RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
CACNB1-210ENST00000582544 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
CACNB1-210ENST00000582544 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
CACNB1-210ENST00000582544 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
CACNB1-210ENST00000582544 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
CACNB1-210ENST00000582544 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
CACNB1-210ENST00000582544 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
CACNB1-210ENST00000582544 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
CACNB1-210ENST00000582544 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
CACNB1-210ENST00000582544 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
CACNB1-210ENST00000582544 KDM5DQ9BY66 1539 aa12.66□□□□□ -0.38
CACNB1-210ENST00000582544 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
CACNB1-210ENST00000582544 A2ML1A8K2U0 1454 aa12.65□□□□□ -0.38
CACNB1-210ENST00000582544 PZPP20742 1482 aa12.65□□□□□ -0.38
CACNB1-210ENST00000582544 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
CACNB1-210ENST00000582544 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
CACNB1-210ENST00000582544 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
CACNB1-210ENST00000582544 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
CACNB1-210ENST00000582544 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
CACNB1-210ENST00000582544 GGT6Q6P531 493 aa12.61□□□□□ -0.39
CACNB1-210ENST00000582544 CEP152O94986 1710 aa12.6□□□□□ -0.39
CACNB1-210ENST00000582544 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
CACNB1-210ENST00000582544 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
CACNB1-210ENST00000582544 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
CACNB1-210ENST00000582544 ABCC3O15438 1527 aa12.59□□□□□ -0.39
CACNB1-210ENST00000582544 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
CACNB1-210ENST00000582544 PKD2Q13563 968 aa12.59□□□□□ -0.39
CACNB1-210ENST00000582544 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
CACNB1-210ENST00000582544 MIA2Q96PC5 1412 aa12.58□□□□□ -0.4
CACNB1-210ENST00000582544 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
CACNB1-210ENST00000582544 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
CACNB1-210ENST00000582544 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
CACNB1-210ENST00000582544 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
CACNB1-210ENST00000582544 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
CACNB1-210ENST00000582544 TNRQ92752 1358 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 KIF3BO15066 747 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
CACNB1-210ENST00000582544 MED14O60244 1454 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 NLRP1Q9C000 1473 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 UBR1Q8IWV7 1749 aa12.56□□□□□ -0.4
CACNB1-210ENST00000582544 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
CACNB1-210ENST00000582544 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
CACNB1-210ENST00000582544 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-210ENST00000582544 PRDM15P57071 1507 aaPredicted RBP12.55□□□□□ -0.4
CACNB1-210ENST00000582544 SHANK2Q9UPX8 1470 aa12.54□□□□□ -0.4
CACNB1-210ENST00000582544 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CACNB1-210ENST00000582544 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
CACNB1-210ENST00000582544 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
CACNB1-210ENST00000582544 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
CACNB1-210ENST00000582544 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
CACNB1-210ENST00000582544 ERVK-7P63135 1459 aa12.53□□□□□ -0.4
CACNB1-210ENST00000582544 CPS1P31327 1500 aa12.51□□□□□ -0.41
CACNB1-210ENST00000582544 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
CACNB1-210ENST00000582544 ABCC5O15440 1437 aa12.5□□□□□ -0.41
CACNB1-210ENST00000582544 XIRP1Q702N8 1843 aaKnown RBP12.5□□□□□ -0.41
CACNB1-210ENST00000582544 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
CACNB1-210ENST00000582544 ARHGAP31Q2M1Z3 1444 aa12.49□□□□□ -0.41
CACNB1-210ENST00000582544 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
CACNB1-210ENST00000582544 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
CACNB1-210ENST00000582544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNB1-210ENST00000582544 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
CACNB1-210ENST00000582544 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
CACNB1-210ENST00000582544 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CACNB1-210ENST00000582544 SLIT1O75093 1534 aa12.47□□□□□ -0.41
CACNB1-210ENST00000582544 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
CACNB1-210ENST00000582544 SYNMO15061 1565 aa12.47□□□□□ -0.41
CACNB1-210ENST00000582544 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.41
CACNB1-210ENST00000582544 DAPK1P53355 1430 aa12.46□□□□□ -0.41
CACNB1-210ENST00000582544 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.41
CACNB1-210ENST00000582544 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
CACNB1-210ENST00000582544 LMTK2Q8IWU2 1503 aa12.46□□□□□ -0.42
CACNB1-210ENST00000582544 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
CACNB1-210ENST00000582544 DISP3Q9P2K9 1392 aa12.44□□□□□ -0.42
CACNB1-210ENST00000582544 ADGRL2O95490 1459 aa12.43□□□□□ -0.42
CACNB1-210ENST00000582544 THEMISQ8N1K5 641 aaPredicted RBP12.43□□□□□ -0.42
CACNB1-210ENST00000582544 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
CACNB1-210ENST00000582544 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
CACNB1-210ENST00000582544 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
CACNB1-210ENST00000582544 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
CACNB1-210ENST00000582544 EFCAB6Q5THR3 1501 aa12.41□□□□□ -0.42
CACNB1-210ENST00000582544 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.42
CACNB1-210ENST00000582544 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
CACNB1-210ENST00000582544 TET3O43151 1660 aa12.38□□□□□ -0.43
CACNB1-210ENST00000582544 NOS1P29475 1434 aa12.38□□□□□ -0.43
CACNB1-210ENST00000582544 SOCS7O14512 581 aa12.37□□□□□ -0.43
CACNB1-210ENST00000582544 LTKP29376 864 aa12.37□□□□□ -0.43
CACNB1-210ENST00000582544 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
CACNB1-210ENST00000582544 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
CACNB1-210ENST00000582544 UNC13BO14795 1591 aa12.35□□□□□ -0.43
CACNB1-210ENST00000582544 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
CACNB1-210ENST00000582544 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
CACNB1-210ENST00000582544 ANKRD30AQ9BXX3 1397 aa12.34□□□□□ -0.43
CACNB1-210ENST00000582544 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
CACNB1-210ENST00000582544 HSPA1LP34931 641 aa12.34□□□□□ -0.43
CACNB1-210ENST00000582544 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
CACNB1-210ENST00000582544 CHD2O14647 1828 aaKnown RBP12.33□□□□□ -0.44
CACNB1-210ENST00000582544 E9PCH4 1651 aa12.32□□□□□ -0.44
CACNB1-210ENST00000582544 TOM1O60784 492 aa12.32□□□□□ -0.44
CACNB1-210ENST00000582544 TMEM131LA2VDJ0 1609 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms