RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
TSEN54-210ENST00000583634 SOCS7O14512 581 aa18.48■□□□□ 0.55
TSEN54-210ENST00000583634 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
TSEN54-210ENST00000583634 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
TSEN54-210ENST00000583634 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
TSEN54-210ENST00000583634 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
TSEN54-210ENST00000583634 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.55
TSEN54-210ENST00000583634 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
TSEN54-210ENST00000583634 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
TSEN54-210ENST00000583634 FBXO31Q5XUX0 539 aaPredicted RBP18.45■□□□□ 0.54
TSEN54-210ENST00000583634 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
TSEN54-210ENST00000583634 KIF3BO15066 747 aa18.44■□□□□ 0.54
TSEN54-210ENST00000583634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSEN54-210ENST00000583634 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
TSEN54-210ENST00000583634 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
TSEN54-210ENST00000583634 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
TSEN54-210ENST00000583634 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
TSEN54-210ENST00000583634 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
TSEN54-210ENST00000583634 TNRQ92752 1358 aa18.39■□□□□ 0.53
TSEN54-210ENST00000583634 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
TSEN54-210ENST00000583634 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
TSEN54-210ENST00000583634 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
TSEN54-210ENST00000583634 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
TSEN54-210ENST00000583634 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
TSEN54-210ENST00000583634 PZPP20742 1482 aa18.34■□□□□ 0.53
TSEN54-210ENST00000583634 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
TSEN54-210ENST00000583634 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
TSEN54-210ENST00000583634 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
TSEN54-210ENST00000583634 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
TSEN54-210ENST00000583634 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
TSEN54-210ENST00000583634 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
TSEN54-210ENST00000583634 ANKLE2Q86XL3 938 aa18.31■□□□□ 0.52
TSEN54-210ENST00000583634 HSPA1LP34931 641 aa18.3■□□□□ 0.52
TSEN54-210ENST00000583634 THEMISQ8N1K5 641 aaPredicted RBP18.3■□□□□ 0.52
TSEN54-210ENST00000583634 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
TSEN54-210ENST00000583634 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
TSEN54-210ENST00000583634 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
TSEN54-210ENST00000583634 TOM1O60784 492 aa18.27■□□□□ 0.52
TSEN54-210ENST00000583634 CPS1P31327 1500 aa18.27■□□□□ 0.51
TSEN54-210ENST00000583634 UGGT1Q9NYU2 1555 aa18.26■□□□□ 0.51
TSEN54-210ENST00000583634 ITGAEP38570 1179 aa18.26■□□□□ 0.51
TSEN54-210ENST00000583634 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
TSEN54-210ENST00000583634 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
TSEN54-210ENST00000583634 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
TSEN54-210ENST00000583634 DAPK1P53355 1430 aa18.23■□□□□ 0.51
TSEN54-210ENST00000583634 MED14O60244 1454 aa18.22■□□□□ 0.51
TSEN54-210ENST00000583634 ABCC3O15438 1527 aa18.22■□□□□ 0.51
TSEN54-210ENST00000583634 ABCC5O15440 1437 aa18.22■□□□□ 0.51
TSEN54-210ENST00000583634 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
TSEN54-210ENST00000583634 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
TSEN54-210ENST00000583634 RNF17Q9BXT8 1623 aaKnown RBP18.2■□□□□ 0.5
TSEN54-210ENST00000583634 CROCC2H7BZ55 1655 aa18.2■□□□□ 0.5
TSEN54-210ENST00000583634 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
TSEN54-210ENST00000583634 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
TSEN54-210ENST00000583634 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
TSEN54-210ENST00000583634 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
TSEN54-210ENST00000583634 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
TSEN54-210ENST00000583634 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
TSEN54-210ENST00000583634 STRCP1A6NGW2 1772 aa18.17■□□□□ 0.5
TSEN54-210ENST00000583634 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
TSEN54-210ENST00000583634 ZC3H13Q5T200 1668 aaKnown RBP18.16■□□□□ 0.5
TSEN54-210ENST00000583634 CEP152O94986 1710 aa18.15■□□□□ 0.5
TSEN54-210ENST00000583634 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
TSEN54-210ENST00000583634 EIF2AK4Q9P2K8 1649 aaKnown RBP18.15■□□□□ 0.5
TSEN54-210ENST00000583634 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
TSEN54-210ENST00000583634 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
TSEN54-210ENST00000583634 ADGRL2O95490 1459 aa18.13■□□□□ 0.49
TSEN54-210ENST00000583634 LTKP29376 864 aa18.12■□□□□ 0.49
TSEN54-210ENST00000583634 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
TSEN54-210ENST00000583634 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
TSEN54-210ENST00000583634 RRP7BPQ9NSQ0 103 aa18.11■□□□□ 0.49
TSEN54-210ENST00000583634 DUOX2Q9NRD8 1548 aa18.11■□□□□ 0.49
TSEN54-210ENST00000583634 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
TSEN54-210ENST00000583634 SETD5Q9C0A6 1442 aa18.1■□□□□ 0.49
TSEN54-210ENST00000583634 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
TSEN54-210ENST00000583634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
TSEN54-210ENST00000583634 KIF15Q9NS87 1388 aa18.09■□□□□ 0.49
TSEN54-210ENST00000583634 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
TSEN54-210ENST00000583634 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
TSEN54-210ENST00000583634 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.49
TSEN54-210ENST00000583634 HRCP23327 699 aa18.07■□□□□ 0.48
TSEN54-210ENST00000583634 NAIPQ13075 1403 aa18.06■□□□□ 0.48
TSEN54-210ENST00000583634 ARHGAP23Q9P227 1491 aa18.06■□□□□ 0.48
TSEN54-210ENST00000583634 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
TSEN54-210ENST00000583634 SYNMO15061 1565 aa18.05■□□□□ 0.48
TSEN54-210ENST00000583634 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
TSEN54-210ENST00000583634 SLIT1O75093 1534 aa18.04■□□□□ 0.48
TSEN54-210ENST00000583634 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
TSEN54-210ENST00000583634 EID1Q9Y6B2 187 aa18.04■□□□□ 0.48
TSEN54-210ENST00000583634 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
TSEN54-210ENST00000583634 RAB3GAP2Q9H2M9 1393 aa18.03■□□□□ 0.48
TSEN54-210ENST00000583634 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
TSEN54-210ENST00000583634 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
TSEN54-210ENST00000583634 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
TSEN54-210ENST00000583634 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
TSEN54-210ENST00000583634 IDI1Q13907 227 aa18■□□□□ 0.47
TSEN54-210ENST00000583634 KANK1Q14678 1352 aa17.99■□□□□ 0.47
TSEN54-210ENST00000583634 ANKRD50Q9ULJ7 1429 aa17.98■□□□□ 0.47
TSEN54-210ENST00000583634 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
TSEN54-210ENST00000583634 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms