RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ADGRL2O95490 1459 aa15.85■□□□□ 0.13
TOP3A-212ENST00000582122 ROCK1Q13464 1354 aa15.85■□□□□ 0.13
TOP3A-212ENST00000582122 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
TOP3A-212ENST00000582122 ERBINQ96RT1 1412 aa15.85■□□□□ 0.13
TOP3A-212ENST00000582122 GGT6Q6P531 493 aa15.84■□□□□ 0.13
TOP3A-212ENST00000582122 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
TOP3A-212ENST00000582122 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
TOP3A-212ENST00000582122 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.13
TOP3A-212ENST00000582122 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
TOP3A-212ENST00000582122 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
TOP3A-212ENST00000582122 SETD1BQ9UPS6 1966 aaKnown RBP15.79■□□□□ 0.12
TOP3A-212ENST00000582122 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
TOP3A-212ENST00000582122 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
TOP3A-212ENST00000582122 WASHC2CQ9Y4E1 1318 aa15.78■□□□□ 0.12
TOP3A-212ENST00000582122 KANK1Q14678 1352 aa15.77■□□□□ 0.12
TOP3A-212ENST00000582122 RNF17Q9BXT8 1623 aaKnown RBP15.77■□□□□ 0.12
TOP3A-212ENST00000582122 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.11
TOP3A-212ENST00000582122 ZMYM3Q14202 1370 aa15.76■□□□□ 0.11
TOP3A-212ENST00000582122 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-212ENST00000582122 KDM5DQ9BY66 1539 aa15.76■□□□□ 0.11
TOP3A-212ENST00000582122 PTPRTO14522 1441 aa15.76■□□□□ 0.11
TOP3A-212ENST00000582122 NPATQ14207 1427 aa15.76■□□□□ 0.11
TOP3A-212ENST00000582122 STRCQ7RTU9 1775 aa15.75■□□□□ 0.11
TOP3A-212ENST00000582122 ITGAEP38570 1179 aa15.75■□□□□ 0.11
TOP3A-212ENST00000582122 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
TOP3A-212ENST00000582122 ZC3H13Q5T200 1668 aaKnown RBP15.73■□□□□ 0.11
TOP3A-212ENST00000582122 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
TOP3A-212ENST00000582122 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
TOP3A-212ENST00000582122 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.11
TOP3A-212ENST00000582122 CLTCQ00610 1675 aaKnown RBP15.71■□□□□ 0.11
TOP3A-212ENST00000582122 SOCS7O14512 581 aa15.71■□□□□ 0.11
TOP3A-212ENST00000582122 PRDM15P57071 1507 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-212ENST00000582122 C3P01024 1663 aa15.7■□□□□ 0.1
TOP3A-212ENST00000582122 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
TOP3A-212ENST00000582122 ABCC3O15438 1527 aa15.68■□□□□ 0.1
TOP3A-212ENST00000582122 PZPP20742 1482 aa15.68■□□□□ 0.1
TOP3A-212ENST00000582122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
TOP3A-212ENST00000582122 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
TOP3A-212ENST00000582122 MROH1Q8NDA8 1641 aa15.67■□□□□ 0.1
TOP3A-212ENST00000582122 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
TOP3A-212ENST00000582122 LMTK2Q8IWU2 1503 aa15.66■□□□□ 0.1
TOP3A-212ENST00000582122 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
TOP3A-212ENST00000582122 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
TOP3A-212ENST00000582122 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
TOP3A-212ENST00000582122 NAIPQ13075 1403 aa15.63■□□□□ 0.09
TOP3A-212ENST00000582122 TNRQ92752 1358 aa15.62■□□□□ 0.09
TOP3A-212ENST00000582122 UNC13BO14795 1591 aa15.62■□□□□ 0.09
TOP3A-212ENST00000582122 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
TOP3A-212ENST00000582122 RPRD2Q5VT52 1461 aaKnown RBP15.61■□□□□ 0.09
TOP3A-212ENST00000582122 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
TOP3A-212ENST00000582122 NLRP1Q9C000 1473 aa15.6■□□□□ 0.09
TOP3A-212ENST00000582122 NUP155O75694 1391 aa15.6■□□□□ 0.09
TOP3A-212ENST00000582122 CEP152O94986 1710 aa15.6■□□□□ 0.09
TOP3A-212ENST00000582122 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
TOP3A-212ENST00000582122 ERVK-7P63135 1459 aa15.58■□□□□ 0.08
TOP3A-212ENST00000582122 EFCAB6Q5THR3 1501 aa15.58■□□□□ 0.08
TOP3A-212ENST00000582122 A2ML1A8K2U0 1454 aa15.57■□□□□ 0.08
TOP3A-212ENST00000582122 PLA2R1Q13018 1463 aa15.57■□□□□ 0.08
TOP3A-212ENST00000582122 IQGAP3Q86VI3 1631 aa15.56■□□□□ 0.08
TOP3A-212ENST00000582122 TET3O43151 1660 aa15.56■□□□□ 0.08
TOP3A-212ENST00000582122 ZNF142P52746 1687 aaPredicted RBP15.55■□□□□ 0.08
TOP3A-212ENST00000582122 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
TOP3A-212ENST00000582122 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
TOP3A-212ENST00000582122 MYO3AQ8NEV4 1616 aa15.54■□□□□ 0.08
TOP3A-212ENST00000582122 CEP170BQ9Y4F5 1589 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-212ENST00000582122 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
TOP3A-212ENST00000582122 PKD2Q13563 968 aa15.53■□□□□ 0.08
TOP3A-212ENST00000582122 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
TOP3A-212ENST00000582122 HRCP23327 699 aa15.52■□□□□ 0.08
TOP3A-212ENST00000582122 NOS1P29475 1434 aa15.51■□□□□ 0.07
TOP3A-212ENST00000582122 ZNF335Q9H4Z2 1342 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-212ENST00000582122 UGGT1Q9NYU2 1555 aa15.49■□□□□ 0.07
TOP3A-212ENST00000582122 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
TOP3A-212ENST00000582122 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
TOP3A-212ENST00000582122 CFAP65Q6ZU64 1925 aaKnown RBP15.49■□□□□ 0.07
TOP3A-212ENST00000582122 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
TOP3A-212ENST00000582122 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
TOP3A-212ENST00000582122 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
TOP3A-212ENST00000582122 KDM5AP29375 1690 aaKnown RBP15.46■□□□□ 0.07
TOP3A-212ENST00000582122 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
TOP3A-212ENST00000582122 IDI1Q13907 227 aa15.45■□□□□ 0.06
TOP3A-212ENST00000582122 E9PCH4 1651 aa15.44■□□□□ 0.06
TOP3A-212ENST00000582122 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
TOP3A-212ENST00000582122 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
TOP3A-212ENST00000582122 SYNMO15061 1565 aa15.43■□□□□ 0.06
TOP3A-212ENST00000582122 CPS1P31327 1500 aa15.42■□□□□ 0.06
TOP3A-212ENST00000582122 TRIM26Q12899 539 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-212ENST00000582122 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
TOP3A-212ENST00000582122 UBR1Q8IWV7 1749 aa15.4■□□□□ 0.06
TOP3A-212ENST00000582122 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
TOP3A-212ENST00000582122 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
TOP3A-212ENST00000582122 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
TOP3A-212ENST00000582122 SLIT1O75093 1534 aa15.39■□□□□ 0.05
TOP3A-212ENST00000582122 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
TOP3A-212ENST00000582122 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
TOP3A-212ENST00000582122 MED14O60244 1454 aa15.38■□□□□ 0.05
TOP3A-212ENST00000582122 ARHGAP23Q9P227 1491 aa15.38■□□□□ 0.05
TOP3A-212ENST00000582122 TRPM2O94759 1503 aa15.38■□□□□ 0.05
TOP3A-212ENST00000582122 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
TOP3A-212ENST00000582122 TOM1O60784 492 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms