RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 KDM5DQ9BY66 1539 aa33.27■■■□□ 2.92
CSNK1D-216ENST00000581108 NCOA1Q15788 1441 aa33.27■■■□□ 2.92
CSNK1D-216ENST00000581108 FBXO31Q5XUX0 539 aaPredicted RBP33.25■■■□□ 2.91
CSNK1D-216ENST00000581108 ZNF142P52746 1687 aaPredicted RBP33.24■■■□□ 2.91
CSNK1D-216ENST00000581108 PTPRTO14522 1441 aa33.24■■■□□ 2.91
CSNK1D-216ENST00000581108 FAM135AQ9P2D6 1515 aa33.23■■■□□ 2.91
CSNK1D-216ENST00000581108 CEP170BQ9Y4F5 1589 aaPredicted RBP33.22■■■□□ 2.91
CSNK1D-216ENST00000581108 ABCC5O15440 1437 aa33.21■■■□□ 2.91
CSNK1D-216ENST00000581108 FGD6Q6ZV73 1430 aa33.21■■■□□ 2.91
CSNK1D-216ENST00000581108 RNF17Q9BXT8 1623 aaKnown RBP33.2■■■□□ 2.9
CSNK1D-216ENST00000581108 CROCC2H7BZ55 1655 aa33.19■■■□□ 2.9
CSNK1D-216ENST00000581108 PZPP20742 1482 aa33.18■■■□□ 2.9
CSNK1D-216ENST00000581108 NCKAP5LQ9HCH0 1330 aa33.18■■■□□ 2.9
CSNK1D-216ENST00000581108 EIF2AK4Q9P2K8 1649 aaKnown RBP33.17■■■□□ 2.9
CSNK1D-216ENST00000581108 TCOF1Q13428 1488 aaKnown RBP33.17■■■□□ 2.9
CSNK1D-216ENST00000581108 TNRQ92752 1358 aa33.15■■■□□ 2.9
CSNK1D-216ENST00000581108 DUOX2Q9NRD8 1548 aa33.15■■■□□ 2.9
CSNK1D-216ENST00000581108 DNMT1P26358 1616 aaKnown RBP33.14■■■□□ 2.9
CSNK1D-216ENST00000581108 SHANK2Q9UPX8 1470 aa33.14■■■□□ 2.9
CSNK1D-216ENST00000581108 DAPK1P53355 1430 aa33.14■■■□□ 2.9
CSNK1D-216ENST00000581108 RRP7BPQ9NSQ0 103 aa33.14■■■□□ 2.9
CSNK1D-216ENST00000581108 A2ML1A8K2U0 1454 aa33.13■■■□□ 2.89
CSNK1D-216ENST00000581108 KIF15Q9NS87 1388 aa33.12■■■□□ 2.89
CSNK1D-216ENST00000581108 ABCC3O15438 1527 aa33.11■■■□□ 2.89
CSNK1D-216ENST00000581108 PLA2R1Q13018 1463 aa33.11■■■□□ 2.89
CSNK1D-216ENST00000581108 MROH1Q8NDA8 1641 aa33.1■■■□□ 2.89
CSNK1D-216ENST00000581108 ZC3H13Q5T200 1668 aaKnown RBP33.08■■■□□ 2.89
CSNK1D-216ENST00000581108 PKD2Q13563 968 aa33.08■■■□□ 2.89
CSNK1D-216ENST00000581108 CHIC2Q9UKJ5 165 aa33.08■■■□□ 2.89
CSNK1D-216ENST00000581108 CEP152O94986 1710 aa33.05■■■□□ 2.88
CSNK1D-216ENST00000581108 CFAP65Q6ZU64 1925 aaKnown RBP33.04■■■□□ 2.88
CSNK1D-216ENST00000581108 ERBINQ96RT1 1412 aa33.02■■■□□ 2.88
CSNK1D-216ENST00000581108 LTBP4Q8N2S1 1624 aa33.02■■■□□ 2.88
CSNK1D-216ENST00000581108 FAM50AQ14320 339 aaKnown RBP33.01■■■□□ 2.87
CSNK1D-216ENST00000581108 ANKRD30AQ9BXX3 1397 aa33■■■□□ 2.87
CSNK1D-216ENST00000581108 NLRP1Q9C000 1473 aa32.99■■■□□ 2.87
CSNK1D-216ENST00000581108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.97■■■□□ 2.87
CSNK1D-216ENST00000581108 SPATA31D1Q6ZQQ2 1576 aa32.96■■■□□ 2.87
CSNK1D-216ENST00000581108 THEMISQ8N1K5 641 aaPredicted RBP32.95■■■□□ 2.87
CSNK1D-216ENST00000581108 PRDM15P57071 1507 aaPredicted RBP32.95■■■□□ 2.87
CSNK1D-216ENST00000581108 ZNF335Q9H4Z2 1342 aaPredicted RBP32.95■■■□□ 2.86
CSNK1D-216ENST00000581108 ERVK-7P63135 1459 aa32.94■■■□□ 2.86
CSNK1D-216ENST00000581108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.94■■■□□ 2.86
CSNK1D-216ENST00000581108 UGGT1Q9NYU2 1555 aa32.93■■■□□ 2.86
CSNK1D-216ENST00000581108 POLR1AO95602 1720 aaPredicted RBP32.93■■■□□ 2.86
CSNK1D-216ENST00000581108 DEPDC5O75140 1603 aa32.92■■■□□ 2.86
CSNK1D-216ENST00000581108 NEURL4Q96JN8 1562 aa32.88■■■□□ 2.85
CSNK1D-216ENST00000581108 ADGRL2O95490 1459 aa32.88■■■□□ 2.85
CSNK1D-216ENST00000581108 ANKLE2Q86XL3 938 aa32.88■■■□□ 2.85
CSNK1D-216ENST00000581108 ARHGAP31Q2M1Z3 1444 aa32.86■■■□□ 2.85
CSNK1D-216ENST00000581108 KANK1Q14678 1352 aa32.86■■■□□ 2.85
CSNK1D-216ENST00000581108 PPARGC1BQ86YN6 1023 aaKnown RBP32.85■■■□□ 2.85
CSNK1D-216ENST00000581108 IQSEC2Q5JU85 1478 aa32.81■■■□□ 2.84
CSNK1D-216ENST00000581108 VWDEQ8N2E2 1590 aa32.79■■■□□ 2.84
CSNK1D-216ENST00000581108 UBR1Q8IWV7 1749 aa32.78■■■□□ 2.84
CSNK1D-216ENST00000581108 LMTK2Q8IWU2 1503 aa32.77■■■□□ 2.84
CSNK1D-216ENST00000581108 ANKRD50Q9ULJ7 1429 aa32.76■■■□□ 2.83
CSNK1D-216ENST00000581108 MED14O60244 1454 aa32.75■■■□□ 2.83
CSNK1D-216ENST00000581108 NPHP4O75161 1426 aaPredicted RBP32.75■■■□□ 2.83
CSNK1D-216ENST00000581108 IQGAP1P46940 1657 aa32.7■■■□□ 2.83
CSNK1D-216ENST00000581108 PIK3C2BO00750 1634 aa32.68■■■□□ 2.82
CSNK1D-216ENST00000581108 ITGAEP38570 1179 aa32.67■■■□□ 2.82
CSNK1D-216ENST00000581108 EFCAB6Q5THR3 1501 aa32.67■■■□□ 2.82
CSNK1D-216ENST00000581108 IDI1Q13907 227 aa32.65■■■□□ 2.82
CSNK1D-216ENST00000581108 UBAP1LF5GYI3 381 aa32.64■■■□□ 2.82
CSNK1D-216ENST00000581108 ROCK1Q13464 1354 aa32.63■■■□□ 2.81
CSNK1D-216ENST00000581108 LTKP29376 864 aa32.63■■■□□ 2.81
CSNK1D-216ENST00000581108 SYNMO15061 1565 aa32.62■■■□□ 2.81
CSNK1D-216ENST00000581108 CPS1P31327 1500 aa32.62■■■□□ 2.81
CSNK1D-216ENST00000581108 ARHGAP23Q9P227 1491 aa32.62■■■□□ 2.81
CSNK1D-216ENST00000581108 TXNDC2Q86VQ3 553 aa32.62■■■□□ 2.81
CSNK1D-216ENST00000581108 STAG3Q9UJ98 1225 aa32.62■■■□□ 2.81
CSNK1D-216ENST00000581108 SLIT1O75093 1534 aa32.61■■■□□ 2.81
CSNK1D-216ENST00000581108 SCAF11Q99590 1463 aaKnown RBP32.61■■■□□ 2.81
CSNK1D-216ENST00000581108 NOS1P29475 1434 aa32.6■■■□□ 2.81
CSNK1D-216ENST00000581108 UNC13BO14795 1591 aa32.57■■■□□ 2.8
CSNK1D-216ENST00000581108 TET3O43151 1660 aa32.56■■■□□ 2.8
CSNK1D-216ENST00000581108 EID1Q9Y6B2 187 aa32.56■■■□□ 2.8
CSNK1D-216ENST00000581108 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
CSNK1D-216ENST00000581108 TMEM2Q9UHN6 1383 aa32.55■■■□□ 2.8
CSNK1D-216ENST00000581108 STRCP1A6NGW2 1772 aa32.55■■■□□ 2.8
CSNK1D-216ENST00000581108 RPRD2Q5VT52 1461 aaKnown RBP32.54■■■□□ 2.8
CSNK1D-216ENST00000581108 SLC52A1Q9NWF4 448 aa32.52■■■□□ 2.8
CSNK1D-216ENST00000581108 GCC2Q8IWJ2 1684 aa32.52■■■□□ 2.8
CSNK1D-216ENST00000581108 ADGRB3O60242 1522 aa32.46■■■□□ 2.79
CSNK1D-216ENST00000581108 IQGAP3Q86VI3 1631 aa32.45■■■□□ 2.79
CSNK1D-216ENST00000581108 E9PCH4 1651 aa32.45■■■□□ 2.79
CSNK1D-216ENST00000581108 NUP155O75694 1391 aa32.45■■■□□ 2.78
CSNK1D-216ENST00000581108 TOM1O60784 492 aa32.44■■■□□ 2.78
CSNK1D-216ENST00000581108 RRBP1Q9P2E9 1410 aaKnown RBP32.43■■■□□ 2.78
CSNK1D-216ENST00000581108 LRRC7Q96NW7 1537 aa32.43■■■□□ 2.78
CSNK1D-216ENST00000581108 MYO5BQ9ULV0 1848 aa32.42■■■□□ 2.78
CSNK1D-216ENST00000581108 PIP4K2BP78356 416 aa32.42■■■□□ 2.78
CSNK1D-216ENST00000581108 SCAF1Q9H7N4 1312 aaKnown RBP32.41■■■□□ 2.78
CSNK1D-216ENST00000581108 SLC26A8Q96RN1 970 aa32.36■■■□□ 2.77
CSNK1D-216ENST00000581108 TMEM131LA2VDJ0 1609 aa32.35■■■□□ 2.77
CSNK1D-216ENST00000581108 ALKQ9UM73 1620 aa32.33■■■□□ 2.77
CSNK1D-216ENST00000581108 DISP3Q9P2K9 1392 aa32.32■■■□□ 2.77
CSNK1D-216ENST00000581108 CHGAP10645 457 aaKnown RBP32.32■■■□□ 2.76
CSNK1D-216ENST00000581108 BCANQ96GW7 911 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms