 LMTK2Q8IWU2 1503 aa20.05■□□□□ 0.8
ERBB2-217ENST00000584099 DEPDC5O75140 1603 aa20.04■□□□□ 0.8
ERBB2-217ENST00000584099 NEURL4Q96JN8 1562 aa20.02■□□□□ 0.8
ERBB2-217ENST00000584099 CPS1P31327 1500 aa20.02■□□□□ 0.79
ERBB2-217ENST00000584099 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.79
ERBB2-217ENST00000584099 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
ERBB2-217ENST00000584099 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
ERBB2-217ENST00000584099 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
ERBB2-217ENST00000584099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.79
ERBB2-217ENST00000584099 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
ERBB2-217ENST00000584099 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
ERBB2-217ENST00000584099 ROCK1Q13464 1354 aa19.97■□□□□ 0.79
ERBB2-217ENST00000584099 ARHGAP23Q9P227 1491 aa19.96■□□□□ 0.79
ERBB2-217ENST00000584099 SLIT1O75093 1534 aa19.96■□□□□ 0.79
ERBB2-217ENST00000584099 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
ERBB2-217ENST00000584099 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
ERBB2-217ENST00000584099 SCAF11Q99590 1463 aaKnown RBP19.94■□□□□ 0.78
ERBB2-217ENST00000584099 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
ERBB2-217ENST00000584099 NOS1P29475 1434 aa19.93■□□□□ 0.78
ERBB2-217ENST00000584099 CEP152O94986 1710 aa19.93■□□□□ 0.78
ERBB2-217ENST00000584099 EID1Q9Y6B2 187 aa19.93■□□□□ 0.78
ERBB2-217ENST00000584099 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
ERBB2-217ENST00000584099 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
ERBB2-217ENST00000584099 TOM1O60784 492 aa19.91■□□□□ 0.78
ERBB2-217ENST00000584099 TXNDC2Q86VQ3 553 aa19.9■□□□□ 0.78
ERBB2-217ENST00000584099 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
ERBB2-217ENST00000584099 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
ERBB2-217ENST00000584099 IDI1Q13907 227 aa19.89■□□□□ 0.77
ERBB2-217ENST00000584099 IQGAP1P46940 1657 aa19.88■□□□□ 0.77
ERBB2-217ENST00000584099 LTKP29376 864 aa19.88■□□□□ 0.77
ERBB2-217ENST00000584099 STAG3Q9UJ98 1225 aa19.88■□□□□ 0.77
ERBB2-217ENST00000584099 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
ERBB2-217ENST00000584099 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
ERBB2-217ENST00000584099 SYNMO15061 1565 aa19.82■□□□□ 0.76
ERBB2-217ENST00000584099 UNC13BO14795 1591 aa19.81■□□□□ 0.76
ERBB2-217ENST00000584099 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
ERBB2-217ENST00000584099 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
ERBB2-217ENST00000584099 TET3O43151 1660 aa19.79■□□□□ 0.76
ERBB2-217ENST00000584099 DISP3Q9P2K9 1392 aa19.77■□□□□ 0.76
ERBB2-217ENST00000584099 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
ERBB2-217ENST00000584099 NUP155O75694 1391 aa19.75■□□□□ 0.75
ERBB2-217ENST00000584099 KCNA6P17658 529 aa19.75■□□□□ 0.75
ERBB2-217ENST00000584099 CFAP65Q6ZU64 1925 aaKnown RBP19.74■□□□□ 0.75
ERBB2-217ENST00000584099 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
ERBB2-217ENST00000584099 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
ERBB2-217ENST00000584099 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
ERBB2-217ENST00000584099 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
ERBB2-217ENST00000584099 GCC2Q8IWJ2 1684 aa19.72■□□□□ 0.75
ERBB2-217ENST00000584099 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
ERBB2-217ENST00000584099 HSPA1LP34931 641 aa19.7■□□□□ 0.74
ERBB2-217ENST00000584099 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
ERBB2-217ENST00000584099 ITGAEP38570 1179 aa19.69■□□□□ 0.74
ERBB2-217ENST00000584099 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
ERBB2-217ENST00000584099 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
ERBB2-217ENST00000584099 NKTRP30414 1462 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms