RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
RTTN-208ENST00000581709 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
RTTN-208ENST00000581709 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
RTTN-208ENST00000581709 CROCC2H7BZ55 1655 aa13.34□□□□□ -0.27
RTTN-208ENST00000581709 ZMYM3Q14202 1370 aa13.33□□□□□ -0.27
RTTN-208ENST00000581709 NAIPQ13075 1403 aa13.32□□□□□ -0.28
RTTN-208ENST00000581709 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
RTTN-208ENST00000581709 BCORL1Q5H9F3 1711 aa13.32□□□□□ -0.28
RTTN-208ENST00000581709 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
RTTN-208ENST00000581709 PTPRMP28827 1452 aa13.31□□□□□ -0.28
RTTN-208ENST00000581709 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
RTTN-208ENST00000581709 ADAMTSL3P82987 1691 aa13.3□□□□□ -0.28
RTTN-208ENST00000581709 NUP155O75694 1391 aa13.3□□□□□ -0.28
RTTN-208ENST00000581709 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
RTTN-208ENST00000581709 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
RTTN-208ENST00000581709 HRCP23327 699 aa13.27□□□□□ -0.29
RTTN-208ENST00000581709 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
RTTN-208ENST00000581709 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
RTTN-208ENST00000581709 KDM5DQ9BY66 1539 aa13.24□□□□□ -0.29
RTTN-208ENST00000581709 FAM135AQ9P2D6 1515 aa13.24□□□□□ -0.29
RTTN-208ENST00000581709 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
RTTN-208ENST00000581709 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
RTTN-208ENST00000581709 ABCC3O15438 1527 aa13.22□□□□□ -0.29
RTTN-208ENST00000581709 NPATQ14207 1427 aa13.22□□□□□ -0.29
RTTN-208ENST00000581709 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
RTTN-208ENST00000581709 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.29
RTTN-208ENST00000581709 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.29
RTTN-208ENST00000581709 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
RTTN-208ENST00000581709 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
RTTN-208ENST00000581709 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
RTTN-208ENST00000581709 PKD2Q13563 968 aa13.2□□□□□ -0.3
RTTN-208ENST00000581709 PZPP20742 1482 aa13.2□□□□□ -0.3
RTTN-208ENST00000581709 TNRQ92752 1358 aa13.2□□□□□ -0.3
RTTN-208ENST00000581709 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
RTTN-208ENST00000581709 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
RTTN-208ENST00000581709 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
RTTN-208ENST00000581709 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
RTTN-208ENST00000581709 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
RTTN-208ENST00000581709 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
RTTN-208ENST00000581709 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
RTTN-208ENST00000581709 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
RTTN-208ENST00000581709 UHRF1BP1Q6BDS2 1440 aa13.16□□□□□ -0.3
RTTN-208ENST00000581709 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
RTTN-208ENST00000581709 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
RTTN-208ENST00000581709 IDI1Q13907 227 aa13.15□□□□□ -0.3
RTTN-208ENST00000581709 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
RTTN-208ENST00000581709 UNC13BO14795 1591 aa13.15□□□□□ -0.3
RTTN-208ENST00000581709 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.31
RTTN-208ENST00000581709 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.31
RTTN-208ENST00000581709 C3P01024 1663 aa13.13□□□□□ -0.31
RTTN-208ENST00000581709 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
RTTN-208ENST00000581709 HSPA2P54652 639 aa13.13□□□□□ -0.31
RTTN-208ENST00000581709 FOXD1Q16676 465 aa13.12□□□□□ -0.31
RTTN-208ENST00000581709 NOS1P29475 1434 aa13.12□□□□□ -0.31
RTTN-208ENST00000581709 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
RTTN-208ENST00000581709 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
RTTN-208ENST00000581709 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
RTTN-208ENST00000581709 EFCAB6Q5THR3 1501 aa13.11□□□□□ -0.31
RTTN-208ENST00000581709 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
RTTN-208ENST00000581709 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
RTTN-208ENST00000581709 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
RTTN-208ENST00000581709 CEP152O94986 1710 aa13.09□□□□□ -0.31
RTTN-208ENST00000581709 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
RTTN-208ENST00000581709 TET3O43151 1660 aa13.08□□□□□ -0.31
RTTN-208ENST00000581709 PTPRTO14522 1441 aa13.08□□□□□ -0.32
RTTN-208ENST00000581709 ANKLE2Q86XL3 938 aa13.08□□□□□ -0.32
RTTN-208ENST00000581709 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
RTTN-208ENST00000581709 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
RTTN-208ENST00000581709 LMTK3Q96Q04 1460 aa13.08□□□□□ -0.32
RTTN-208ENST00000581709 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
RTTN-208ENST00000581709 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
RTTN-208ENST00000581709 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
RTTN-208ENST00000581709 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
RTTN-208ENST00000581709 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
RTTN-208ENST00000581709 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTTN-208ENST00000581709 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
RTTN-208ENST00000581709 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
RTTN-208ENST00000581709 E9PCH4 1651 aa13.02□□□□□ -0.32
RTTN-208ENST00000581709 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.32
RTTN-208ENST00000581709 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
RTTN-208ENST00000581709 CEP170BQ9Y4F5 1589 aaPredicted RBP13.02□□□□□ -0.33
RTTN-208ENST00000581709 PPP1R15AO75807 674 aaPredicted RBP13.01□□□□□ -0.33
RTTN-208ENST00000581709 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
RTTN-208ENST00000581709 BCANQ96GW7 911 aa13.01□□□□□ -0.33
RTTN-208ENST00000581709 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
RTTN-208ENST00000581709 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
RTTN-208ENST00000581709 SYNMO15061 1565 aa13□□□□□ -0.33
RTTN-208ENST00000581709 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
RTTN-208ENST00000581709 LTKP29376 864 aa13□□□□□ -0.33
RTTN-208ENST00000581709 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
RTTN-208ENST00000581709 TRPM2O94759 1503 aa12.98□□□□□ -0.33
RTTN-208ENST00000581709 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
RTTN-208ENST00000581709 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
RTTN-208ENST00000581709 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
RTTN-208ENST00000581709 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.34
RTTN-208ENST00000581709 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
RTTN-208ENST00000581709 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
RTTN-208ENST00000581709 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
RTTN-208ENST00000581709 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
RTTN-208ENST00000581709 ARHGAP23Q9P227 1491 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms