RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 KIF3BO15066 747 aa23.78■■□□□ 1.4
CDK5RAP3-226ENST00000583182 FBXO31Q5XUX0 539 aaPredicted RBP23.78■■□□□ 1.4
CDK5RAP3-226ENST00000583182 CAMSAP2Q08AD1 1489 aa23.78■■□□□ 1.4
CDK5RAP3-226ENST00000583182 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
CDK5RAP3-226ENST00000583182 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
CDK5RAP3-226ENST00000583182 KDM5DQ9BY66 1539 aa23.76■■□□□ 1.39
CDK5RAP3-226ENST00000583182 TNRQ92752 1358 aa23.76■■□□□ 1.39
CDK5RAP3-226ENST00000583182 PZPP20742 1482 aa23.75■■□□□ 1.39
CDK5RAP3-226ENST00000583182 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
CDK5RAP3-226ENST00000583182 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
CDK5RAP3-226ENST00000583182 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
CDK5RAP3-226ENST00000583182 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
CDK5RAP3-226ENST00000583182 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
CDK5RAP3-226ENST00000583182 MIA2Q96PC5 1412 aa23.66■■□□□ 1.38
CDK5RAP3-226ENST00000583182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
CDK5RAP3-226ENST00000583182 CPS1P31327 1500 aa23.65■■□□□ 1.38
CDK5RAP3-226ENST00000583182 SHANK2Q9UPX8 1470 aa23.65■■□□□ 1.38
CDK5RAP3-226ENST00000583182 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
CDK5RAP3-226ENST00000583182 ANKLE2Q86XL3 938 aa23.63■■□□□ 1.37
CDK5RAP3-226ENST00000583182 UGGT1Q9NYU2 1555 aa23.63■■□□□ 1.37
CDK5RAP3-226ENST00000583182 VWDEQ8N2E2 1590 aa23.62■■□□□ 1.37
CDK5RAP3-226ENST00000583182 TSPY4P0CV99 314 aa23.62■■□□□ 1.37
CDK5RAP3-226ENST00000583182 TSPY10P0CW01 314 aa23.62■■□□□ 1.37
CDK5RAP3-226ENST00000583182 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
CDK5RAP3-226ENST00000583182 RNF17Q9BXT8 1623 aaKnown RBP23.61■■□□□ 1.37
CDK5RAP3-226ENST00000583182 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
CDK5RAP3-226ENST00000583182 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
CDK5RAP3-226ENST00000583182 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 HSPA1LP34931 641 aa23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 MED14O60244 1454 aa23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 MAST1Q9Y2H9 1570 aa23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 ABCC3O15438 1527 aa23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
CDK5RAP3-226ENST00000583182 TOM1O60784 492 aa23.57■■□□□ 1.36
CDK5RAP3-226ENST00000583182 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
CDK5RAP3-226ENST00000583182 IQGAP1P46940 1657 aa23.55■■□□□ 1.36
CDK5RAP3-226ENST00000583182 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
CDK5RAP3-226ENST00000583182 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
CDK5RAP3-226ENST00000583182 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
CDK5RAP3-226ENST00000583182 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
CDK5RAP3-226ENST00000583182 MED1Q15648 1581 aaPredicted RBP23.53■■□□□ 1.36
CDK5RAP3-226ENST00000583182 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
CDK5RAP3-226ENST00000583182 ERVK-7P63135 1459 aa23.52■■□□□ 1.36
CDK5RAP3-226ENST00000583182 CEP152O94986 1710 aa23.51■■□□□ 1.35
CDK5RAP3-226ENST00000583182 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
CDK5RAP3-226ENST00000583182 CFAP65Q6ZU64 1925 aaKnown RBP23.51■■□□□ 1.35
CDK5RAP3-226ENST00000583182 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
CDK5RAP3-226ENST00000583182 UBR1Q8IWV7 1749 aa23.47■■□□□ 1.35
CDK5RAP3-226ENST00000583182 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
CDK5RAP3-226ENST00000583182 MAP3K1Q13233 1512 aa23.46■■□□□ 1.35
CDK5RAP3-226ENST00000583182 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
CDK5RAP3-226ENST00000583182 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
CDK5RAP3-226ENST00000583182 SYNMO15061 1565 aa23.42■■□□□ 1.34
CDK5RAP3-226ENST00000583182 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
CDK5RAP3-226ENST00000583182 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.34
CDK5RAP3-226ENST00000583182 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
CDK5RAP3-226ENST00000583182 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
CDK5RAP3-226ENST00000583182 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
CDK5RAP3-226ENST00000583182 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
CDK5RAP3-226ENST00000583182 LTKP29376 864 aa23.37■■□□□ 1.33
CDK5RAP3-226ENST00000583182 SLIT1O75093 1534 aa23.37■■□□□ 1.33
CDK5RAP3-226ENST00000583182 ABCC5O15440 1437 aa23.36■■□□□ 1.33
CDK5RAP3-226ENST00000583182 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
CDK5RAP3-226ENST00000583182 ERBINQ96RT1 1412 aa23.34■■□□□ 1.33
CDK5RAP3-226ENST00000583182 TXNDC2Q86VQ3 553 aa23.34■■□□□ 1.33
CDK5RAP3-226ENST00000583182 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
CDK5RAP3-226ENST00000583182 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.33
CDK5RAP3-226ENST00000583182 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.33
CDK5RAP3-226ENST00000583182 PIK3C2BO00750 1634 aa23.33■■□□□ 1.32
CDK5RAP3-226ENST00000583182 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
CDK5RAP3-226ENST00000583182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.327e-9■■□□□ 13.5
CDK5RAP3-226ENST00000583182 DAPK1P53355 1430 aa23.29■■□□□ 1.32
CDK5RAP3-226ENST00000583182 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.31
CDK5RAP3-226ENST00000583182 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
CDK5RAP3-226ENST00000583182 KDM5AP29375 1690 aaKnown RBP23.24■■□□□ 1.31
CDK5RAP3-226ENST00000583182 KANK1Q14678 1352 aa23.24■■□□□ 1.31
CDK5RAP3-226ENST00000583182 FGD6Q6ZV73 1430 aa23.24■■□□□ 1.31
CDK5RAP3-226ENST00000583182 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
CDK5RAP3-226ENST00000583182 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
CDK5RAP3-226ENST00000583182 IDI1Q13907 227 aa23.22■■□□□ 1.31
CDK5RAP3-226ENST00000583182 STAG3Q9UJ98 1225 aa23.21■■□□□ 1.31
CDK5RAP3-226ENST00000583182 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
CDK5RAP3-226ENST00000583182 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
CDK5RAP3-226ENST00000583182 APLP2Q06481 763 aa23.19■■□□□ 1.3
CDK5RAP3-226ENST00000583182 TET3O43151 1660 aa23.19■■□□□ 1.3
CDK5RAP3-226ENST00000583182 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
CDK5RAP3-226ENST00000583182 RGS17Q9UGC6 210 aaPredicted RBP23.17■■□□□ 1.3
CDK5RAP3-226ENST00000583182 NOS1P29475 1434 aa23.16■■□□□ 1.3
CDK5RAP3-226ENST00000583182 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
CDK5RAP3-226ENST00000583182 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
CDK5RAP3-226ENST00000583182 ADGRB3O60242 1522 aa23.14■■□□□ 1.3
CDK5RAP3-226ENST00000583182 KCNA6P17658 529 aa23.14■■□□□ 1.29
CDK5RAP3-226ENST00000583182 RBM33Q96EV2 1170 aaKnown RBP23.12■■□□□ 1.29
CDK5RAP3-226ENST00000583182 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
CDK5RAP3-226ENST00000583182 ROBO1Q9Y6N7 1651 aa23.11■■□□□ 1.29
CDK5RAP3-226ENST00000583182 PROSER2Q86WR7 435 aaPredicted RBP23.1■■□□□ 1.29
CDK5RAP3-226ENST00000583182 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
CDK5RAP3-226ENST00000583182 SLC52A1Q9NWF4 448 aa23.08■■□□□ 1.29
CDK5RAP3-226ENST00000583182 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms