RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
CDK5RAP3-230ENST00000584042 AGLP35573 1532 aa24.85■■□□□ 1.57
CDK5RAP3-230ENST00000584042 MROH1Q8NDA8 1641 aa24.84■■□□□ 1.57
CDK5RAP3-230ENST00000584042 IQGAP3Q86VI3 1631 aa24.83■■□□□ 1.57
CDK5RAP3-230ENST00000584042 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
CDK5RAP3-230ENST00000584042 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
CDK5RAP3-230ENST00000584042 SIGLEC1Q9BZZ2 1709 aa24.79■■□□□ 1.56
CDK5RAP3-230ENST00000584042 PZPP20742 1482 aa24.78■■□□□ 1.56
CDK5RAP3-230ENST00000584042 FAM135AQ9P2D6 1515 aa24.76■■□□□ 1.55
CDK5RAP3-230ENST00000584042 ZC3H13Q5T200 1668 aaKnown RBP24.74■■□□□ 1.55
CDK5RAP3-230ENST00000584042 NUP155O75694 1391 aa24.72■■□□□ 1.55
CDK5RAP3-230ENST00000584042 TRIM52Q96A61 297 aa24.72■■□□□ 1.55
CDK5RAP3-230ENST00000584042 TET3O43151 1660 aa24.72■■□□□ 1.55
CDK5RAP3-230ENST00000584042 LMTK2Q8IWU2 1503 aa24.71■■□□□ 1.55
CDK5RAP3-230ENST00000584042 KIF3BO15066 747 aa24.71■■□□□ 1.55
CDK5RAP3-230ENST00000584042 KANK1Q14678 1352 aa24.69■■□□□ 1.54
CDK5RAP3-230ENST00000584042 CEP152O94986 1710 aa24.69■■□□□ 1.54
CDK5RAP3-230ENST00000584042 ABCC3O15438 1527 aa24.66■■□□□ 1.54
CDK5RAP3-230ENST00000584042 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
CDK5RAP3-230ENST00000584042 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
CDK5RAP3-230ENST00000584042 CCER1Q8TC90 406 aaPredicted RBP24.64■■□□□ 1.54
CDK5RAP3-230ENST00000584042 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.54
CDK5RAP3-230ENST00000584042 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
CDK5RAP3-230ENST00000584042 SLC4A1APQ9BWU0 796 aaKnown RBP24.62■■□□□ 1.53
CDK5RAP3-230ENST00000584042 E9PCH4 1651 aa24.61■■□□□ 1.53
CDK5RAP3-230ENST00000584042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.6■■□□□ 1.531e-10■■■□□ 14.7
CDK5RAP3-230ENST00000584042 RPRD2Q5VT52 1461 aaKnown RBP24.57■■□□□ 1.52
CDK5RAP3-230ENST00000584042 GGT6Q6P531 493 aa24.56■■□□□ 1.52
CDK5RAP3-230ENST00000584042 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
CDK5RAP3-230ENST00000584042 CLTCQ00610 1675 aaKnown RBP24.55■■□□□ 1.52
CDK5RAP3-230ENST00000584042 SPHKAPQ2M3C7 1700 aa24.54■■□□□ 1.52
CDK5RAP3-230ENST00000584042 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
CDK5RAP3-230ENST00000584042 PKD2Q13563 968 aa24.53■■□□□ 1.52
CDK5RAP3-230ENST00000584042 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
CDK5RAP3-230ENST00000584042 FER1L4A9Z1Z3 1794 aa24.52■■□□□ 1.52
CDK5RAP3-230ENST00000584042 ANKRD30BQ9BXX2 1392 aa24.5■■□□□ 1.51
CDK5RAP3-230ENST00000584042 CNTLNQ9NXG0 1405 aa24.5■■□□□ 1.51
CDK5RAP3-230ENST00000584042 TRPM2O94759 1503 aa24.5■■□□□ 1.51
CDK5RAP3-230ENST00000584042 ARID4BQ4LE39 1312 aaPredicted RBP24.49■■□□□ 1.51
CDK5RAP3-230ENST00000584042 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
CDK5RAP3-230ENST00000584042 NPATQ14207 1427 aa24.49■■□□□ 1.51
CDK5RAP3-230ENST00000584042 PTPRTO14522 1441 aa24.45■■□□□ 1.51
CDK5RAP3-230ENST00000584042 ADAMTSL3P82987 1691 aa24.45■■□□□ 1.5
CDK5RAP3-230ENST00000584042 PREX1Q8TCU6 1659 aa24.44■■□□□ 1.5
CDK5RAP3-230ENST00000584042 PLA2R1Q13018 1463 aa24.44■■□□□ 1.5
CDK5RAP3-230ENST00000584042 FOXD1Q16676 465 aa24.43■■□□□ 1.5
CDK5RAP3-230ENST00000584042 MLECQ14165 292 aa24.42■■□□□ 1.5
CDK5RAP3-230ENST00000584042 MADDQ8WXG6 1647 aa24.42■■□□□ 1.5
CDK5RAP3-230ENST00000584042 NOS1P29475 1434 aa24.4■■□□□ 1.5
CDK5RAP3-230ENST00000584042 SPATA31D1Q6ZQQ2 1576 aa24.4■■□□□ 1.5
CDK5RAP3-230ENST00000584042 CLTCL1P53675 1640 aa24.39■■□□□ 1.49
CDK5RAP3-230ENST00000584042 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
CDK5RAP3-230ENST00000584042 CCDC144AA2RUR9 1427 aa24.38■■□□□ 1.49
CDK5RAP3-230ENST00000584042 SYNMO15061 1565 aa24.37■■□□□ 1.49
CDK5RAP3-230ENST00000584042 PIK3C2BO00750 1634 aa24.37■■□□□ 1.49
CDK5RAP3-230ENST00000584042 ZEB1P37275 1124 aaPredicted RBP24.36■■□□□ 1.49
CDK5RAP3-230ENST00000584042 ESF1Q9H501 851 aaKnown RBP24.36■■□□□ 1.49
CDK5RAP3-230ENST00000584042 C3P01024 1663 aa24.36■■□□□ 1.49
CDK5RAP3-230ENST00000584042 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
CDK5RAP3-230ENST00000584042 NEURL4Q96JN8 1562 aa24.34■■□□□ 1.49
CDK5RAP3-230ENST00000584042 SIN3AQ96ST3 1273 aa24.32■■□□□ 1.48
CDK5RAP3-230ENST00000584042 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
CDK5RAP3-230ENST00000584042 ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
CDK5RAP3-230ENST00000584042 UGGT1Q9NYU2 1555 aa24.3■■□□□ 1.48
CDK5RAP3-230ENST00000584042 KIF1BO60333 1816 aa24.29■■□□□ 1.48
CDK5RAP3-230ENST00000584042 ADGRB3O60242 1522 aa24.27■■□□□ 1.48
CDK5RAP3-230ENST00000584042 TIMELESSQ9UNS1 1208 aa24.27■■□□□ 1.48
CDK5RAP3-230ENST00000584042 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
CDK5RAP3-230ENST00000584042 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
CDK5RAP3-230ENST00000584042 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
CDK5RAP3-230ENST00000584042 KDM5AP29375 1690 aaKnown RBP24.21■■□□□ 1.47
CDK5RAP3-230ENST00000584042 TNRQ92752 1358 aa24.19■■□□□ 1.46
CDK5RAP3-230ENST00000584042 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
CDK5RAP3-230ENST00000584042 MYO3AQ8NEV4 1616 aa24.19■■□□□ 1.46
CDK5RAP3-230ENST00000584042 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
CDK5RAP3-230ENST00000584042 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
CDK5RAP3-230ENST00000584042 FBXO31Q5XUX0 539 aaPredicted RBP24.17■■□□□ 1.46
CDK5RAP3-230ENST00000584042 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
CDK5RAP3-230ENST00000584042 PTPRMP28827 1452 aa24.16■■□□□ 1.46
CDK5RAP3-230ENST00000584042 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
CDK5RAP3-230ENST00000584042 ZNF142P52746 1687 aaPredicted RBP24.13■■□□□ 1.45
CDK5RAP3-230ENST00000584042 PPLO60437 1756 aa24.11■■□□□ 1.45
CDK5RAP3-230ENST00000584042 UBR1Q8IWV7 1749 aa24.11■■□□□ 1.45
CDK5RAP3-230ENST00000584042 MYOM2P54296 1465 aa24.1■■□□□ 1.45
CDK5RAP3-230ENST00000584042 CEBPAP49715 358 aaPredicted RBP24.09■■□□□ 1.45
CDK5RAP3-230ENST00000584042 IDI1Q13907 227 aa24.09■■□□□ 1.45
CDK5RAP3-230ENST00000584042 L3MBTL2Q969R5 705 aa24.09■■□□□ 1.45
CDK5RAP3-230ENST00000584042 NEXMIFQ5QGS0 1516 aa24.08■■□□□ 1.45
CDK5RAP3-230ENST00000584042 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.44
CDK5RAP3-230ENST00000584042 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
CDK5RAP3-230ENST00000584042 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
CDK5RAP3-230ENST00000584042 SETD1BQ9UPS6 1966 aaKnown RBP24.05■■□□□ 1.44
CDK5RAP3-230ENST00000584042 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
CDK5RAP3-230ENST00000584042 STAC3Q96MF2 364 aa24.02■■□□□ 1.44
CDK5RAP3-230ENST00000584042 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
CDK5RAP3-230ENST00000584042 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
CDK5RAP3-230ENST00000584042 RGL3Q3MIN7 710 aa24.01■■□□□ 1.43
CDK5RAP3-230ENST00000584042 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
CDK5RAP3-230ENST00000584042 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
CDK5RAP3-230ENST00000584042 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms