RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
IFT20-211ENST00000580991 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
IFT20-211ENST00000580991 ANKLE2Q86XL3 938 aa23.93■■□□□ 1.42
IFT20-211ENST00000580991 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
IFT20-211ENST00000580991 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
IFT20-211ENST00000580991 PZPP20742 1482 aa23.91■■□□□ 1.42
IFT20-211ENST00000580991 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
IFT20-211ENST00000580991 ZNF644Q9H582 1327 aaPredicted RBP23.9■■□□□ 1.42
IFT20-211ENST00000580991 MBD5Q9P267 1494 aa23.9■■□□□ 1.42
IFT20-211ENST00000580991 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
IFT20-211ENST00000580991 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
IFT20-211ENST00000580991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
IFT20-211ENST00000580991 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.41
IFT20-211ENST00000580991 KIF3BO15066 747 aa23.88■■□□□ 1.41
IFT20-211ENST00000580991 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
IFT20-211ENST00000580991 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
IFT20-211ENST00000580991 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
IFT20-211ENST00000580991 MED14O60244 1454 aa23.86■■□□□ 1.41
IFT20-211ENST00000580991 WASHC2CQ9Y4E1 1318 aa23.85■■□□□ 1.41
IFT20-211ENST00000580991 NLRP1Q9C000 1473 aa23.85■■□□□ 1.41
IFT20-211ENST00000580991 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
IFT20-211ENST00000580991 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
IFT20-211ENST00000580991 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
IFT20-211ENST00000580991 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
IFT20-211ENST00000580991 UGGT1Q9NYU2 1555 aa23.84■■□□□ 1.41
IFT20-211ENST00000580991 IQGAP1P46940 1657 aa23.78■■□□□ 1.4
IFT20-211ENST00000580991 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
IFT20-211ENST00000580991 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
IFT20-211ENST00000580991 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
IFT20-211ENST00000580991 LRRC7Q96NW7 1537 aa23.75■■□□□ 1.39
IFT20-211ENST00000580991 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
IFT20-211ENST00000580991 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
IFT20-211ENST00000580991 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
IFT20-211ENST00000580991 SYNMO15061 1565 aa23.74■■□□□ 1.39
IFT20-211ENST00000580991 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
IFT20-211ENST00000580991 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
IFT20-211ENST00000580991 RGS17Q9UGC6 210 aaPredicted RBP23.66■■□□□ 1.38
IFT20-211ENST00000580991 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
IFT20-211ENST00000580991 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
IFT20-211ENST00000580991 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.37
IFT20-211ENST00000580991 ABCC3O15438 1527 aa23.63■■□□□ 1.37
IFT20-211ENST00000580991 ARHGEF5Q12774 1597 aa23.62■■□□□ 1.37
IFT20-211ENST00000580991 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
IFT20-211ENST00000580991 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
IFT20-211ENST00000580991 SCAF11Q99590 1463 aaKnown RBP23.61■■□□□ 1.37
IFT20-211ENST00000580991 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
IFT20-211ENST00000580991 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
IFT20-211ENST00000580991 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
IFT20-211ENST00000580991 XIRP1Q702N8 1843 aaKnown RBP23.54■■□□□ 1.36
IFT20-211ENST00000580991 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
IFT20-211ENST00000580991 LTKP29376 864 aa23.54■■□□□ 1.36
IFT20-211ENST00000580991 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
IFT20-211ENST00000580991 ARHGAP23Q9P227 1491 aa23.53■■□□□ 1.36
IFT20-211ENST00000580991 SLIT1O75093 1534 aa23.53■■□□□ 1.36
IFT20-211ENST00000580991 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
IFT20-211ENST00000580991 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
IFT20-211ENST00000580991 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
IFT20-211ENST00000580991 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
IFT20-211ENST00000580991 CEP152O94986 1710 aa23.5■■□□□ 1.35
IFT20-211ENST00000580991 ARHGAP31Q2M1Z3 1444 aa23.45■■□□□ 1.34
IFT20-211ENST00000580991 TMEM94Q12767 1356 aa23.43■■□□□ 1.34
IFT20-211ENST00000580991 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
IFT20-211ENST00000580991 DUOX2Q9NRD8 1548 aa23.42■■□□□ 1.34
IFT20-211ENST00000580991 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
IFT20-211ENST00000580991 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
IFT20-211ENST00000580991 KCNA6P17658 529 aa23.39■■□□□ 1.33
IFT20-211ENST00000580991 PIK3C2BO00750 1634 aa23.39■■□□□ 1.33
IFT20-211ENST00000580991 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
IFT20-211ENST00000580991 LRRC9Q6ZRR7 1453 aa23.37■■□□□ 1.33
IFT20-211ENST00000580991 PROSER2Q86WR7 435 aaPredicted RBP23.37■■□□□ 1.33
IFT20-211ENST00000580991 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
IFT20-211ENST00000580991 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
IFT20-211ENST00000580991 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
IFT20-211ENST00000580991 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
IFT20-211ENST00000580991 KIF15Q9NS87 1388 aa23.33■■□□□ 1.33
IFT20-211ENST00000580991 ERBINQ96RT1 1412 aa23.33■■□□□ 1.32
IFT20-211ENST00000580991 RBM33Q96EV2 1170 aaKnown RBP23.32■■□□□ 1.32
IFT20-211ENST00000580991 SLC26A8Q96RN1 970 aa23.32■■□□□ 1.32
IFT20-211ENST00000580991 SETD1AO15047 1707 aaKnown RBP23.32■■□□□ 1.32
IFT20-211ENST00000580991 TET3O43151 1660 aa23.32■■□□□ 1.32
IFT20-211ENST00000580991 NKTRP30414 1462 aaKnown RBP23.31■■□□□ 1.32
IFT20-211ENST00000580991 JCADQ9P266 1359 aa23.3■■□□□ 1.32
IFT20-211ENST00000580991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.323e-6■■□□□ 11.7
IFT20-211ENST00000580991 MSH6P52701 1360 aa23.29■■□□□ 1.32
IFT20-211ENST00000580991 KANK1Q14678 1352 aa23.29■■□□□ 1.32
IFT20-211ENST00000580991 IDI1Q13907 227 aa23.29■■□□□ 1.32
IFT20-211ENST00000580991 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
IFT20-211ENST00000580991 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
IFT20-211ENST00000580991 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
IFT20-211ENST00000580991 RRP7BPQ9NSQ0 103 aa23.27■■□□□ 1.32
IFT20-211ENST00000580991 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
IFT20-211ENST00000580991 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
IFT20-211ENST00000580991 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
IFT20-211ENST00000580991 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
IFT20-211ENST00000580991 BCANQ96GW7 911 aa23.22■■□□□ 1.31
IFT20-211ENST00000580991 ABCC5O15440 1437 aa23.21■■□□□ 1.31
IFT20-211ENST00000580991 ADGRB3O60242 1522 aa23.21■■□□□ 1.31
IFT20-211ENST00000580991 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
IFT20-211ENST00000580991 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
IFT20-211ENST00000580991 NOS1P29475 1434 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms