RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
GGA3-212ENST00000582376 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
GGA3-212ENST00000582376 SYNMO15061 1565 aa15.39■□□□□ 0.05
GGA3-212ENST00000582376 INO80Q9ULG1 1556 aaPredicted RBP15.39■□□□□ 0.05
GGA3-212ENST00000582376 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
GGA3-212ENST00000582376 FAM135AQ9P2D6 1515 aa15.37■□□□□ 0.05
GGA3-212ENST00000582376 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
GGA3-212ENST00000582376 IQGAP1P46940 1657 aa15.36■□□□□ 0.05
GGA3-212ENST00000582376 KIAA1107Q9UPP5 1409 aa15.35■□□□□ 0.05
GGA3-212ENST00000582376 PZPP20742 1482 aa15.35■□□□□ 0.05
GGA3-212ENST00000582376 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
GGA3-212ENST00000582376 UGGT1Q9NYU2 1555 aa15.35■□□□□ 0.05
GGA3-212ENST00000582376 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
GGA3-212ENST00000582376 SETD1AO15047 1707 aaKnown RBP15.34■□□□□ 0.05
GGA3-212ENST00000582376 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
GGA3-212ENST00000582376 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
GGA3-212ENST00000582376 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
GGA3-212ENST00000582376 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
GGA3-212ENST00000582376 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
GGA3-212ENST00000582376 FAM135BQ49AJ0 1406 aa15.31■□□□□ 0.04
GGA3-212ENST00000582376 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
GGA3-212ENST00000582376 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
GGA3-212ENST00000582376 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
GGA3-212ENST00000582376 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
GGA3-212ENST00000582376 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
GGA3-212ENST00000582376 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
GGA3-212ENST00000582376 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
GGA3-212ENST00000582376 KIF3BO15066 747 aa15.27■□□□□ 0.04
GGA3-212ENST00000582376 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
GGA3-212ENST00000582376 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
GGA3-212ENST00000582376 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
GGA3-212ENST00000582376 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
GGA3-212ENST00000582376 ROBO1Q9Y6N7 1651 aa15.2■□□□□ 0.02
GGA3-212ENST00000582376 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
GGA3-212ENST00000582376 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
GGA3-212ENST00000582376 MBD5Q9P267 1494 aa15.19■□□□□ 0.02
GGA3-212ENST00000582376 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
GGA3-212ENST00000582376 JCADQ9P266 1359 aa15.18■□□□□ 0.02
GGA3-212ENST00000582376 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
GGA3-212ENST00000582376 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
GGA3-212ENST00000582376 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
GGA3-212ENST00000582376 LTKP29376 864 aa15.16■□□□□ 0.02
GGA3-212ENST00000582376 ZNF772Q68DY9 489 aaPredicted RBP15.16■□□□□ 0.02
GGA3-212ENST00000582376 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
GGA3-212ENST00000582376 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
GGA3-212ENST00000582376 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
GGA3-212ENST00000582376 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
GGA3-212ENST00000582376 UBR1Q8IWV7 1749 aa15.13■□□□□ 0.01
GGA3-212ENST00000582376 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
GGA3-212ENST00000582376 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
GGA3-212ENST00000582376 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
GGA3-212ENST00000582376 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
GGA3-212ENST00000582376 SLIT1O75093 1534 aa15.12■□□□□ 0.01
GGA3-212ENST00000582376 RXRBP28702 533 aa15.11■□□□□ 0.01
GGA3-212ENST00000582376 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
GGA3-212ENST00000582376 ABCC3O15438 1527 aa15.11■□□□□ 0.01
GGA3-212ENST00000582376 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
GGA3-212ENST00000582376 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
GGA3-212ENST00000582376 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
GGA3-212ENST00000582376 KCNA6P17658 529 aa15.1■□□□□ 0.01
GGA3-212ENST00000582376 SPATA31A6Q5VVP1 1343 aa15.1■□□□□ 0.01
GGA3-212ENST00000582376 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
GGA3-212ENST00000582376 LRP6O75581 1613 aa15.09■□□□□ 0.01
GGA3-212ENST00000582376 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
GGA3-212ENST00000582376 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
GGA3-212ENST00000582376 SLAIN2Q9P270 581 aa15.08■□□□□ 0
GGA3-212ENST00000582376 MSH6P52701 1360 aa15.08■□□□□ 0
GGA3-212ENST00000582376 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
GGA3-212ENST00000582376 FGD6Q6ZV73 1430 aa15.06■□□□□ 0
GGA3-212ENST00000582376 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
GGA3-212ENST00000582376 COL16A1Q07092 1604 aaPredicted RBP15.05■□□□□ -0
GGA3-212ENST00000582376 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
GGA3-212ENST00000582376 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
GGA3-212ENST00000582376 CFAP65Q6ZU64 1925 aaKnown RBP15.02■□□□□ -0
GGA3-212ENST00000582376 TSPY4P0CV99 314 aa15.02■□□□□ -0
GGA3-212ENST00000582376 TSPY10P0CW01 314 aa15.02■□□□□ -0
GGA3-212ENST00000582376 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
GGA3-212ENST00000582376 SLC26A8Q96RN1 970 aa15.01□□□□□ -0.01
GGA3-212ENST00000582376 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
GGA3-212ENST00000582376 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
GGA3-212ENST00000582376 CEP162Q5TB80 1403 aa15□□□□□ -0.01
GGA3-212ENST00000582376 NWD1Q149M9 1564 aa14.99□□□□□ -0.01
GGA3-212ENST00000582376 FOXD1Q16676 465 aa14.99□□□□□ -0.01
GGA3-212ENST00000582376 CEP152O94986 1710 aa14.99□□□□□ -0.01
GGA3-212ENST00000582376 MROH1Q8NDA8 1641 aa14.98□□□□□ -0.01
GGA3-212ENST00000582376 EIF2AK4Q9P2K8 1649 aaKnown RBP14.98□□□□□ -0.01
GGA3-212ENST00000582376 TET3O43151 1660 aa14.97□□□□□ -0.01
GGA3-212ENST00000582376 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
GGA3-212ENST00000582376 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
GGA3-212ENST00000582376 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
GGA3-212ENST00000582376 AFF2P51816 1311 aa14.96□□□□□ -0.01
GGA3-212ENST00000582376 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
GGA3-212ENST00000582376 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
GGA3-212ENST00000582376 RGS12O14924 1447 aa14.96□□□□□ -0.01
GGA3-212ENST00000582376 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
GGA3-212ENST00000582376 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
GGA3-212ENST00000582376 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
GGA3-212ENST00000582376 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.01
GGA3-212ENST00000582376 EFCAB6Q5THR3 1501 aa14.95□□□□□ -0.02
GGA3-212ENST00000582376 AHDC1Q5TGY3 1603 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms