RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	TRAPPC8	Q9Y2L5	1435 aa		14.11	□□□□□ -0.15
TRIM16-222	ENST00000581224	EIF2AK4	Q9P2K8	1649 aa	Known RBP	14.11	□□□□□ -0.15
TRIM16-222	ENST00000581224	ATP7A	Q04656	1500 aa		14.1	□□□□□ -0.15
TRIM16-222	ENST00000581224	ZFYVE16	Q7Z3T8	1539 aa		14.1	□□□□□ -0.15
TRIM16-222	ENST00000581224	ARHGEF40	Q8TER5	1519 aa		14.1	□□□□□ -0.15
TRIM16-222	ENST00000581224	FAM135A	Q9P2D6	1515 aa		14.1	□□□□□ -0.15
TRIM16-222	ENST00000581224	MAGI2	Q86UL8	1455 aa		14.09	□□□□□ -0.15
TRIM16-222	ENST00000581224	ZMYM4	Q5VZL5	1548 aa		14.09	□□□□□ -0.15
TRIM16-222	ENST00000581224	KANK1	Q14678	1352 aa		14.09	□□□□□ -0.15
TRIM16-222	ENST00000581224	AFAP1	Q8N556	730 aa		14.06	□□□□□ -0.16
TRIM16-222	ENST00000581224	ARID4B	Q4LE39	1312 aa	Predicted RBP	14.06	□□□□□ -0.16
TRIM16-222	ENST00000581224	MLH3	Q9UHC1	1453 aa		14.06	□□□□□ -0.16
TRIM16-222	ENST00000581224	HECW2	Q9P2P5	1572 aa		14.05	□□□□□ -0.16
TRIM16-222	ENST00000581224	DHX29	Q7Z478	1369 aa	Known RBP	14.05	□□□□□ -0.16
TRIM16-222	ENST00000581224	YEATS2	Q9ULM3	1422 aa		14.05	□□□□□ -0.16
TRIM16-222	ENST00000581224	DEPDC5	O75140	1603 aa		14.04	□□□□□ -0.16
TRIM16-222	ENST00000581224	L3MBTL2	Q969R5	705 aa		14.04	□□□□□ -0.16
TRIM16-222	ENST00000581224	ATP10A	O60312	1499 aa		14.04	□□□□□ -0.16
TRIM16-222	ENST00000581224	KDM5C	P41229	1560 aa		14.04	□□□□□ -0.16
TRIM16-222	ENST00000581224	STAC3	Q96MF2	364 aa		14.03	□□□□□ -0.16
TRIM16-222	ENST00000581224	KDM4F	A0A1W2PPD8	638 aa		14.02	□□□□□ -0.17
TRIM16-222	ENST00000581224	FOXD1	Q16676	465 aa		14.02	□□□□□ -0.17
TRIM16-222	ENST00000581224	KIDINS220	Q9ULH0	1771 aa		14.01	□□□□□ -0.17
TRIM16-222	ENST00000581224	CCDC144A	A2RUR9	1427 aa		14.01	□□□□□ -0.17
TRIM16-222	ENST00000581224	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
TRIM16-222	ENST00000581224	EIF4G2	P78344	907 aa	Known RBP eCLIP	14	□□□□□ -0.17
TRIM16-222	ENST00000581224	TET3	O43151	1660 aa		14	□□□□□ -0.17
TRIM16-222	ENST00000581224	ABCA6	Q8N139	1617 aa		14	□□□□□ -0.17
TRIM16-222	ENST00000581224	BCORL1	Q5H9F3	1711 aa		13.99	□□□□□ -0.17
TRIM16-222	ENST00000581224	DIP2C	Q9Y2E4	1556 aa		13.99	□□□□□ -0.17
TRIM16-222	ENST00000581224	SIGLEC1	Q9BZZ2	1709 aa		13.98	□□□□□ -0.17
TRIM16-222	ENST00000581224	A2M	P01023	1474 aa		13.98	□□□□□ -0.17
TRIM16-222	ENST00000581224	MLEC	Q14165	292 aa		13.97	□□□□□ -0.17
TRIM16-222	ENST00000581224	UHRF1BP1	Q6BDS2	1440 aa		13.97	□□□□□ -0.17
TRIM16-222	ENST00000581224	PRDM15	P57071	1507 aa	Predicted RBP	13.96	□□□□□ -0.17
TRIM16-222	ENST00000581224	RNF17	Q9BXT8	1623 aa	Known RBP	13.96	□□□□□ -0.17
TRIM16-222	ENST00000581224	VWDE	Q8N2E2	1590 aa		13.96	□□□□□ -0.18
TRIM16-222	ENST00000581224	KIF3B	O15066	747 aa		13.95	□□□□□ -0.18
TRIM16-222	ENST00000581224	MADD	Q8WXG6	1647 aa		13.94	□□□□□ -0.18
TRIM16-222	ENST00000581224	SPHKAP	Q2M3C7	1700 aa		13.93	□□□□□ -0.18
TRIM16-222	ENST00000581224	ADAMTSL3	P82987	1691 aa		13.93	□□□□□ -0.18
TRIM16-222	ENST00000581224	RIMS1	Q86UR5	1692 aa	Known RBP	13.93	□□□□□ -0.18
TRIM16-222	ENST00000581224	LMTK2	Q8IWU2	1503 aa		13.93	□□□□□ -0.18
TRIM16-222	ENST00000581224	FER1L4	A9Z1Z3	1794 aa		13.93	□□□□□ -0.18
TRIM16-222	ENST00000581224	NEURL4	Q96JN8	1562 aa		13.92	□□□□□ -0.18
TRIM16-222	ENST00000581224		E9PCH4	1651 aa		13.92	□□□□□ -0.18
TRIM16-222	ENST00000581224	PLPPR3	Q6T4P5	718 aa		13.92	□□□□□ -0.18
TRIM16-222	ENST00000581224	PTPRT	O14522	1441 aa		13.91	□□□□□ -0.18
TRIM16-222	ENST00000581224	TRPM2	O94759	1503 aa		13.91	□□□□□ -0.18
TRIM16-222	ENST00000581224	RERE	Q9P2R6	1566 aa		13.91	□□□□□ -0.18
TRIM16-222	ENST00000581224	POLR1A	O95602	1720 aa	Predicted RBP	13.9	□□□□□ -0.18
TRIM16-222	ENST00000581224	CEP152	O94986	1710 aa		13.9	□□□□□ -0.18
TRIM16-222	ENST00000581224	RALGAPB	Q86X10	1494 aa		13.89	□□□□□ -0.19
TRIM16-222	ENST00000581224	CENPB	P07199	599 aa	Predicted RBP	13.89	□□□□□ -0.19
TRIM16-222	ENST00000581224	PPP6R1	Q9UPN7	881 aa		13.89	□□□□□ -0.19
TRIM16-222	ENST00000581224	ZC3H13	Q5T200	1668 aa	Known RBP	13.88	□□□□□ -0.19
TRIM16-222	ENST00000581224	PLA2R1	Q13018	1463 aa		13.88	□□□□□ -0.19
TRIM16-222	ENST00000581224	HSPA5	P11021	654 aa	Known RBP	13.88	□□□□□ -0.19
TRIM16-222	ENST00000581224	DCAF11	Q8TEB1	546 aa		13.88	□□□□□ -0.19
TRIM16-222	ENST00000581224	EFCAB6	Q5THR3	1501 aa		13.88	□□□□□ -0.19
TRIM16-222	ENST00000581224	MROH1	Q8NDA8	1641 aa		13.87	□□□□□ -0.19
TRIM16-222	ENST00000581224	NBPF8	Q3BBV2	869 aa		13.87	□□□□□ -0.19
TRIM16-222	ENST00000581224	MIER1	Q8N108	512 aa		13.87	□□□□□ -0.19
TRIM16-222	ENST00000581224	PTPRM	P28827	1452 aa		13.87	□□□□□ -0.19
TRIM16-222	ENST00000581224	KIF1B	O60333	1816 aa		13.86	□□□□□ -0.19
TRIM16-222	ENST00000581224	AGL	P35573	1532 aa		13.85	□□□□□ -0.19
TRIM16-222	ENST00000581224	ESF1	Q9H501	851 aa	Known RBP	13.85	□□□□□ -0.19
TRIM16-222	ENST00000581224	LAMC1	P11047	1609 aa		13.85	□□□□□ -0.19
TRIM16-222	ENST00000581224	SPATA31E1	Q6ZUB1	1445 aa		13.84	□□□□□ -0.19
TRIM16-222	ENST00000581224	SLC24A1	O60721	1099 aa		13.84	□□□□□ -0.19
TRIM16-222	ENST00000581224	DDX10	Q13206	875 aa	Known RBP	13.84	□□□□□ -0.19
TRIM16-222	ENST00000581224	WASHC2C	Q9Y4E1	1318 aa		13.84	□□□□□ -0.19
TRIM16-222	ENST00000581224	ANP32C	O43423	234 aa		13.83	□□□□□ -0.2
TRIM16-222	ENST00000581224	ZNF326	Q5BKZ1	582 aa	Known RBP	13.82	□□□□□ -0.2
TRIM16-222	ENST00000581224	CARD11	Q9BXL7	1154 aa		13.82	□□□□□ -0.2
TRIM16-222	ENST00000581224	KDM2A	Q9Y2K7	1162 aa		13.82	□□□□□ -0.2
TRIM16-222	ENST00000581224	TRPM1	Q7Z4N2	1603 aa		13.82	□□□□□ -0.2
TRIM16-222	ENST00000581224	ARHGAP31	Q2M1Z3	1444 aa		13.81	□□□□□ -0.2
TRIM16-222	ENST00000581224	PRAG1	Q86YV5	1406 aa		13.81	□□□□□ -0.2
TRIM16-222	ENST00000581224	CNTLN	Q9NXG0	1405 aa		13.81	□□□□□ -0.2
TRIM16-222	ENST00000581224	GGT6	Q6P531	493 aa		13.81	□□□□□ -0.2
TRIM16-222	ENST00000581224	USP47	Q96K76	1375 aa		13.81	□□□□□ -0.2
TRIM16-222	ENST00000581224	RGL3	Q3MIN7	710 aa		13.8	□□□□□ -0.2
TRIM16-222	ENST00000581224	ROCK2	O75116	1388 aa	Known RBP	13.8	□□□□□ -0.2
TRIM16-222	ENST00000581224	CLTCL1	P53675	1640 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	CLTC	Q00610	1675 aa	Known RBP	13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	KIAA1210	Q9ULL0	1709 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	CCER2	I3L3R5	266 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	GPRASP1	Q5JY77	1395 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	ABCC3	O15438	1527 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	CAMSAP1	Q5T5Y3	1602 aa		13.79	□□□□□ -0.2
TRIM16-222	ENST00000581224	RPGRIP1L	Q68CZ1	1315 aa		13.78	□□□□□ -0.2
TRIM16-222	ENST00000581224	CCDC7	Q96M83	1385 aa		13.78	□□□□□ -0.2
TRIM16-222	ENST00000581224	C3	P01024	1663 aa		13.77	□□□□□ -0.21
TRIM16-222	ENST00000581224	CEBPA	P49715	358 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM16-222	ENST00000581224	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM16-222	ENST00000581224	WASHC2A	Q641Q2	1341 aa		13.76	□□□□□ -0.21
TRIM16-222	ENST00000581224	SLC52A1	Q9NWF4	448 aa		13.75	□□□□□ -0.21
TRIM16-222	ENST00000581224	MROH2A	A6NES4	1674 aa		13.75	□□□□□ -0.21
TRIM16-222	ENST00000581224	MYOM2	P54296	1465 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms