RNA–Protein interactions for RNA: ENST00000581967.1

CTC1-210, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-210ENST00000581967 TIAM1Q13009 1591 aa10.52□□□□□ -0.72
CTC1-210ENST00000581967 EHBP1L1Q8N3D4 1523 aa10.52□□□□□ -0.73
CTC1-210ENST00000581967 WASHC2CQ9Y4E1 1318 aa10.52□□□□□ -0.73
CTC1-210ENST00000581967 PZPP20742 1482 aa10.51□□□□□ -0.73
CTC1-210ENST00000581967 ANKLE2Q86XL3 938 aa10.51□□□□□ -0.73
CTC1-210ENST00000581967 THEMISQ8N1K5 641 aaPredicted RBP10.51□□□□□ -0.73
CTC1-210ENST00000581967 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
CTC1-210ENST00000581967 FAM135AQ9P2D6 1515 aa10.5□□□□□ -0.73
CTC1-210ENST00000581967 TOM1O60784 492 aa10.5□□□□□ -0.73
CTC1-210ENST00000581967 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
CTC1-210ENST00000581967 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
CTC1-210ENST00000581967 SHANK2Q9UPX8 1470 aa10.49□□□□□ -0.73
CTC1-210ENST00000581967 CPS1P31327 1500 aa10.49□□□□□ -0.73
CTC1-210ENST00000581967 HSPA1LP34931 641 aa10.49□□□□□ -0.73
CTC1-210ENST00000581967 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
CTC1-210ENST00000581967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.73
CTC1-210ENST00000581967 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
CTC1-210ENST00000581967 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
CTC1-210ENST00000581967 NCOA2Q15596 1464 aa10.48□□□□□ -0.73
CTC1-210ENST00000581967 NLRP1Q9C000 1473 aa10.48□□□□□ -0.73
CTC1-210ENST00000581967 TSPY4P0CV99 314 aa10.47□□□□□ -0.73
CTC1-210ENST00000581967 TSPY10P0CW01 314 aa10.47□□□□□ -0.73
CTC1-210ENST00000581967 CAMSAP2Q08AD1 1489 aa10.47□□□□□ -0.73
CTC1-210ENST00000581967 NEURL4Q96JN8 1562 aa10.47□□□□□ -0.73
CTC1-210ENST00000581967 NPHP4O75161 1426 aaPredicted RBP10.46□□□□□ -0.74
CTC1-210ENST00000581967 MED14O60244 1454 aa10.46□□□□□ -0.74
CTC1-210ENST00000581967 VWDEQ8N2E2 1590 aa10.44□□□□□ -0.74
CTC1-210ENST00000581967 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
CTC1-210ENST00000581967 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
CTC1-210ENST00000581967 DEPDC5O75140 1603 aa10.42□□□□□ -0.74
CTC1-210ENST00000581967 POLR1AO95602 1720 aaPredicted RBP10.41□□□□□ -0.74
CTC1-210ENST00000581967 MED1Q15648 1581 aaPredicted RBP10.41□□□□□ -0.74
CTC1-210ENST00000581967 ABCC3O15438 1527 aa10.4□□□□□ -0.74
CTC1-210ENST00000581967 ALKQ9UM73 1620 aa10.4□□□□□ -0.75
CTC1-210ENST00000581967 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
CTC1-210ENST00000581967 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
CTC1-210ENST00000581967 LRRC9Q6ZRR7 1453 aa10.39□□□□□ -0.75
CTC1-210ENST00000581967 RNF17Q9BXT8 1623 aaKnown RBP10.39□□□□□ -0.75
CTC1-210ENST00000581967 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
CTC1-210ENST00000581967 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
CTC1-210ENST00000581967 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
CTC1-210ENST00000581967 IQGAP1P46940 1657 aa10.37□□□□□ -0.75
CTC1-210ENST00000581967 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
CTC1-210ENST00000581967 VPS8Q8N3P4 1428 aa10.36□□□□□ -0.75
CTC1-210ENST00000581967 LTKP29376 864 aa10.36□□□□□ -0.75
CTC1-210ENST00000581967 TXNDC2Q86VQ3 553 aa10.36□□□□□ -0.75
CTC1-210ENST00000581967 SCAF11Q99590 1463 aaKnown RBP10.36□□□□□ -0.75
CTC1-210ENST00000581967 ZC3H13Q5T200 1668 aaKnown RBP10.35□□□□□ -0.75
CTC1-210ENST00000581967 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
CTC1-210ENST00000581967 MROH1Q8NDA8 1641 aa10.35□□□□□ -0.75
CTC1-210ENST00000581967 EIF2AK4Q9P2K8 1649 aaKnown RBP10.35□□□□□ -0.75
CTC1-210ENST00000581967 ARHGAP23Q9P227 1491 aa10.35□□□□□ -0.75
CTC1-210ENST00000581967 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
CTC1-210ENST00000581967 DUOX2Q9NRD8 1548 aa10.34□□□□□ -0.75
CTC1-210ENST00000581967 EID1Q9Y6B2 187 aa10.34□□□□□ -0.75
CTC1-210ENST00000581967 SLIT1O75093 1534 aa10.33□□□□□ -0.76
CTC1-210ENST00000581967 SENP3Q9H4L4 574 aaPredicted RBP10.33□□□□□ -0.76
CTC1-210ENST00000581967 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
CTC1-210ENST00000581967 SYNMO15061 1565 aa10.33□□□□□ -0.76
CTC1-210ENST00000581967 STRCP1A6NGW2 1772 aa10.32□□□□□ -0.76
CTC1-210ENST00000581967 TMEM2Q9UHN6 1383 aa10.32□□□□□ -0.76
CTC1-210ENST00000581967 RRP7BPQ9NSQ0 103 aa10.32□□□□□ -0.76
CTC1-210ENST00000581967 ERBINQ96RT1 1412 aa10.32□□□□□ -0.76
CTC1-210ENST00000581967 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
CTC1-210ENST00000581967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
CTC1-210ENST00000581967 RGS17Q9UGC6 210 aaPredicted RBP10.31□□□□□ -0.76
CTC1-210ENST00000581967 ABCC5O15440 1437 aa10.31□□□□□ -0.76
CTC1-210ENST00000581967 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
CTC1-210ENST00000581967 PRDM15P57071 1507 aaPredicted RBP10.3□□□□□ -0.76
CTC1-210ENST00000581967 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
CTC1-210ENST00000581967 FAM135BQ49AJ0 1406 aa10.3□□□□□ -0.76
CTC1-210ENST00000581967 KANK1Q14678 1352 aa10.29□□□□□ -0.76
CTC1-210ENST00000581967 KCNA6P17658 529 aa10.29□□□□□ -0.76
CTC1-210ENST00000581967 IDI1Q13907 227 aa10.29□□□□□ -0.76
CTC1-210ENST00000581967 TMEM94Q12767 1356 aa10.27□□□□□ -0.76
CTC1-210ENST00000581967 CEP152O94986 1710 aa10.27□□□□□ -0.76
CTC1-210ENST00000581967 ANKRD30AQ9BXX3 1397 aa10.26□□□□□ -0.77
CTC1-210ENST00000581967 DAPK1P53355 1430 aa10.26□□□□□ -0.77
CTC1-210ENST00000581967 PROSER2Q86WR7 435 aaPredicted RBP10.26□□□□□ -0.77
CTC1-210ENST00000581967 SLC26A8Q96RN1 970 aa10.26□□□□□ -0.77
CTC1-210ENST00000581967 LMTK2Q8IWU2 1503 aa10.26□□□□□ -0.77
CTC1-210ENST00000581967 EFCAB6Q5THR3 1501 aa10.25□□□□□ -0.77
CTC1-210ENST00000581967 APLP2Q06481 763 aa10.25□□□□□ -0.77
CTC1-210ENST00000581967 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
CTC1-210ENST00000581967 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
CTC1-210ENST00000581967 NOS1P29475 1434 aa10.24□□□□□ -0.77
CTC1-210ENST00000581967 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
CTC1-210ENST00000581967 CHIC2Q9UKJ5 165 aa10.24□□□□□ -0.77
CTC1-210ENST00000581967 TET3O43151 1660 aa10.24□□□□□ -0.77
CTC1-210ENST00000581967 PTPN23Q9H3S7 1636 aa10.23□□□□□ -0.77
CTC1-210ENST00000581967 KDM5AP29375 1690 aaKnown RBP10.23□□□□□ -0.77
CTC1-210ENST00000581967 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
CTC1-210ENST00000581967 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
CTC1-210ENST00000581967 XIRP1Q702N8 1843 aaKnown RBP10.22□□□□□ -0.77
CTC1-210ENST00000581967 SLAIN2Q9P270 581 aa10.22□□□□□ -0.77
CTC1-210ENST00000581967 CFAP65Q6ZU64 1925 aaKnown RBP10.22□□□□□ -0.77
CTC1-210ENST00000581967 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
CTC1-210ENST00000581967 BCANQ96GW7 911 aa10.21□□□□□ -0.77
CTC1-210ENST00000581967 MSH6P52701 1360 aa10.21□□□□□ -0.78
CTC1-210ENST00000581967 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms