RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
TOP3A-214ENST00000582981 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-214ENST00000582981 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-214ENST00000582981 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
TOP3A-214ENST00000582981 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
TOP3A-214ENST00000582981 KIAA0556O60303 1618 aa13.88□□□□□ -0.19
TOP3A-214ENST00000582981 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
TOP3A-214ENST00000582981 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
TOP3A-214ENST00000582981 FRAT1Q92837 279 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-214ENST00000582981 KIF15Q9NS87 1388 aa13.88□□□□□ -0.19
TOP3A-214ENST00000582981 VSIG10Q8N0Z9 540 aa13.87□□□□□ -0.19
TOP3A-214ENST00000582981 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
TOP3A-214ENST00000582981 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
TOP3A-214ENST00000582981 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
TOP3A-214ENST00000582981 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
TOP3A-214ENST00000582981 RNF123Q5XPI4 1314 aa13.86□□□□□ -0.19
TOP3A-214ENST00000582981 MBD5Q9P267 1494 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 PDE4AP27815 886 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 PANK3Q9H999 370 aa13.85□□□□□ -0.19
TOP3A-214ENST00000582981 KDM5CP41229 1560 aa13.84□□□□□ -0.19
TOP3A-214ENST00000582981 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
TOP3A-214ENST00000582981 GRIN2AQ12879 1464 aa13.83□□□□□ -0.19
TOP3A-214ENST00000582981 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
TOP3A-214ENST00000582981 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
TOP3A-214ENST00000582981 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
TOP3A-214ENST00000582981 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
TOP3A-214ENST00000582981 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
TOP3A-214ENST00000582981 RALBP1Q15311 655 aa13.8□□□□□ -0.2
TOP3A-214ENST00000582981 LRPPRCP42704 1394 aaKnown RBP13.79□□□□□ -0.2
TOP3A-214ENST00000582981 CCDC146Q8IYE0 955 aa13.79□□□□□ -0.2
TOP3A-214ENST00000582981 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
TOP3A-214ENST00000582981 BRD4O60885 1362 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-214ENST00000582981 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
TOP3A-214ENST00000582981 ADAMTS8Q9UP79 889 aa13.78□□□□□ -0.2
TOP3A-214ENST00000582981 RGS3P49796 1198 aa13.77□□□□□ -0.2
TOP3A-214ENST00000582981 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-214ENST00000582981 CCDC144AA2RUR9 1427 aa13.76□□□□□ -0.21
TOP3A-214ENST00000582981 TCERG1O14776 1098 aaKnown RBP13.75□□□□□ -0.21
TOP3A-214ENST00000582981 ARXQ96QS3 562 aa13.75□□□□□ -0.21
TOP3A-214ENST00000582981 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
TOP3A-214ENST00000582981 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-214ENST00000582981 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
TOP3A-214ENST00000582981 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
TOP3A-214ENST00000582981 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
TOP3A-214ENST00000582981 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
TOP3A-214ENST00000582981 ATP10BO94823 1461 aa13.74□□□□□ -0.21
TOP3A-214ENST00000582981 TESK2Q96S53 571 aa13.73□□□□□ -0.21
TOP3A-214ENST00000582981 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-214ENST00000582981 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
TOP3A-214ENST00000582981 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
TOP3A-214ENST00000582981 ADGRL2O95490 1459 aa13.72□□□□□ -0.21
TOP3A-214ENST00000582981 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-214ENST00000582981 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
TOP3A-214ENST00000582981 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.21
TOP3A-214ENST00000582981 FRAT2O75474 233 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-214ENST00000582981 NAP1L5Q96NT1 182 aaPredicted RBP13.71□□□□□ -0.22
TOP3A-214ENST00000582981 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
TOP3A-214ENST00000582981 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
TOP3A-214ENST00000582981 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
TOP3A-214ENST00000582981 PRAG1Q86YV5 1406 aa13.7□□□□□ -0.22
TOP3A-214ENST00000582981 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-214ENST00000582981 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
TOP3A-214ENST00000582981 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
TOP3A-214ENST00000582981 TMF1P82094 1093 aa13.69□□□□□ -0.22
TOP3A-214ENST00000582981 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-214ENST00000582981 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
TOP3A-214ENST00000582981 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
TOP3A-214ENST00000582981 CDC42BPAQ5VT25 1732 aa13.68□□□□□ -0.22
TOP3A-214ENST00000582981 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
TOP3A-214ENST00000582981 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
TOP3A-214ENST00000582981 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
TOP3A-214ENST00000582981 A2MP01023 1474 aa13.67□□□□□ -0.22
TOP3A-214ENST00000582981 ABCC10Q5T3U5 1492 aa13.67□□□□□ -0.22
TOP3A-214ENST00000582981 HSP90AA2PQ14568 343 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-214ENST00000582981 PLA2R1Q13018 1463 aa13.66□□□□□ -0.22
TOP3A-214ENST00000582981 BCAR3O75815 825 aa13.66□□□□□ -0.22
TOP3A-214ENST00000582981 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 PTPRGP23470 1445 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 ERBINQ96RT1 1412 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 APAF1O14727 1248 aa13.65□□□□□ -0.22
TOP3A-214ENST00000582981 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
TOP3A-214ENST00000582981 RRAGDQ9NQL2 400 aaPredicted RBP13.64□□□□□ -0.23
TOP3A-214ENST00000582981 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
TOP3A-214ENST00000582981 SYCP2Q9BX26 1530 aa13.63□□□□□ -0.23
TOP3A-214ENST00000582981 DUSP27Q5VZP5 1158 aa13.63□□□□□ -0.23
TOP3A-214ENST00000582981 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
TOP3A-214ENST00000582981 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
TOP3A-214ENST00000582981 MS4A1P11836 297 aa13.62□□□□□ -0.23
TOP3A-214ENST00000582981 CCDC141Q6ZP82 1450 aa13.62□□□□□ -0.23
TOP3A-214ENST00000582981 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
TOP3A-214ENST00000582981 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
TOP3A-214ENST00000582981 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
TOP3A-214ENST00000582981 COL17A1Q9UMD9 1497 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-214ENST00000582981 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
TOP3A-214ENST00000582981 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms