RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 CCNB3Q8WWL7 1395 aa24.81■■□□□ 1.56
IFT20-212ENST00000582797 PHF23Q9BUL5 403 aaPredicted RBP24.81■■□□□ 1.56
IFT20-212ENST00000582797 TNRQ92752 1358 aa24.8■■□□□ 1.56
IFT20-212ENST00000582797 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
IFT20-212ENST00000582797 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
IFT20-212ENST00000582797 ZNF644Q9H582 1327 aaPredicted RBP24.78■■□□□ 1.56
IFT20-212ENST00000582797 TIAM1Q13009 1591 aa24.77■■□□□ 1.56
IFT20-212ENST00000582797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.77■■□□□ 1.56
IFT20-212ENST00000582797 PZPP20742 1482 aa24.77■■□□□ 1.56
IFT20-212ENST00000582797 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
IFT20-212ENST00000582797 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
IFT20-212ENST00000582797 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
IFT20-212ENST00000582797 DEPDC5O75140 1603 aa24.75■■□□□ 1.55
IFT20-212ENST00000582797 IQGAP1P46940 1657 aa24.75■■□□□ 1.55
IFT20-212ENST00000582797 DHX29Q7Z478 1369 aaKnown RBP24.72■■□□□ 1.55
IFT20-212ENST00000582797 UGGT1Q9NYU2 1555 aa24.71■■□□□ 1.55
IFT20-212ENST00000582797 NPHP4O75161 1426 aaPredicted RBP24.71■■□□□ 1.55
IFT20-212ENST00000582797 ANKLE2Q86XL3 938 aa24.71■■□□□ 1.55
IFT20-212ENST00000582797 MED14O60244 1454 aa24.7■■□□□ 1.55
IFT20-212ENST00000582797 RTEL1-TNFRSF6BF6WH68 1400 aa24.7■■□□□ 1.55
IFT20-212ENST00000582797 RNF17Q9BXT8 1623 aaKnown RBP24.7■■□□□ 1.54
IFT20-212ENST00000582797 MTUS2Q5JR59 1369 aa24.69■■□□□ 1.54
IFT20-212ENST00000582797 KIF3BO15066 747 aa24.69■■□□□ 1.54
IFT20-212ENST00000582797 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
IFT20-212ENST00000582797 NLRP1Q9C000 1473 aa24.67■■□□□ 1.54
IFT20-212ENST00000582797 SYNMO15061 1565 aa24.67■■□□□ 1.54
IFT20-212ENST00000582797 LRRC7Q96NW7 1537 aa24.66■■□□□ 1.54
IFT20-212ENST00000582797 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
IFT20-212ENST00000582797 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
IFT20-212ENST00000582797 MIA2Q96PC5 1412 aa24.65■■□□□ 1.54
IFT20-212ENST00000582797 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
IFT20-212ENST00000582797 EHBP1L1Q8N3D4 1523 aa24.63■■□□□ 1.53
IFT20-212ENST00000582797 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
IFT20-212ENST00000582797 CCDC141Q6ZP82 1450 aa24.61■■□□□ 1.53
IFT20-212ENST00000582797 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
IFT20-212ENST00000582797 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
IFT20-212ENST00000582797 CAMSAP2Q08AD1 1489 aa24.58■■□□□ 1.52
IFT20-212ENST00000582797 CFAP65Q6ZU64 1925 aaKnown RBP24.56■■□□□ 1.52
IFT20-212ENST00000582797 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
IFT20-212ENST00000582797 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
IFT20-212ENST00000582797 ABCC3O15438 1527 aa24.53■■□□□ 1.52
IFT20-212ENST00000582797 CEP152O94986 1710 aa24.51■■□□□ 1.51
IFT20-212ENST00000582797 ERVK-7P63135 1459 aa24.5■■□□□ 1.51
IFT20-212ENST00000582797 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
IFT20-212ENST00000582797 NCOA2Q15596 1464 aa24.47■■□□□ 1.51
IFT20-212ENST00000582797 MROH1Q8NDA8 1641 aa24.46■■□□□ 1.51
IFT20-212ENST00000582797 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.51
IFT20-212ENST00000582797 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
IFT20-212ENST00000582797 EIF2AK4Q9P2K8 1649 aaKnown RBP24.43■■□□□ 1.5
IFT20-212ENST00000582797 RSPH4AQ5TD94 716 aa24.41■■□□□ 1.5
IFT20-212ENST00000582797 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
IFT20-212ENST00000582797 ARHGAP23Q9P227 1491 aa24.39■■□□□ 1.5
IFT20-212ENST00000582797 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
IFT20-212ENST00000582797 LTKP29376 864 aa24.39■■□□□ 1.49
IFT20-212ENST00000582797 SLIT1O75093 1534 aa24.39■■□□□ 1.49
IFT20-212ENST00000582797 ROBO1Q9Y6N7 1651 aa24.38■■□□□ 1.49
IFT20-212ENST00000582797 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
IFT20-212ENST00000582797 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
IFT20-212ENST00000582797 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
IFT20-212ENST00000582797 FAM135BQ49AJ0 1406 aa24.35■■□□□ 1.49
IFT20-212ENST00000582797 TXNDC2Q86VQ3 553 aa24.34■■□□□ 1.49
IFT20-212ENST00000582797 MAP3K1Q13233 1512 aa24.3■■□□□ 1.48
IFT20-212ENST00000582797 TMEM94Q12767 1356 aa24.29■■□□□ 1.48
IFT20-212ENST00000582797 PRDM15P57071 1507 aaPredicted RBP24.25■■□□□ 1.47
IFT20-212ENST00000582797 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
IFT20-212ENST00000582797 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
IFT20-212ENST00000582797 RBM33Q96EV2 1170 aaKnown RBP24.24■■□□□ 1.47
IFT20-212ENST00000582797 DUOX2Q9NRD8 1548 aa24.24■■□□□ 1.47
IFT20-212ENST00000582797 ARHGAP31Q2M1Z3 1444 aa24.22■■□□□ 1.47
IFT20-212ENST00000582797 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
IFT20-212ENST00000582797 KDM5AP29375 1690 aaKnown RBP24.21■■□□□ 1.47
IFT20-212ENST00000582797 TET3O43151 1660 aa24.21■■□□□ 1.47
IFT20-212ENST00000582797 LRRC9Q6ZRR7 1453 aa24.2■■□□□ 1.47
IFT20-212ENST00000582797 EFCAB6Q5THR3 1501 aa24.2■■□□□ 1.46
IFT20-212ENST00000582797 NWD1Q149M9 1564 aa24.19■■□□□ 1.46
IFT20-212ENST00000582797 CROCC2H7BZ55 1655 aa24.18■■□□□ 1.46
IFT20-212ENST00000582797 KCNA6P17658 529 aa24.17■■□□□ 1.46
IFT20-212ENST00000582797 PROSER2Q86WR7 435 aaPredicted RBP24.17■■□□□ 1.46
IFT20-212ENST00000582797 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
IFT20-212ENST00000582797 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.46
IFT20-212ENST00000582797 STAG3Q9UJ98 1225 aa24.14■■□□□ 1.45
IFT20-212ENST00000582797 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
IFT20-212ENST00000582797 KIF15Q9NS87 1388 aa24.13■■□□□ 1.45
IFT20-212ENST00000582797 ERBINQ96RT1 1412 aa24.11■■□□□ 1.45
IFT20-212ENST00000582797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.11■■□□□ 1.453e-6■■□□□ 11.7
IFT20-212ENST00000582797 JCADQ9P266 1359 aa24.11■■□□□ 1.45
IFT20-212ENST00000582797 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
IFT20-212ENST00000582797 LRP6O75581 1613 aa24.1■■□□□ 1.45
IFT20-212ENST00000582797 MSH6P52701 1360 aa24.09■■□□□ 1.45
IFT20-212ENST00000582797 IDI1Q13907 227 aa24.09■■□□□ 1.45
IFT20-212ENST00000582797 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
IFT20-212ENST00000582797 ADGRB3O60242 1522 aa24.09■■□□□ 1.45
IFT20-212ENST00000582797 MYO5BQ9ULV0 1848 aa24.08■■□□□ 1.45
IFT20-212ENST00000582797 SLAIN2Q9P270 581 aa24.07■■□□□ 1.44
IFT20-212ENST00000582797 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
IFT20-212ENST00000582797 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
IFT20-212ENST00000582797 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
IFT20-212ENST00000582797 LMTK2Q8IWU2 1503 aa24.04■■□□□ 1.44
IFT20-212ENST00000582797 KANK1Q14678 1352 aa24.03■■□□□ 1.44
IFT20-212ENST00000582797 ABCC5O15440 1437 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms