RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 FOXD4L5Q5VV16 416 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-217ENST00000581241 FOXD4L4Q8WXT5 416 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-217ENST00000581241 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
CSNK1D-217ENST00000581241 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
CSNK1D-217ENST00000581241 GORABQ5T7V8 394 aa17.99■□□□□ 0.47
CSNK1D-217ENST00000581241 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
CSNK1D-217ENST00000581241 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
CSNK1D-217ENST00000581241 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
CSNK1D-217ENST00000581241 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
CSNK1D-217ENST00000581241 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
CSNK1D-217ENST00000581241 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
CSNK1D-217ENST00000581241 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
CSNK1D-217ENST00000581241 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
CSNK1D-217ENST00000581241 CRBNQ96SW2 442 aa17.97■□□□□ 0.47
CSNK1D-217ENST00000581241 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
CSNK1D-217ENST00000581241 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
CSNK1D-217ENST00000581241 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
CSNK1D-217ENST00000581241 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 GOLGA6L19H0YKK7 550 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 H3BQV1 296 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 ZNF771Q7L3S4 317 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-217ENST00000581241 E9PSI1 815 aa17.93■□□□□ 0.46
CSNK1D-217ENST00000581241 GPS2Q13227 327 aa17.93■□□□□ 0.46
CSNK1D-217ENST00000581241 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-217ENST00000581241 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
CSNK1D-217ENST00000581241 GGT6Q6P531 493 aa17.92■□□□□ 0.46
CSNK1D-217ENST00000581241 PLIN1O60240 522 aa17.91■□□□□ 0.46
CSNK1D-217ENST00000581241 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
CSNK1D-217ENST00000581241 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-217ENST00000581241 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
CSNK1D-217ENST00000581241 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
CSNK1D-217ENST00000581241 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-217ENST00000581241 MLECQ14165 292 aa17.89■□□□□ 0.45
CSNK1D-217ENST00000581241 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
CSNK1D-217ENST00000581241 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
CSNK1D-217ENST00000581241 CGNL1Q0VF96 1302 aa17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 BECN2A8MW95 431 aa17.88■□□□□ 0.45
CSNK1D-217ENST00000581241 CCDC70Q6NSX1 233 aa17.87■□□□□ 0.45
CSNK1D-217ENST00000581241 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
CSNK1D-217ENST00000581241 PANK3Q9H999 370 aa17.87■□□□□ 0.45
CSNK1D-217ENST00000581241 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
CSNK1D-217ENST00000581241 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
CSNK1D-217ENST00000581241 PRKRIP1Q9H875 184 aaPredicted RBP17.86■□□□□ 0.45
CSNK1D-217ENST00000581241 TPM1P09493 284 aa17.86■□□□□ 0.45
CSNK1D-217ENST00000581241 TPM2P07951 284 aa17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 CCAR2Q8N163 923 aaKnown RBP17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 TEX35Q5T0J7 233 aa17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 ZNF592Q92610 1267 aa17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 CEP89Q96ST8 783 aa17.85■□□□□ 0.45
CSNK1D-217ENST00000581241 PDE4CQ08493 712 aa17.82■□□□□ 0.44
CSNK1D-217ENST00000581241 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
CSNK1D-217ENST00000581241 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-217ENST00000581241 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 FAM13BQ9NYF5 915 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 REC8O95072 547 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
CSNK1D-217ENST00000581241 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
CSNK1D-217ENST00000581241 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
CSNK1D-217ENST00000581241 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
CSNK1D-217ENST00000581241 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
CSNK1D-217ENST00000581241 USP47Q96K76 1375 aa17.79■□□□□ 0.44
CSNK1D-217ENST00000581241 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
CSNK1D-217ENST00000581241 CCDC144AA2RUR9 1427 aa17.79■□□□□ 0.44
CSNK1D-217ENST00000581241 HNRNPMP52272 730 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■■ 31.3
CSNK1D-217ENST00000581241 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
CSNK1D-217ENST00000581241 AMPHP49418 695 aa17.78■□□□□ 0.44
CSNK1D-217ENST00000581241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.442e-7■■□□□ 13.2
CSNK1D-217ENST00000581241 DIAPH3Q9NSV4 1193 aa17.78■□□□□ 0.44
CSNK1D-217ENST00000581241 MARCH6O60337 910 aa17.77■□□□□ 0.44
CSNK1D-217ENST00000581241 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
CSNK1D-217ENST00000581241 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
CSNK1D-217ENST00000581241 ANO2Q9NQ90 1003 aa17.77■□□□□ 0.44
CSNK1D-217ENST00000581241 MCTP1Q6DN14 999 aa17.77■□□□□ 0.43
CSNK1D-217ENST00000581241 ROCK1Q13464 1354 aa17.76■□□□□ 0.43
CSNK1D-217ENST00000581241 NUCB2P80303 420 aa17.76■□□□□ 0.43
CSNK1D-217ENST00000581241 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
CSNK1D-217ENST00000581241 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-217ENST00000581241 KIF3BO15066 747 aa17.74■□□□□ 0.43
CSNK1D-217ENST00000581241 WIZO95785 1651 aa17.74■□□□□ 0.43
CSNK1D-217ENST00000581241 NFKBIBQ15653 356 aa17.74■□□□□ 0.43
CSNK1D-217ENST00000581241 HOMER1Q86YM7 354 aa17.73■□□□□ 0.43
CSNK1D-217ENST00000581241 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-217ENST00000581241 SYNE3Q6ZMZ3 975 aa17.73■□□□□ 0.43
CSNK1D-217ENST00000581241 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms