RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 NCOA1Q15788 1441 aa35.02■■■■□ 3.2
CASC3-207ENST00000581849 EIF2AK4Q9P2K8 1649 aaKnown RBP34.99■■■■□ 3.19
CASC3-207ENST00000581849 RNF17Q9BXT8 1623 aaKnown RBP34.98■■■■□ 3.19
CASC3-207ENST00000581849 PTPN23Q9H3S7 1636 aa34.98■■■■□ 3.19
CASC3-207ENST00000581849 SHANK2Q9UPX8 1470 aa34.97■■■■□ 3.19
CASC3-207ENST00000581849 CEP170BQ9Y4F5 1589 aaPredicted RBP34.96■■■■□ 3.19
CASC3-207ENST00000581849 PZPP20742 1482 aa34.96■■■■□ 3.19
CASC3-207ENST00000581849 CAMSAP1Q5T5Y3 1602 aa34.95■■■■□ 3.19
CASC3-207ENST00000581849 CROCC2H7BZ55 1655 aa34.93■■■■□ 3.18
CASC3-207ENST00000581849 PLA2R1Q13018 1463 aa34.93■■■■□ 3.18
CASC3-207ENST00000581849 TCOF1Q13428 1488 aaKnown RBP34.93■■■■□ 3.18
CASC3-207ENST00000581849 FGD6Q6ZV73 1430 aa34.93■■■■□ 3.18
CASC3-207ENST00000581849 WASHC2CQ9Y4E1 1318 aa34.93■■■■□ 3.18
CASC3-207ENST00000581849 CERKQ8TCT0 537 aa34.92■■■■□ 3.18
CASC3-207ENST00000581849 DUOX2Q9NRD8 1548 aa34.91■■■■□ 3.18
CASC3-207ENST00000581849 ABCC5O15440 1437 aa34.89■■■■□ 3.18
CASC3-207ENST00000581849 ZC3H13Q5T200 1668 aaKnown RBP34.89■■■■□ 3.18
CASC3-207ENST00000581849 A2ML1A8K2U0 1454 aa34.88■■■■□ 3.17
CASC3-207ENST00000581849 DNMT1P26358 1616 aaKnown RBP34.88■■■■□ 3.17
CASC3-207ENST00000581849 TNRQ92752 1358 aa34.85■■■■□ 3.17
CASC3-207ENST00000581849 DAPK1P53355 1430 aa34.84■■■■□ 3.17
CASC3-207ENST00000581849 ABCC3O15438 1527 aa34.83■■■■□ 3.17
CASC3-207ENST00000581849 MROH1Q8NDA8 1641 aa34.82■■■■□ 3.16
CASC3-207ENST00000581849 PKD2Q13563 968 aa34.82■■■■□ 3.16
CASC3-207ENST00000581849 KIF15Q9NS87 1388 aa34.81■■■■□ 3.16
CASC3-207ENST00000581849 ERBINQ96RT1 1412 aa34.81■■■■□ 3.16
CASC3-207ENST00000581849 FBXO31Q5XUX0 539 aaPredicted RBP34.79■■■■□ 3.16
CASC3-207ENST00000581849 NLRP1Q9C000 1473 aa34.77■■■■□ 3.16
CASC3-207ENST00000581849 PRDM15P57071 1507 aaPredicted RBP34.74■■■■□ 3.15
CASC3-207ENST00000581849 NCKAP5LQ9HCH0 1330 aa34.73■■■■□ 3.15
CASC3-207ENST00000581849 LTBP4Q8N2S1 1624 aa34.73■■■■□ 3.15
CASC3-207ENST00000581849 SPATA31D1Q6ZQQ2 1576 aa34.72■■■■□ 3.15
CASC3-207ENST00000581849 ANKRD30AQ9BXX3 1397 aa34.71■■■■□ 3.15
CASC3-207ENST00000581849 RRP7BPQ9NSQ0 103 aa34.69■■■■□ 3.14
CASC3-207ENST00000581849 DEPDC5O75140 1603 aa34.69■■■■□ 3.14
CASC3-207ENST00000581849 CEP152O94986 1710 aa34.69■■■■□ 3.14
CASC3-207ENST00000581849 IQSEC2Q5JU85 1478 aa34.68■■■■□ 3.14
CASC3-207ENST00000581849 ADGRL2O95490 1459 aa34.65■■■■□ 3.14
CASC3-207ENST00000581849 ERVK-7P63135 1459 aa34.65■■■■□ 3.14
CASC3-207ENST00000581849 ARHGAP31Q2M1Z3 1444 aa34.64■■■■□ 3.14
CASC3-207ENST00000581849 POLR1AO95602 1720 aaPredicted RBP34.64■■■■□ 3.14
CASC3-207ENST00000581849 UGGT1Q9NYU2 1555 aa34.63■■■■□ 3.13
CASC3-207ENST00000581849 THEMISQ8N1K5 641 aaPredicted RBP34.62■■■■□ 3.13
CASC3-207ENST00000581849 KANK1Q14678 1352 aa34.58■■■■□ 3.13
CASC3-207ENST00000581849 NEURL4Q96JN8 1562 aa34.57■■■■□ 3.13
CASC3-207ENST00000581849 CHIC2Q9UKJ5 165 aa34.57■■■■□ 3.12
CASC3-207ENST00000581849 FAM50AQ14320 339 aaKnown RBP34.56■■■■□ 3.12
CASC3-207ENST00000581849 LMTK2Q8IWU2 1503 aa34.55■■■■□ 3.12
CASC3-207ENST00000581849 VWDEQ8N2E2 1590 aa34.54■■■■□ 3.12
CASC3-207ENST00000581849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.54■■■■□ 3.12
CASC3-207ENST00000581849 ANKLE2Q86XL3 938 aa34.54■■■■□ 3.12
CASC3-207ENST00000581849 ZNF335Q9H4Z2 1342 aaPredicted RBP34.53■■■■□ 3.12
CASC3-207ENST00000581849 MED14O60244 1454 aa34.51■■■■□ 3.11
CASC3-207ENST00000581849 CFAP65Q6ZU64 1925 aaKnown RBP34.49■■■■□ 3.11
CASC3-207ENST00000581849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.48■■■■□ 3.111e-6■■■□□ 16.4
CASC3-207ENST00000581849 UBR1Q8IWV7 1749 aa34.46■■■■□ 3.11
CASC3-207ENST00000581849 ANKRD50Q9ULJ7 1429 aa34.45■■■■□ 3.11
CASC3-207ENST00000581849 NPHP4O75161 1426 aaPredicted RBP34.43■■■■□ 3.1
CASC3-207ENST00000581849 CPS1P31327 1500 aa34.4■■■■□ 3.1
CASC3-207ENST00000581849 EFCAB6Q5THR3 1501 aa34.4■■■■□ 3.1
CASC3-207ENST00000581849 ROCK1Q13464 1354 aa34.39■■■■□ 3.1
CASC3-207ENST00000581849 IQGAP1P46940 1657 aa34.38■■■■□ 3.09
CASC3-207ENST00000581849 SLIT1O75093 1534 aa34.36■■■■□ 3.09
CASC3-207ENST00000581849 KDM5AP29375 1690 aaKnown RBP34.36■■■■□ 3.09
CASC3-207ENST00000581849 ARHGAP23Q9P227 1491 aa34.36■■■■□ 3.09
CASC3-207ENST00000581849 RPRD2Q5VT52 1461 aaKnown RBP34.33■■■■□ 3.09
CASC3-207ENST00000581849 NOS1P29475 1434 aa34.33■■■■□ 3.09
CASC3-207ENST00000581849 PIK3C2BO00750 1634 aa34.33■■■■□ 3.09
CASC3-207ENST00000581849 SCAF11Q99590 1463 aaKnown RBP34.33■■■■□ 3.09
CASC3-207ENST00000581849 UNC13BO14795 1591 aa34.31■■■■□ 3.08
CASC3-207ENST00000581849 TET3O43151 1660 aa34.28■■■■□ 3.08
CASC3-207ENST00000581849 SYNMO15061 1565 aa34.28■■■■□ 3.08
CASC3-207ENST00000581849 TMEM2Q9UHN6 1383 aa34.23■■■■□ 3.07
CASC3-207ENST00000581849 GCC2Q8IWJ2 1684 aa34.22■■■■□ 3.07
CASC3-207ENST00000581849 IDI1Q13907 227 aa34.22■■■■□ 3.07
CASC3-207ENST00000581849 SLC52A1Q9NWF4 448 aa34.22■■■■□ 3.07
CASC3-207ENST00000581849 UBAP1LF5GYI3 381 aa34.21■■■■□ 3.07
CASC3-207ENST00000581849 TXNDC2Q86VQ3 553 aa34.21■■■■□ 3.07
CASC3-207ENST00000581849 EID1Q9Y6B2 187 aa34.21■■■■□ 3.07
CASC3-207ENST00000581849 STAG3Q9UJ98 1225 aa34.2■■■■□ 3.07
CASC3-207ENST00000581849 LTKP29376 864 aa34.19■■■■□ 3.06
CASC3-207ENST00000581849 ADGRB3O60242 1522 aa34.19■■■■□ 3.06
CASC3-207ENST00000581849 IQGAP3Q86VI3 1631 aa34.16■■■■□ 3.06
CASC3-207ENST00000581849 PPARGC1BQ86YN6 1023 aaKnown RBP34.16■■■■□ 3.06
CASC3-207ENST00000581849 RRBP1Q9P2E9 1410 aaKnown RBP34.15■■■■□ 3.06
CASC3-207ENST00000581849 STRCP1A6NGW2 1772 aa34.13■■■■□ 3.05
CASC3-207ENST00000581849 TOM1O60784 492 aa34.09■■■■□ 3.05
CASC3-207ENST00000581849 ITGAEP38570 1179 aa34.09■■■■□ 3.05
CASC3-207ENST00000581849 E9PCH4 1651 aa34.08■■■■□ 3.05
CASC3-207ENST00000581849 LRRC7Q96NW7 1537 aa34.08■■■■□ 3.05
CASC3-207ENST00000581849 NUP155O75694 1391 aa34.04■■■■□ 3.04
CASC3-207ENST00000581849 TMEM131LA2VDJ0 1609 aa34.01■■■■□ 3.04
CASC3-207ENST00000581849 ZFYVE9O95405 1425 aa33.98■■■■□ 3.03
CASC3-207ENST00000581849 MYO5BQ9ULV0 1848 aa33.97■■■■□ 3.03
CASC3-207ENST00000581849 ALKQ9UM73 1620 aa33.96■■■■□ 3.03
CASC3-207ENST00000581849 HDGFP51858 240 aaKnown RBP33.95■■■■□ 3.03
CASC3-207ENST00000581849 RIMS2Q9UQ26 1411 aa33.92■■■■□ 3.02
CASC3-207ENST00000581849 PLEKHG1Q9ULL1 1385 aa33.91■■■■□ 3.02
CASC3-207ENST00000581849 NAIPQ13075 1403 aa33.9■■■■□ 3.02
CASC3-207ENST00000581849 PIP4K2BP78356 416 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms