RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
SENP3-205ENST00000581010 HFM1A2PYH4 1435 aa11.02□□□□□ -0.64
SENP3-205ENST00000581010 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.64
SENP3-205ENST00000581010 HNRNPMP52272 730 aaKnown RBP eCLIP11.02□□□□□ -0.65
SENP3-205ENST00000581010 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
SENP3-205ENST00000581010 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
SENP3-205ENST00000581010 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
SENP3-205ENST00000581010 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
SENP3-205ENST00000581010 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
SENP3-205ENST00000581010 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
SENP3-205ENST00000581010 DIP2CQ9Y2E4 1556 aa11□□□□□ -0.65
SENP3-205ENST00000581010 SETD1AO15047 1707 aaKnown RBP10.99□□□□□ -0.65
SENP3-205ENST00000581010 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
SENP3-205ENST00000581010 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
SENP3-205ENST00000581010 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
SENP3-205ENST00000581010 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
SENP3-205ENST00000581010 ACIN1Q9UKV3 1341 aaKnown RBP10.98□□□□□ -0.65
SENP3-205ENST00000581010 NAIPQ13075 1403 aa10.98□□□□□ -0.65
SENP3-205ENST00000581010 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
SENP3-205ENST00000581010 MBD5Q9P267 1494 aa10.98□□□□□ -0.65
SENP3-205ENST00000581010 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
SENP3-205ENST00000581010 MYO3AQ8NEV4 1616 aa10.97□□□□□ -0.65
SENP3-205ENST00000581010 PLXNC1O60486 1568 aa10.96□□□□□ -0.65
SENP3-205ENST00000581010 TRIM52Q96A61 297 aa10.96□□□□□ -0.65
SENP3-205ENST00000581010 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
SENP3-205ENST00000581010 REREQ9P2R6 1566 aa10.95□□□□□ -0.66
SENP3-205ENST00000581010 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
SENP3-205ENST00000581010 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
SENP3-205ENST00000581010 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
SENP3-205ENST00000581010 HRCP23327 699 aa10.95□□□□□ -0.66
SENP3-205ENST00000581010 KDM5CP41229 1560 aa10.94□□□□□ -0.66
SENP3-205ENST00000581010 TOM1O60784 492 aa10.94□□□□□ -0.66
SENP3-205ENST00000581010 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
SENP3-205ENST00000581010 RGS17Q9UGC6 210 aaPredicted RBP10.94□□□□□ -0.66
SENP3-205ENST00000581010 MROH2AA6NES4 1674 aa10.94□□□□□ -0.66
SENP3-205ENST00000581010 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
SENP3-205ENST00000581010 POLR1AO95602 1720 aaPredicted RBP10.93□□□□□ -0.66
SENP3-205ENST00000581010 INO80Q9ULG1 1556 aaPredicted RBP10.93□□□□□ -0.66
SENP3-205ENST00000581010 AGLP35573 1532 aa10.93□□□□□ -0.66
SENP3-205ENST00000581010 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
SENP3-205ENST00000581010 DHX57Q6P158 1386 aaKnown RBP10.92□□□□□ -0.66
SENP3-205ENST00000581010 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
SENP3-205ENST00000581010 DUOX2Q9NRD8 1548 aa10.92□□□□□ -0.66
SENP3-205ENST00000581010 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
SENP3-205ENST00000581010 PPP6R1Q9UPN7 881 aa10.91□□□□□ -0.66
SENP3-205ENST00000581010 CLTCQ00610 1675 aaKnown RBP10.91□□□□□ -0.66
SENP3-205ENST00000581010 RTEL1-TNFRSF6BF6WH68 1400 aa10.91□□□□□ -0.66
SENP3-205ENST00000581010 CPS1P31327 1500 aa10.9□□□□□ -0.66
SENP3-205ENST00000581010 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
SENP3-205ENST00000581010 NPATQ14207 1427 aa10.9□□□□□ -0.66
SENP3-205ENST00000581010 CLSPNQ9HAW4 1339 aa10.89□□□□□ -0.67
SENP3-205ENST00000581010 PKD2Q13563 968 aa10.89□□□□□ -0.67
SENP3-205ENST00000581010 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
SENP3-205ENST00000581010 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
SENP3-205ENST00000581010 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
SENP3-205ENST00000581010 NEURL4Q96JN8 1562 aa10.87□□□□□ -0.67
SENP3-205ENST00000581010 POTEAQ6S8J7 498 aa10.86□□□□□ -0.67
SENP3-205ENST00000581010 EIF2AK4Q9P2K8 1649 aaKnown RBP10.86□□□□□ -0.67
SENP3-205ENST00000581010 UNC13BO14795 1591 aa10.86□□□□□ -0.67
SENP3-205ENST00000581010 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
SENP3-205ENST00000581010 MLH3Q9UHC1 1453 aa10.85□□□□□ -0.67
SENP3-205ENST00000581010 VWDEQ8N2E2 1590 aa10.85□□□□□ -0.67
SENP3-205ENST00000581010 STRCP1A6NGW2 1772 aa10.85□□□□□ -0.67
SENP3-205ENST00000581010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
SENP3-205ENST00000581010 NUP155O75694 1391 aa10.84□□□□□ -0.67
SENP3-205ENST00000581010 ZMYM3Q14202 1370 aa10.84□□□□□ -0.67
SENP3-205ENST00000581010 A2MP01023 1474 aa10.83□□□□□ -0.68
SENP3-205ENST00000581010 KANK1Q14678 1352 aa10.83□□□□□ -0.68
SENP3-205ENST00000581010 MPHOSPH9Q99550 1183 aa10.83□□□□□ -0.68
SENP3-205ENST00000581010 RNF17Q9BXT8 1623 aaKnown RBP10.83□□□□□ -0.68
SENP3-205ENST00000581010 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
SENP3-205ENST00000581010 IQGAP3Q86VI3 1631 aa10.81□□□□□ -0.68
SENP3-205ENST00000581010 FAM135AQ9P2D6 1515 aa10.81□□□□□ -0.68
SENP3-205ENST00000581010 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
SENP3-205ENST00000581010 KIF3BO15066 747 aa10.8□□□□□ -0.68
SENP3-205ENST00000581010 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
SENP3-205ENST00000581010 PZPP20742 1482 aa10.8□□□□□ -0.68
SENP3-205ENST00000581010 DEPDC5O75140 1603 aa10.8□□□□□ -0.68
SENP3-205ENST00000581010 A2ML1A8K2U0 1454 aa10.79□□□□□ -0.68
SENP3-205ENST00000581010 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
SENP3-205ENST00000581010 PRDM15P57071 1507 aaPredicted RBP10.77□□□□□ -0.69
SENP3-205ENST00000581010 SYNMO15061 1565 aa10.77□□□□□ -0.69
SENP3-205ENST00000581010 XIRP1Q702N8 1843 aaKnown RBP10.77□□□□□ -0.69
SENP3-205ENST00000581010 TET3O43151 1660 aa10.76□□□□□ -0.69
SENP3-205ENST00000581010 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
SENP3-205ENST00000581010 FOXD1Q16676 465 aa10.76□□□□□ -0.69
SENP3-205ENST00000581010 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
SENP3-205ENST00000581010 CEP152O94986 1710 aa10.75□□□□□ -0.69
SENP3-205ENST00000581010 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
SENP3-205ENST00000581010 GGT6Q6P531 493 aa10.74□□□□□ -0.69
SENP3-205ENST00000581010 SIN3AQ96ST3 1273 aa10.74□□□□□ -0.69
SENP3-205ENST00000581010 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
SENP3-205ENST00000581010 E9PCH4 1651 aa10.73□□□□□ -0.69
SENP3-205ENST00000581010 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
SENP3-205ENST00000581010 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
SENP3-205ENST00000581010 MROH1Q8NDA8 1641 aa10.72□□□□□ -0.69
SENP3-205ENST00000581010 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
SENP3-205ENST00000581010 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
SENP3-205ENST00000581010 WASHC2CQ9Y4E1 1318 aa10.71□□□□□ -0.69
SENP3-205ENST00000581010 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms