RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	CTTNBP2	Q8WZ74	1663 aa		9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	NUTM2E	B1AL46	878 aa	Predicted RBP	9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	RBM6	P78332	1123 aa	Known RBP	9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	MLH3	Q9UHC1	1453 aa		9.52	□□□□□ -0.89
MSI2-216	ENST00000582772	ITSN2	Q9NZM3	1697 aa		9.51	□□□□□ -0.89
MSI2-216	ENST00000582772	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.51	□□□□□ -0.89
MSI2-216	ENST00000582772	HRC	P23327	699 aa		9.5	□□□□□ -0.89
MSI2-216	ENST00000582772	ABCC1	P33527	1531 aa		9.5	□□□□□ -0.89
MSI2-216	ENST00000582772	MEX3C	Q5U5Q3	659 aa	Known RBP	9.49	□□□□□ -0.89
MSI2-216	ENST00000582772	PLCH2	O75038	1416 aa		9.48	□□□□□ -0.89
MSI2-216	ENST00000582772	ATP7A	Q04656	1500 aa		9.47	□□□□□ -0.89
MSI2-216	ENST00000582772	MAP3K1	Q13233	1512 aa		9.47	□□□□□ -0.89
MSI2-216	ENST00000582772	ANKLE2	Q86XL3	938 aa		9.47	□□□□□ -0.89
MSI2-216	ENST00000582772	BLM	P54132	1417 aa	Predicted RBP	9.46	□□□□□ -0.9
MSI2-216	ENST00000582772	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.45	□□□□□ -0.9
MSI2-216	ENST00000582772	AFF2	P51816	1311 aa		9.45	□□□□□ -0.9
MSI2-216	ENST00000582772	DIP2A	Q14689	1571 aa		9.45	□□□□□ -0.9
MSI2-216	ENST00000582772	MYO5C	Q9NQX4	1742 aa		9.44	□□□□□ -0.9
MSI2-216	ENST00000582772	KIDINS220	Q9ULH0	1771 aa		9.44	□□□□□ -0.9
MSI2-216	ENST00000582772	CHD4	Q14839	1912 aa		9.44	□□□□□ -0.9
MSI2-216	ENST00000582772	SCAF11	Q99590	1463 aa	Known RBP	9.43	□□□□□ -0.9
MSI2-216	ENST00000582772	NGLY1	Q96IV0	654 aa		9.43	□□□□□ -0.9
MSI2-216	ENST00000582772	TIAM1	Q13009	1591 aa		9.42	□□□□□ -0.9
MSI2-216	ENST00000582772	ABCC3	O15438	1527 aa		9.42	□□□□□ -0.9
MSI2-216	ENST00000582772	UNC13B	O14795	1591 aa		9.41	□□□□□ -0.9
MSI2-216	ENST00000582772	NUP153	P49790	1475 aa	Known RBP	9.41	□□□□□ -0.9
MSI2-216	ENST00000582772	SPHKAP	Q2M3C7	1700 aa		9.41	□□□□□ -0.9
MSI2-216	ENST00000582772	ADGB	Q8N7X0	1667 aa		9.4	□□□□□ -0.9
MSI2-216	ENST00000582772	QTRT2	Q9H974	415 aa	Known RBP	9.4	□□□□□ -0.9
MSI2-216	ENST00000582772	PLXNC1	O60486	1568 aa		9.4	□□□□□ -0.9
MSI2-216	ENST00000582772	UGGT1	Q9NYU2	1555 aa		9.4	□□□□□ -0.9
MSI2-216	ENST00000582772	ARID3C	A6NKF2	412 aa		9.39	□□□□□ -0.91
MSI2-216	ENST00000582772	PRELP	P51888	382 aa		9.39	□□□□□ -0.91
MSI2-216	ENST00000582772	FAM135A	Q9P2D6	1515 aa		9.39	□□□□□ -0.91
MSI2-216	ENST00000582772	NLRP1	Q9C000	1473 aa		9.39	□□□□□ -0.91
MSI2-216	ENST00000582772	RTEL1-TNFRSF6B	F6WH68	1400 aa		9.38	□□□□□ -0.91
MSI2-216	ENST00000582772	TMEM94	Q12767	1356 aa		9.37	□□□□□ -0.91
MSI2-216	ENST00000582772	CAMTA1	Q9Y6Y1	1673 aa		9.36	□□□□□ -0.91
MSI2-216	ENST00000582772	ARHGAP23	Q9P227	1491 aa		9.36	□□□□□ -0.91
MSI2-216	ENST00000582772	THEMIS	Q8N1K5	641 aa	Predicted RBP	9.36	□□□□□ -0.91
MSI2-216	ENST00000582772	AFAP1	Q8N556	730 aa		9.36	□□□□□ -0.91
MSI2-216	ENST00000582772	NINL	Q9Y2I6	1382 aa		9.36	□□□□□ -0.91
MSI2-216	ENST00000582772	KDM5A	P29375	1690 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-216	ENST00000582772	TNR	Q92752	1358 aa		9.35	□□□□□ -0.91
MSI2-216	ENST00000582772	PSD	A5PKW4	1024 aa	Predicted RBP	9.34	□□□□□ -0.91
MSI2-216	ENST00000582772	PRDM15	P57071	1507 aa	Predicted RBP	9.34	□□□□□ -0.91
MSI2-216	ENST00000582772	DCAF8L1	A6NGE4	600 aa		9.33	□□□□□ -0.92
MSI2-216	ENST00000582772	EFCAB2	Q5VUJ9	269 aa		9.33	□□□□□ -0.92
MSI2-216	ENST00000582772	SAMD9	Q5K651	1589 aa		9.33	□□□□□ -0.92
MSI2-216	ENST00000582772	PLEKHD1	A6NEE1	506 aa		9.32	□□□□□ -0.92
MSI2-216	ENST00000582772	DEFB132	Q7Z7B7	95 aa		9.32	□□□□□ -0.92
MSI2-216	ENST00000582772	FAM9A	Q8IZU1	332 aa	Predicted RBP	9.32	□□□□□ -0.92
MSI2-216	ENST00000582772	PZP	P20742	1482 aa		9.32	□□□□□ -0.92
MSI2-216	ENST00000582772	NKTR	P30414	1462 aa	Known RBP	9.32	□□□□□ -0.92
MSI2-216	ENST00000582772	SLAIN2	Q9P270	581 aa		9.31	□□□□□ -0.92
MSI2-216	ENST00000582772	ATRN	O75882	1429 aa		9.31	□□□□□ -0.92
MSI2-216	ENST00000582772	RALGAPB	Q86X10	1494 aa		9.29	□□□□□ -0.92
MSI2-216	ENST00000582772	GIGYF1	O75420	1035 aa	Predicted RBP	9.29	□□□□□ -0.92
MSI2-216	ENST00000582772	SETD5	Q9C0A6	1442 aa		9.29	□□□□□ -0.92
MSI2-216	ENST00000582772	MSH6	P52701	1360 aa		9.27	□□□□□ -0.93
MSI2-216	ENST00000582772	BRWD3	Q6RI45	1802 aa		9.27	□□□□□ -0.93
MSI2-216	ENST00000582772	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.27	□□□□□ -0.93
MSI2-216	ENST00000582772	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.27	□□□□□ -0.93
MSI2-216	ENST00000582772	UBR1	Q8IWV7	1749 aa		9.26	□□□□□ -0.93
MSI2-216	ENST00000582772	CAPN15	O75808	1086 aa		9.26	□□□□□ -0.93
MSI2-216	ENST00000582772	TRPC5	Q9UL62	973 aa	Predicted RBP	9.26	□□□□□ -0.93
MSI2-216	ENST00000582772	SLIT1	O75093	1534 aa		9.26	□□□□□ -0.93
MSI2-216	ENST00000582772	ARHGAP5	Q13017	1502 aa		9.26	□□□□□ -0.93
MSI2-216	ENST00000582772	CDC42BPB	Q9Y5S2	1711 aa		9.25	□□□□□ -0.93
MSI2-216	ENST00000582772	MIA2	Q96PC5	1412 aa		9.25	□□□□□ -0.93
MSI2-216	ENST00000582772	MROH1	Q8NDA8	1641 aa		9.25	□□□□□ -0.93
MSI2-216	ENST00000582772	C8orf37	Q96NL8	207 aa		9.25	□□□□□ -0.93
MSI2-216	ENST00000582772	MYT1L	Q9UL68	1186 aa		9.24	□□□□□ -0.93
MSI2-216	ENST00000582772	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.24	□□□□□ -0.93
MSI2-216	ENST00000582772	SAMD9L	Q8IVG5	1584 aa		9.24	□□□□□ -0.93
MSI2-216	ENST00000582772	PCNT	O95613	3336 aa		9.23	□□□□□ -0.93
MSI2-216	ENST00000582772	SF3B2	Q13435	895 aa	Known RBP	9.23	□□□□□ -0.93
MSI2-216	ENST00000582772	MAST1	Q9Y2H9	1570 aa		9.23	□□□□□ -0.93
MSI2-216	ENST00000582772	INO80	Q9ULG1	1556 aa	Predicted RBP	9.22	□□□□□ -0.93
MSI2-216	ENST00000582772	RGPD1	P0DJD0	1748 aa		9.22	□□□□□ -0.93
MSI2-216	ENST00000582772	R3HDM1	Q15032	1099 aa	Known RBP	9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	SHANK3	Q9BYB0	1731 aa		9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	DISP2	A7MBM2	1401 aa		9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	A2M	P01023	1474 aa		9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	NCOA2	Q15596	1464 aa		9.21	□□□□□ -0.94
MSI2-216	ENST00000582772	PREX2	Q70Z35	1606 aa		9.2	□□□□□ -0.94
MSI2-216	ENST00000582772	KCNA6	P17658	529 aa		9.2	□□□□□ -0.94
MSI2-216	ENST00000582772	NCOA3	Q9Y6Q9	1424 aa		9.2	□□□□□ -0.94
MSI2-216	ENST00000582772	GPATCH8	Q9UKJ3	1502 aa	Known RBP	9.2	□□□□□ -0.94
MSI2-216	ENST00000582772	HSPA6	P17066	643 aa		9.19	□□□□□ -0.94
MSI2-216	ENST00000582772	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.19	□□□□□ -0.94
MSI2-216	ENST00000582772	USP21	Q9UK80	565 aa		9.19	□□□□□ -0.94
MSI2-216	ENST00000582772	GOLGB1	Q14789	3259 aa	Known RBP	9.18	□□□□□ -0.94
MSI2-216	ENST00000582772	BAG6	P46379	1132 aa		9.18	□□□□□ -0.94
MSI2-216	ENST00000582772	CAMSAP2	Q08AD1	1489 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms