RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
CASC3-208ENST00000583649 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
CASC3-208ENST00000583649 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
CASC3-208ENST00000583649 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
CASC3-208ENST00000583649 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
CASC3-208ENST00000583649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
CASC3-208ENST00000583649 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
CASC3-208ENST00000583649 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
CASC3-208ENST00000583649 KIF3BO15066 747 aa18.12■□□□□ 0.49
CASC3-208ENST00000583649 MED14O60244 1454 aa18.12■□□□□ 0.49
CASC3-208ENST00000583649 PZPP20742 1482 aa18.12■□□□□ 0.49
CASC3-208ENST00000583649 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
CASC3-208ENST00000583649 VWDEQ8N2E2 1590 aa18.12■□□□□ 0.49
CASC3-208ENST00000583649 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
CASC3-208ENST00000583649 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
CASC3-208ENST00000583649 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
CASC3-208ENST00000583649 UGGT1Q9NYU2 1555 aa18.1■□□□□ 0.49
CASC3-208ENST00000583649 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
CASC3-208ENST00000583649 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
CASC3-208ENST00000583649 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
CASC3-208ENST00000583649 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
CASC3-208ENST00000583649 SYNMO15061 1565 aa18.07■□□□□ 0.48
CASC3-208ENST00000583649 MTUS2Q5JR59 1369 aa18.06■□□□□ 0.48
CASC3-208ENST00000583649 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
CASC3-208ENST00000583649 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
CASC3-208ENST00000583649 IQGAP1P46940 1657 aa18.05■□□□□ 0.48
CASC3-208ENST00000583649 RGS17Q9UGC6 210 aaPredicted RBP18.04■□□□□ 0.48
CASC3-208ENST00000583649 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
CASC3-208ENST00000583649 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
CASC3-208ENST00000583649 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
CASC3-208ENST00000583649 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
CASC3-208ENST00000583649 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
CASC3-208ENST00000583649 MBD5Q9P267 1494 aa17.97■□□□□ 0.47
CASC3-208ENST00000583649 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
CASC3-208ENST00000583649 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
CASC3-208ENST00000583649 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
CASC3-208ENST00000583649 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
CASC3-208ENST00000583649 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
CASC3-208ENST00000583649 SCAF11Q99590 1463 aaKnown RBP17.93■□□□□ 0.46
CASC3-208ENST00000583649 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
CASC3-208ENST00000583649 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
CASC3-208ENST00000583649 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
CASC3-208ENST00000583649 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
CASC3-208ENST00000583649 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
CASC3-208ENST00000583649 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
CASC3-208ENST00000583649 ERVK-7P63135 1459 aa17.87■□□□□ 0.45
CASC3-208ENST00000583649 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
CASC3-208ENST00000583649 ABCC3O15438 1527 aa17.83■□□□□ 0.45
CASC3-208ENST00000583649 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.45
CASC3-208ENST00000583649 TMEM94Q12767 1356 aa17.83■□□□□ 0.45
CASC3-208ENST00000583649 JCADQ9P266 1359 aa17.83■□□□□ 0.45
CASC3-208ENST00000583649 LTKP29376 864 aa17.83■□□□□ 0.44
CASC3-208ENST00000583649 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.44
CASC3-208ENST00000583649 PROSER2Q86WR7 435 aaPredicted RBP17.83■□□□□ 0.44
CASC3-208ENST00000583649 KCNA6P17658 529 aa17.82■□□□□ 0.44
CASC3-208ENST00000583649 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
CASC3-208ENST00000583649 SLIT1O75093 1534 aa17.82■□□□□ 0.44
CASC3-208ENST00000583649 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
CASC3-208ENST00000583649 MSH6P52701 1360 aa17.8■□□□□ 0.44
CASC3-208ENST00000583649 ARHGAP23Q9P227 1491 aa17.8■□□□□ 0.44
CASC3-208ENST00000583649 UPF1Q92900 1129 aaKnown RBP eCLIP17.79■□□□□ 0.44
CASC3-208ENST00000583649 ROBO1Q9Y6N7 1651 aa17.79■□□□□ 0.44
CASC3-208ENST00000583649 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
CASC3-208ENST00000583649 BCANQ96GW7 911 aa17.77■□□□□ 0.44
CASC3-208ENST00000583649 SLAIN2Q9P270 581 aa17.77■□□□□ 0.44
CASC3-208ENST00000583649 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.43
CASC3-208ENST00000583649 EIF2AK4Q9P2K8 1649 aaKnown RBP17.76■□□□□ 0.43
CASC3-208ENST00000583649 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
CASC3-208ENST00000583649 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
CASC3-208ENST00000583649 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
CASC3-208ENST00000583649 FOXD1Q16676 465 aa17.74■□□□□ 0.43
CASC3-208ENST00000583649 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
CASC3-208ENST00000583649 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
CASC3-208ENST00000583649 ARHGAP31Q2M1Z3 1444 aa17.73■□□□□ 0.43
CASC3-208ENST00000583649 RXRBP28702 533 aa17.73■□□□□ 0.43
CASC3-208ENST00000583649 NKTRP30414 1462 aaKnown RBP17.72■□□□□ 0.43
CASC3-208ENST00000583649 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
CASC3-208ENST00000583649 PRDM15P57071 1507 aaPredicted RBP17.72■□□□□ 0.43
CASC3-208ENST00000583649 KANK1Q14678 1352 aa17.71■□□□□ 0.43
CASC3-208ENST00000583649 PHLPP1O60346 1717 aa17.71■□□□□ 0.43
CASC3-208ENST00000583649 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
CASC3-208ENST00000583649 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
CASC3-208ENST00000583649 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
CASC3-208ENST00000583649 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
CASC3-208ENST00000583649 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
CASC3-208ENST00000583649 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
CASC3-208ENST00000583649 RBM33Q96EV2 1170 aaKnown RBP17.68■□□□□ 0.42
CASC3-208ENST00000583649 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
CASC3-208ENST00000583649 CFAP65Q6ZU64 1925 aaKnown RBP17.67■□□□□ 0.42
CASC3-208ENST00000583649 CEP152O94986 1710 aa17.67■□□□□ 0.42
CASC3-208ENST00000583649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.421e-9■■□□□ 14.3
CASC3-208ENST00000583649 KDM5AP29375 1690 aaKnown RBP17.65■□□□□ 0.42
CASC3-208ENST00000583649 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
CASC3-208ENST00000583649 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
CASC3-208ENST00000583649 MROH1Q8NDA8 1641 aa17.64■□□□□ 0.41
CASC3-208ENST00000583649 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
CASC3-208ENST00000583649 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
CASC3-208ENST00000583649 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
CASC3-208ENST00000583649 ATF3P18847 181 aa17.63■□□□□ 0.41
CASC3-208ENST00000583649 IDI1Q13907 227 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms