RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.42
TOP3A-213ENST00000582230 CNTLNQ9NXG0 1405 aa30.14■■■□□ 2.42
TOP3A-213ENST00000582230 AEBP2Q6ZN18 517 aaPredicted RBP30.12■■■□□ 2.41
TOP3A-213ENST00000582230 FAM135AQ9P2D6 1515 aa30.12■■■□□ 2.41
TOP3A-213ENST00000582230 WASHC2CQ9Y4E1 1318 aa30.11■■■□□ 2.41
TOP3A-213ENST00000582230 FER1L4A9Z1Z3 1794 aa30.09■■■□□ 2.41
TOP3A-213ENST00000582230 KANK1Q14678 1352 aa30.09■■■□□ 2.41
TOP3A-213ENST00000582230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.08■■■□□ 2.41
TOP3A-213ENST00000582230 PTPRMP28827 1452 aa30.07■■■□□ 2.4
TOP3A-213ENST00000582230 DEPDC5O75140 1603 aa30.07■■■□□ 2.4
TOP3A-213ENST00000582230 PRDM15P57071 1507 aaPredicted RBP30.06■■■□□ 2.4
TOP3A-213ENST00000582230 GCC2Q8IWJ2 1684 aa30.06■■■□□ 2.4
TOP3A-213ENST00000582230 MROH1Q8NDA8 1641 aa30.06■■■□□ 2.4
TOP3A-213ENST00000582230 KDM5DQ9BY66 1539 aa30.06■■■□□ 2.4
TOP3A-213ENST00000582230 RIMS1Q86UR5 1692 aaKnown RBP30.05■■■□□ 2.4
TOP3A-213ENST00000582230 TRIM26Q12899 539 aaPredicted RBP30.05■■■□□ 2.4
TOP3A-213ENST00000582230 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
TOP3A-213ENST00000582230 ABCC3O15438 1527 aa30■■■□□ 2.39
TOP3A-213ENST00000582230 SETD5Q9C0A6 1442 aa29.99■■■□□ 2.39
TOP3A-213ENST00000582230 UNC13BO14795 1591 aa29.98■■■□□ 2.39
TOP3A-213ENST00000582230 MROH2AA6NES4 1674 aa29.98■■■□□ 2.39
TOP3A-213ENST00000582230 CLTCQ00610 1675 aaKnown RBP29.98■■■□□ 2.39
TOP3A-213ENST00000582230 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
TOP3A-213ENST00000582230 ZC3H13Q5T200 1668 aaKnown RBP29.98■■■□□ 2.39
TOP3A-213ENST00000582230 ACIN1Q9UKV3 1341 aaKnown RBP29.97■■■□□ 2.39
TOP3A-213ENST00000582230 NUP155O75694 1391 aa29.96■■■□□ 2.39
TOP3A-213ENST00000582230 CEBPAP49715 358 aaPredicted RBP29.96■■■□□ 2.39
TOP3A-213ENST00000582230 PLPPR3Q6T4P5 718 aa29.94■■■□□ 2.38
TOP3A-213ENST00000582230 LMTK2Q8IWU2 1503 aa29.94■■■□□ 2.38
TOP3A-213ENST00000582230 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
TOP3A-213ENST00000582230 ARHGAP31Q2M1Z3 1444 aa29.89■■■□□ 2.38
TOP3A-213ENST00000582230 C3P01024 1663 aa29.89■■■□□ 2.38
TOP3A-213ENST00000582230 PZPP20742 1482 aa29.88■■■□□ 2.37
TOP3A-213ENST00000582230 HRCP23327 699 aa29.88■■■□□ 2.37
TOP3A-213ENST00000582230 RAB3GAP2Q9H2M9 1393 aa29.88■■■□□ 2.37
TOP3A-213ENST00000582230 NPATQ14207 1427 aa29.88■■■□□ 2.37
TOP3A-213ENST00000582230 CEP152O94986 1710 aa29.87■■■□□ 2.37
TOP3A-213ENST00000582230 IQGAP3Q86VI3 1631 aa29.86■■■□□ 2.37
TOP3A-213ENST00000582230 CAMSAP1Q5T5Y3 1602 aa29.85■■■□□ 2.37
TOP3A-213ENST00000582230 FBXO31Q5XUX0 539 aaPredicted RBP29.82■■■□□ 2.36
TOP3A-213ENST00000582230 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
TOP3A-213ENST00000582230 TET3O43151 1660 aa29.8■■■□□ 2.36
TOP3A-213ENST00000582230 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
TOP3A-213ENST00000582230 SLC4A1APQ9BWU0 796 aaKnown RBP29.76■■■□□ 2.35
TOP3A-213ENST00000582230 ERVK-7P63135 1459 aa29.75■■■□□ 2.35
TOP3A-213ENST00000582230 TNRQ92752 1358 aa29.75■■■□□ 2.35
TOP3A-213ENST00000582230 SPATA31D1Q6ZQQ2 1576 aa29.73■■■□□ 2.35
TOP3A-213ENST00000582230 MPHOSPH9Q99550 1183 aa29.71■■■□□ 2.35
TOP3A-213ENST00000582230 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
TOP3A-213ENST00000582230 PKD2Q13563 968 aa29.7■■■□□ 2.35
TOP3A-213ENST00000582230 SETD1BQ9UPS6 1966 aaKnown RBP29.7■■■□□ 2.34
TOP3A-213ENST00000582230 NOS1P29475 1434 aa29.69■■■□□ 2.34
TOP3A-213ENST00000582230 PREX1Q8TCU6 1659 aa29.68■■■□□ 2.34
TOP3A-213ENST00000582230 E9PCH4 1651 aa29.66■■■□□ 2.34
TOP3A-213ENST00000582230 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
TOP3A-213ENST00000582230 PCGF6Q9BYE7 350 aa29.63■■■□□ 2.33
TOP3A-213ENST00000582230 SLC52A1Q9NWF4 448 aa29.63■■■□□ 2.33
TOP3A-213ENST00000582230 LMTK3Q96Q04 1460 aa29.61■■■□□ 2.33
TOP3A-213ENST00000582230 MYO3AQ8NEV4 1616 aa29.6■■■□□ 2.33
TOP3A-213ENST00000582230 PTPRTO14522 1441 aa29.6■■■□□ 2.33
TOP3A-213ENST00000582230 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
TOP3A-213ENST00000582230 CFAP65Q6ZU64 1925 aaKnown RBP29.57■■■□□ 2.32
TOP3A-213ENST00000582230 SYNMO15061 1565 aa29.57■■■□□ 2.32
TOP3A-213ENST00000582230 IDI1Q13907 227 aa29.57■■■□□ 2.32
TOP3A-213ENST00000582230 CEP170BQ9Y4F5 1589 aaPredicted RBP29.56■■■□□ 2.32
TOP3A-213ENST00000582230 FOXD1Q16676 465 aa29.54■■■□□ 2.32
TOP3A-213ENST00000582230 ZNF142P52746 1687 aaPredicted RBP29.53■■■□□ 2.32
TOP3A-213ENST00000582230 THEMISQ8N1K5 641 aaPredicted RBP29.52■■■□□ 2.32
TOP3A-213ENST00000582230 PLA2R1Q13018 1463 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 HSPA2P54652 639 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 STAG3Q9UJ98 1225 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 UGGT1Q9NYU2 1555 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 SPHKAPQ2M3C7 1700 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 TRPM2O94759 1503 aa29.5■■■□□ 2.31
TOP3A-213ENST00000582230 PIK3C2BO00750 1634 aa29.46■■■□□ 2.31
TOP3A-213ENST00000582230 KDM5AP29375 1690 aaKnown RBP29.41■■■□□ 2.3
TOP3A-213ENST00000582230 CCDC144AA2RUR9 1427 aa29.41■■■□□ 2.3
TOP3A-213ENST00000582230 ADGRB3O60242 1522 aa29.4■■■□□ 2.3
TOP3A-213ENST00000582230 ANKRD30BQ9BXX2 1392 aa29.4■■■□□ 2.3
TOP3A-213ENST00000582230 CHGAP10645 457 aaKnown RBP29.4■■■□□ 2.3
TOP3A-213ENST00000582230 UBR1Q8IWV7 1749 aa29.4■■■□□ 2.3
TOP3A-213ENST00000582230 CLTCL1P53675 1640 aa29.38■■■□□ 2.29
TOP3A-213ENST00000582230 DHX57Q6P158 1386 aaKnown RBP29.36■■■□□ 2.29
TOP3A-213ENST00000582230 TMEM131LA2VDJ0 1609 aa29.35■■■□□ 2.29
TOP3A-213ENST00000582230 ANKLE2Q86XL3 938 aa29.35■■■□□ 2.29
TOP3A-213ENST00000582230 TMEM2Q9UHN6 1383 aa29.35■■■□□ 2.29
TOP3A-213ENST00000582230 SLIT1O75093 1534 aa29.33■■■□□ 2.29
TOP3A-213ENST00000582230 ARHGAP23Q9P227 1491 aa29.32■■■□□ 2.28
TOP3A-213ENST00000582230 HDGFP51858 240 aaKnown RBP29.32■■■□□ 2.28
TOP3A-213ENST00000582230 EID1Q9Y6B2 187 aa29.32■■■□□ 2.28
TOP3A-213ENST00000582230 NCKAP5LQ9HCH0 1330 aa29.29■■■□□ 2.28
TOP3A-213ENST00000582230 TXNDC2Q86VQ3 553 aa29.29■■■□□ 2.28
TOP3A-213ENST00000582230 DMRT2Q9Y5R5 561 aa29.29■■■□□ 2.28
TOP3A-213ENST00000582230 ZNF326Q5BKZ1 582 aaKnown RBP29.28■■■□□ 2.28
TOP3A-213ENST00000582230 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.27■■■□□ 2.28
TOP3A-213ENST00000582230 LTKP29376 864 aa29.25■■■□□ 2.27
TOP3A-213ENST00000582230 RIMS2Q9UQ26 1411 aa29.25■■■□□ 2.27
TOP3A-213ENST00000582230 KIF1BO60333 1816 aa29.24■■■□□ 2.27
TOP3A-213ENST00000582230 SCAF11Q99590 1463 aaKnown RBP29.24■■■□□ 2.27
TOP3A-213ENST00000582230 ZFYVE9O95405 1425 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms